RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 MYOM1P52179 1685 aa22.43■■□□□ 1.18
SCAMP4-205ENST00000452128 THRAP3Q9Y2W1 955 aaKnown RBP22.43■■□□□ 1.18
SCAMP4-205ENST00000452128 THSD7AQ9UPZ6 1657 aa22.42■■□□□ 1.18
SCAMP4-205ENST00000452128 KRT27Q7Z3Y8 459 aa22.42■■□□□ 1.18
SCAMP4-205ENST00000452128 TCP11L2Q8N4U5 519 aa22.42■■□□□ 1.18
SCAMP4-205ENST00000452128 ABCC6O95255 1503 aa22.41■■□□□ 1.18
SCAMP4-205ENST00000452128 BRWD3Q6RI45 1802 aa22.41■■□□□ 1.18
SCAMP4-205ENST00000452128 WDR17Q8IZU2 1322 aa22.41■■□□□ 1.18
SCAMP4-205ENST00000452128 FBLN1P23142 703 aa22.41■■□□□ 1.18
SCAMP4-205ENST00000452128 CRB1P82279 1406 aa22.4■■□□□ 1.18
SCAMP4-205ENST00000452128 COG3Q96JB2 828 aa22.4■■□□□ 1.18
SCAMP4-205ENST00000452128 ZBTB7CA1YPR0 619 aa22.39■■□□□ 1.17
SCAMP4-205ENST00000452128 GGNBP2Q9H3C7 697 aa22.39■■□□□ 1.17
SCAMP4-205ENST00000452128 IP6K1Q92551 441 aa22.38■■□□□ 1.17
SCAMP4-205ENST00000452128 CARD10Q9BWT7 1032 aa22.38■■□□□ 1.17
SCAMP4-205ENST00000452128 USP35Q9P2H5 1018 aa22.38■■□□□ 1.17
SCAMP4-205ENST00000452128 CCDC125Q86Z20 511 aa22.37■■□□□ 1.17
SCAMP4-205ENST00000452128 MAP3K19Q56UN5 1328 aa22.36■■□□□ 1.17
SCAMP4-205ENST00000452128 NSD3Q9BZ95 1437 aa22.36■■□□□ 1.17
SCAMP4-205ENST00000452128 ERBB3P21860 1342 aa22.35■■□□□ 1.17
SCAMP4-205ENST00000452128 TOM1L2Q6ZVM7 507 aa22.34■■□□□ 1.17
SCAMP4-205ENST00000452128 PANK3Q9H999 370 aa22.33■■□□□ 1.17
SCAMP4-205ENST00000452128 KIF7Q2M1P5 1343 aa22.32■■□□□ 1.16
SCAMP4-205ENST00000452128 DISP2A7MBM2 1401 aa22.32■■□□□ 1.16
SCAMP4-205ENST00000452128 FAM182BQ5T319 152 aa22.32■■□□□ 1.16
SCAMP4-205ENST00000452128 RGPD5Q99666 1765 aa22.32■■□□□ 1.16
SCAMP4-205ENST00000452128 HOXC9P31274 260 aa22.31■■□□□ 1.16
SCAMP4-205ENST00000452128 BLMP54132 1417 aaPredicted RBP22.31■■□□□ 1.16
SCAMP4-205ENST00000452128 A0A0G2JS52 829 aa22.3■■□□□ 1.16
SCAMP4-205ENST00000452128 MYT1Q01538 1121 aa22.3■■□□□ 1.16
SCAMP4-205ENST00000452128 ANKRD24Q8TF21 1146 aa22.3■■□□□ 1.16
SCAMP4-205ENST00000452128 RRS1Q15050 365 aaKnown RBP22.29■■□□□ 1.16
SCAMP4-205ENST00000452128 CGNL1Q0VF96 1302 aa22.29■■□□□ 1.16
SCAMP4-205ENST00000452128 POLR3GLQ9BT43 218 aa22.28■■□□□ 1.16
SCAMP4-205ENST00000452128 CSB-PGBD3P0DP91 1061 aa22.27■■□□□ 1.16
SCAMP4-205ENST00000452128 CDCA7Q9BWT1 371 aaPredicted RBP22.27■■□□□ 1.16
SCAMP4-205ENST00000452128 LTN1O94822 1766 aa22.27■■□□□ 1.16
SCAMP4-205ENST00000452128 CCDC7Q96M83 1385 aa22.26■■□□□ 1.15
SCAMP4-205ENST00000452128 FAM196AQ6ZSG2 479 aa22.26■■□□□ 1.15
SCAMP4-205ENST00000452128 PARP4Q9UKK3 1724 aaKnown RBP22.25■■□□□ 1.15
SCAMP4-205ENST00000452128 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
SCAMP4-205ENST00000452128 PER1O15534 1290 aaPredicted RBP22.24■■□□□ 1.15
SCAMP4-205ENST00000452128 AMPHP49418 695 aa22.24■■□□□ 1.15
SCAMP4-205ENST00000452128 PDE3BQ13370 1112 aa22.24■■□□□ 1.15
SCAMP4-205ENST00000452128 NLRP2Q9NX02 1062 aa22.24■■□□□ 1.15
SCAMP4-205ENST00000452128 KIF24Q5T7B8 1368 aa22.24■■□□□ 1.15
SCAMP4-205ENST00000452128 WASHC2AQ641Q2 1341 aa22.23■■□□□ 1.15
SCAMP4-205ENST00000452128 DDB1Q16531 1140 aa22.22■■□□□ 1.15
SCAMP4-205ENST00000452128 HSP90AB2PQ58FF8 381 aa22.22■■□□□ 1.15
SCAMP4-205ENST00000452128 DEFB132Q7Z7B7 95 aa22.22■■□□□ 1.15
SCAMP4-205ENST00000452128 MARCH10Q8NA82 808 aaPredicted RBP22.22■■□□□ 1.15
SCAMP4-205ENST00000452128 KIF20BQ96Q89 1820 aa22.22■■□□□ 1.15
SCAMP4-205ENST00000452128 AMER1Q5JTC6 1135 aaPredicted RBP22.21■■□□□ 1.15
SCAMP4-205ENST00000452128 POLKQ9UBT6 870 aa22.21■■□□□ 1.15
SCAMP4-205ENST00000452128 EMILIN1Q9Y6C2 1016 aa22.21■■□□□ 1.15
SCAMP4-205ENST00000452128 INSRP06213 1382 aa22.21■■□□□ 1.15
SCAMP4-205ENST00000452128 BCL9O00512 1426 aa22.21■■□□□ 1.15
SCAMP4-205ENST00000452128 PEAK1Q9H792 1746 aa22.2■■□□□ 1.14
SCAMP4-205ENST00000452128 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
SCAMP4-205ENST00000452128 LTV1Q96GA3 475 aaPredicted RBP22.19■■□□□ 1.14
SCAMP4-205ENST00000452128 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
SCAMP4-205ENST00000452128 LRRC37A3O60309 1634 aa22.18■■□□□ 1.14
SCAMP4-205ENST00000452128 FLT4P35916 1363 aa22.18■■□□□ 1.14
SCAMP4-205ENST00000452128 NSD2O96028 1365 aa22.17■■□□□ 1.14
SCAMP4-205ENST00000452128 EXOC5O00471 708 aa22.17■■□□□ 1.14
SCAMP4-205ENST00000452128 TRIM37O94972 964 aa22.17■■□□□ 1.14
SCAMP4-205ENST00000452128 IL2RBP14784 551 aa22.17■■□□□ 1.14
SCAMP4-205ENST00000452128 WNK3Q9BYP7 1800 aa22.15■■□□□ 1.14
SCAMP4-205ENST00000452128 CAMKK2Q96RR4 588 aa22.14■■□□□ 1.13
SCAMP4-205ENST00000452128 KNSTRNQ9Y448 316 aa22.14■■□□□ 1.13
SCAMP4-205ENST00000452128 TNS2Q63HR2 1409 aa22.14■■□□□ 1.13
SCAMP4-205ENST00000452128 PTF1AQ7RTS3 328 aa22.13■■□□□ 1.13
SCAMP4-205ENST00000452128 FAM208AQ9UK61 1670 aaKnown RBP22.13■■□□□ 1.13
SCAMP4-205ENST00000452128 OVOS2A0A0G2JMS6 1433 aa22.13■■□□□ 1.13
SCAMP4-205ENST00000452128 NCAPD2Q15021 1401 aa22.13■■□□□ 1.13
SCAMP4-205ENST00000452128 SF3B2Q13435 895 aaKnown RBP22.12■■□□□ 1.13
SCAMP4-205ENST00000452128 ANKRD26Q9UPS8 1709 aa22.11■■□□□ 1.13
SCAMP4-205ENST00000452128 BAG6P46379 1132 aa22.11■■□□□ 1.13
SCAMP4-205ENST00000452128 EN1Q05925 392 aaPredicted RBP22.11■■□□□ 1.13
SCAMP4-205ENST00000452128 SMG6Q86US8 1419 aaKnown RBP22.1■■□□□ 1.13
SCAMP4-205ENST00000452128 TNS1Q9HBL0 1735 aaKnown RBP22.09■■□□□ 1.13
SCAMP4-205ENST00000452128 TNNT2P45379 298 aaPredicted RBP22.09■■□□□ 1.13
SCAMP4-205ENST00000452128 NPC1L1Q9UHC9 1359 aa22.09■■□□□ 1.13
SCAMP4-205ENST00000452128 MEGF6O75095 1541 aa22.08■■□□□ 1.13
SCAMP4-205ENST00000452128 MORC1Q86VD1 984 aa22.08■■□□□ 1.13
SCAMP4-205ENST00000452128 BCL11BQ9C0K0 894 aaPredicted RBP22.08■■□□□ 1.13
SCAMP4-205ENST00000452128 RGPD1P0DJD0 1748 aa22.08■■□□□ 1.12
SCAMP4-205ENST00000452128 APBA3O96018 575 aa22.07■■□□□ 1.12
SCAMP4-205ENST00000452128 USHBP1Q8N6Y0 703 aa22.07■■□□□ 1.12
SCAMP4-205ENST00000452128 EYA1Q99502 592 aa22.07■■□□□ 1.12
SCAMP4-205ENST00000452128 MAP2P11137 1827 aaKnown RBP22.07■■□□□ 1.12
SCAMP4-205ENST00000452128 RGPD2P0DJD1 1756 aa22.07■■□□□ 1.12
SCAMP4-205ENST00000452128 PPM1GO15355 546 aaPredicted RBP22.06■■□□□ 1.12
SCAMP4-205ENST00000452128 EIF4A2Q14240 407 aaKnown RBP22.06■■□□□ 1.12
SCAMP4-205ENST00000452128 EZH2Q15910 746 aaKnown RBP22.06■■□□□ 1.12
SCAMP4-205ENST00000452128 PLSCR1O15162 318 aa22.05■■□□□ 1.12
SCAMP4-205ENST00000452128 SRCAPQ6ZRS2 3230 aa22.05■■□□□ 1.12
SCAMP4-205ENST00000452128 KCNQ2O43526 872 aa22.04■■□□□ 1.12
SCAMP4-205ENST00000452128 ZCRB1Q8TBF4 217 aaKnown RBP22.04■■□□□ 1.12
SCAMP4-205ENST00000452128 SBF2Q86WG5 1849 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms