RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 KRT27Q7Z3Y8 459 aa26.23■■□□□ 1.79
HIGD1A-204ENST00000452906 SPATA31A5Q5VU36 1347 aa26.22■■□□□ 1.79
HIGD1A-204ENST00000452906 SPATA31A7Q8IWB4 1347 aa26.22■■□□□ 1.79
HIGD1A-204ENST00000452906 USP6P35125 1406 aa26.22■■□□□ 1.79
HIGD1A-204ENST00000452906 THSD7AQ9UPZ6 1657 aa26.22■■□□□ 1.79
HIGD1A-204ENST00000452906 ABTB2Q8N961 1025 aa26.21■■□□□ 1.79
HIGD1A-204ENST00000452906 USP19O94966 1318 aa26.2■■□□□ 1.79
HIGD1A-204ENST00000452906 FYB1O15117 783 aa26.2■■□□□ 1.78
HIGD1A-204ENST00000452906 FAM98CQ17RN3 349 aaKnown RBP26.19■■□□□ 1.78
HIGD1A-204ENST00000452906 CPDO75976 1380 aa26.19■■□□□ 1.78
HIGD1A-204ENST00000452906 TTC21AQ8NDW8 1320 aa26.18■■□□□ 1.78
HIGD1A-204ENST00000452906 A0A0G2JS52 829 aa26.18■■□□□ 1.78
HIGD1A-204ENST00000452906 MYT1Q01538 1121 aa26.18■■□□□ 1.78
HIGD1A-204ENST00000452906 NUTM2GQ5VZR2 741 aa26.18■■□□□ 1.78
HIGD1A-204ENST00000452906 CFAP53Q96M91 514 aa26.18■■□□□ 1.78
HIGD1A-204ENST00000452906 LMO7Q8WWI1 1683 aa26.17■■□□□ 1.78
HIGD1A-204ENST00000452906 ZC3H6P61129 1189 aaKnown RBP26.16■■□□□ 1.78
HIGD1A-204ENST00000452906 HNRNPUQ00839 825 aaKnown RBP eCLIP26.16■■□□□ 1.78
HIGD1A-204ENST00000452906 SF3B2Q13435 895 aaKnown RBP26.16■■□□□ 1.78
HIGD1A-204ENST00000452906 WDR43Q15061 677 aaKnown RBP eCLIP26.15■■□□□ 1.78
HIGD1A-204ENST00000452906 CHRNA2Q15822 529 aa26.15■■□□□ 1.78
HIGD1A-204ENST00000452906 GGNBP2Q9H3C7 697 aa26.15■■□□□ 1.78
HIGD1A-204ENST00000452906 ZRANB1Q9UGI0 708 aa26.15■■□□□ 1.78
HIGD1A-204ENST00000452906 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.14■■□□□ 1.78
HIGD1A-204ENST00000452906 RGPD1P0DJD0 1748 aa26.14■■□□□ 1.77
HIGD1A-204ENST00000452906 SPATA31A1Q5TZJ5 1347 aa26.14■■□□□ 1.77
HIGD1A-204ENST00000452906 TTC21BQ7Z4L5 1316 aa26.13■■□□□ 1.77
HIGD1A-204ENST00000452906 COG3Q96JB2 828 aa26.12■■□□□ 1.77
HIGD1A-204ENST00000452906 SSH2Q76I76 1423 aa26.12■■□□□ 1.77
HIGD1A-204ENST00000452906 USP54Q70EL1 1684 aa26.12■■□□□ 1.77
HIGD1A-204ENST00000452906 CAMTA1Q9Y6Y1 1673 aa26.12■■□□□ 1.77
HIGD1A-204ENST00000452906 SLIT3O75094 1523 aa26.11■■□□□ 1.77
HIGD1A-204ENST00000452906 PIK3C2AO00443 1686 aa26.11■■□□□ 1.77
HIGD1A-204ENST00000452906 GCP02774 474 aa26.1■■□□□ 1.77
HIGD1A-204ENST00000452906 STRN4Q9NRL3 753 aa26.1■■□□□ 1.77
HIGD1A-204ENST00000452906 AATKQ6ZMQ8 1374 aa26.09■■□□□ 1.77
HIGD1A-204ENST00000452906 ZBED9Q6R2W3 1325 aa26.09■■□□□ 1.77
HIGD1A-204ENST00000452906 MAP2P11137 1827 aaKnown RBP26.07■■□□□ 1.76
HIGD1A-204ENST00000452906 TNNT2P45379 298 aaPredicted RBP26.07■■□□□ 1.76
HIGD1A-204ENST00000452906 EVA1CP58658 441 aa26.07■■□□□ 1.76
HIGD1A-204ENST00000452906 NME9Q86XW9 330 aa26.06■■□□□ 1.76
HIGD1A-204ENST00000452906 OVOS2A0A0J9YW53 1432 aa26.05■■□□□ 1.76
HIGD1A-204ENST00000452906 OVOS2Q6IE36 1432 aa26.05■■□□□ 1.76
HIGD1A-204ENST00000452906 MTHFSP49914 203 aa26.05■■□□□ 1.76
HIGD1A-204ENST00000452906 NLRP6P59044 892 aa26.05■■□□□ 1.76
HIGD1A-204ENST00000452906 BARGINQ6ZT62 677 aa26.05■■□□□ 1.76
HIGD1A-204ENST00000452906 DEFB132Q7Z7B7 95 aa26.05■■□□□ 1.76
HIGD1A-204ENST00000452906 USP31Q70CQ4 1352 aa26.05■■□□□ 1.76
HIGD1A-204ENST00000452906 SMG6Q86US8 1419 aaKnown RBP26.05■■□□□ 1.76
HIGD1A-204ENST00000452906 TNS1Q9HBL0 1735 aaKnown RBP26.04■■□□□ 1.76
HIGD1A-204ENST00000452906 COL5A2P05997 1499 aaPredicted RBP26.04■■□□□ 1.76
HIGD1A-204ENST00000452906 BAG6P46379 1132 aa26.03■■□□□ 1.76
HIGD1A-204ENST00000452906 COL18A1P39060 1754 aa26.02■■□□□ 1.76
HIGD1A-204ENST00000452906 PARP4Q9UKK3 1724 aaKnown RBP26.01■■□□□ 1.75
HIGD1A-204ENST00000452906 THRAP3Q9Y2W1 955 aaKnown RBP26.01■■□□□ 1.75
HIGD1A-204ENST00000452906 LARP1Q6PKG0 1096 aaKnown RBP26■■□□□ 1.75
HIGD1A-204ENST00000452906 TCP11L2Q8N4U5 519 aa26■■□□□ 1.75
HIGD1A-204ENST00000452906 NUDCQ9Y266 331 aa26■■□□□ 1.75
HIGD1A-204ENST00000452906 DISP2A7MBM2 1401 aa25.99■■□□□ 1.75
HIGD1A-204ENST00000452906 USP35Q9P2H5 1018 aa25.99■■□□□ 1.75
HIGD1A-204ENST00000452906 CRB1P82279 1406 aa25.98■■□□□ 1.75
HIGD1A-204ENST00000452906 FAM196AQ6ZSG2 479 aa25.98■■□□□ 1.75
HIGD1A-204ENST00000452906 COL3A1P02461 1466 aaPredicted RBP25.98■■□□□ 1.75
HIGD1A-204ENST00000452906 NGEFQ8N5V2 710 aa25.97■■□□□ 1.75
HIGD1A-204ENST00000452906 KCNH5Q8NCM2 988 aa25.97■■□□□ 1.75
HIGD1A-204ENST00000452906 ADAMTS8Q9UP79 889 aa25.97■■□□□ 1.75
HIGD1A-204ENST00000452906 FAM182BQ5T319 152 aa25.96■■□□□ 1.75
HIGD1A-204ENST00000452906 SRCAPQ6ZRS2 3230 aa25.95■■□□□ 1.75
HIGD1A-204ENST00000452906 WNK3Q9BYP7 1800 aa25.95■■□□□ 1.74
HIGD1A-204ENST00000452906 RGPD5Q99666 1765 aa25.95■■□□□ 1.74
HIGD1A-204ENST00000452906 PDE3BQ13370 1112 aa25.94■■□□□ 1.74
HIGD1A-204ENST00000452906 ABCC6O95255 1503 aa25.93■■□□□ 1.74
HIGD1A-204ENST00000452906 POLKQ9UBT6 870 aa25.93■■□□□ 1.74
HIGD1A-204ENST00000452906 NFAT5O94916 1531 aa25.92■■□□□ 1.74
HIGD1A-204ENST00000452906 ZBTB7CA1YPR0 619 aa25.91■■□□□ 1.74
HIGD1A-204ENST00000452906 DIAPH1O60610 1272 aaKnown RBP25.91■■□□□ 1.74
HIGD1A-204ENST00000452906 PNNQ9H307 717 aaKnown RBP25.91■■□□□ 1.74
HIGD1A-204ENST00000452906 KIF24Q5T7B8 1368 aa25.91■■□□□ 1.74
HIGD1A-204ENST00000452906 ARHGEF25Q86VW2 580 aa25.9■■□□□ 1.74
HIGD1A-204ENST00000452906 LRRC37A3O60309 1634 aa25.89■■□□□ 1.74
HIGD1A-204ENST00000452906 EN1Q05925 392 aaPredicted RBP25.88■■□□□ 1.73
HIGD1A-204ENST00000452906 LRP5O75197 1615 aa25.88■■□□□ 1.73
HIGD1A-204ENST00000452906 WDR17Q8IZU2 1322 aa25.88■■□□□ 1.73
HIGD1A-204ENST00000452906 TRIM37O94972 964 aa25.87■■□□□ 1.73
HIGD1A-204ENST00000452906 TOM1L2Q6ZVM7 507 aa25.86■■□□□ 1.73
HIGD1A-204ENST00000452906 LTN1O94822 1766 aa25.86■■□□□ 1.73
HIGD1A-204ENST00000452906 PEAK1Q9H792 1746 aa25.85■■□□□ 1.73
HIGD1A-204ENST00000452906 SBF2Q86WG5 1849 aa25.85■■□□□ 1.73
HIGD1A-204ENST00000452906 RREB1Q92766 1687 aa25.84■■□□□ 1.73
HIGD1A-204ENST00000452906 PPM1GO15355 546 aaPredicted RBP25.84■■□□□ 1.73
HIGD1A-204ENST00000452906 SOX12O15370 315 aa25.84■■□□□ 1.73
HIGD1A-204ENST00000452906 U2AF1L5P0DN76 240 aaPredicted RBP25.84■■□□□ 1.73
HIGD1A-204ENST00000452906 U2AF1Q01081 240 aaKnown RBP eCLIP25.84■■□□□ 1.73
HIGD1A-204ENST00000452906 RUNDC1Q96C34 613 aa25.84■■□□□ 1.73
HIGD1A-204ENST00000452906 CDCA7Q9BWT1 371 aaPredicted RBP25.84■■□□□ 1.73
HIGD1A-204ENST00000452906 AXIN2Q9Y2T1 843 aa25.84■■□□□ 1.73
HIGD1A-204ENST00000452906 EMILIN1Q9Y6C2 1016 aa25.83■■□□□ 1.73
HIGD1A-204ENST00000452906 RTL1A6NKG5 1358 aa25.82■■□□□ 1.72
HIGD1A-204ENST00000452906 FLT4P35916 1363 aa25.82■■□□□ 1.72
HIGD1A-204ENST00000452906 OVOS2A0A0G2JMS6 1433 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms