RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 KIFC2Q96AC6 838 aa9.46□□□□□ -0.9
GTF3C3-207ENST00000451088 ITPKCQ96DU7 683 aa9.46□□□□□ -0.9
GTF3C3-207ENST00000451088 SNRKQ9NRH2 765 aa9.45□□□□□ -0.9
GTF3C3-207ENST00000451088 GPR37L1O60883 481 aa9.44□□□□□ -0.9
GTF3C3-207ENST00000451088 SNRPBP14678 240 aaKnown RBP9.44□□□□□ -0.9
GTF3C3-207ENST00000451088 CCDC116Q8IYX3 515 aa9.44□□□□□ -0.9
GTF3C3-207ENST00000451088 KCTD15Q96SI1 283 aaPredicted RBP9.44□□□□□ -0.9
GTF3C3-207ENST00000451088 ZFAND3Q9H8U3 227 aa9.44□□□□□ -0.9
GTF3C3-207ENST00000451088 MRPL14Q6P1L8 145 aaKnown RBP9.43□□□□□ -0.9
GTF3C3-207ENST00000451088 EMILIN1Q9Y6C2 1016 aa9.43□□□□□ -0.9
GTF3C3-207ENST00000451088 ABCC9O60706 1549 aa9.42□□□□□ -0.9
GTF3C3-207ENST00000451088 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
GTF3C3-207ENST00000451088 PPP1R26Q5T8A7 1209 aaPredicted RBP9.41□□□□□ -0.9
GTF3C3-207ENST00000451088 ZFP42Q96MM3 310 aa9.41□□□□□ -0.9
GTF3C3-207ENST00000451088 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
GTF3C3-207ENST00000451088 APBB1O00213 710 aa9.4□□□□□ -0.9
GTF3C3-207ENST00000451088 FBXO45P0C2W1 286 aa9.4□□□□□ -0.9
GTF3C3-207ENST00000451088 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
GTF3C3-207ENST00000451088 INTS6LQ5JSJ4 861 aaKnown RBP9.4□□□□□ -0.9
GTF3C3-207ENST00000451088 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.9
GTF3C3-207ENST00000451088 MEIOBQ8N635 442 aa9.4□□□□□ -0.9
GTF3C3-207ENST00000451088 DHX9Q08211 1270 aaKnown RBP9.39□□□□□ -0.91
GTF3C3-207ENST00000451088 ESPNB1AK53 854 aa9.38□□□□□ -0.91
GTF3C3-207ENST00000451088 SCARF1Q14162 830 aa9.38□□□□□ -0.91
GTF3C3-207ENST00000451088 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
GTF3C3-207ENST00000451088 NR1H3Q13133 447 aa9.37□□□□□ -0.91
GTF3C3-207ENST00000451088 PGPEP1Q9NXJ5 209 aa9.37□□□□□ -0.91
GTF3C3-207ENST00000451088 Q6ZVU0 165 aa9.36□□□□□ -0.91
GTF3C3-207ENST00000451088 LCE2AQ5TA79 106 aaPredicted RBP9.35□□□□□ -0.91
GTF3C3-207ENST00000451088 SEPT12Q8IYM1 358 aa9.35□□□□□ -0.91
GTF3C3-207ENST00000451088 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
GTF3C3-207ENST00000451088 MCCD1P59942 119 aaPredicted RBP9.34□□□□□ -0.91
GTF3C3-207ENST00000451088 TSEN34Q9BSV6 310 aaKnown RBP9.34□□□□□ -0.91
GTF3C3-207ENST00000451088 ERVH48-1M5A8F1 160 aa9.33□□□□□ -0.92
GTF3C3-207ENST00000451088 UPP2O95045 317 aa9.33□□□□□ -0.92
GTF3C3-207ENST00000451088 TREML4Q6UXN2 200 aa9.33□□□□□ -0.92
GTF3C3-207ENST00000451088 TBC1D2BQ9UPU7 963 aa9.33□□□□□ -0.92
GTF3C3-207ENST00000451088 PCDHB9Q9Y5E1 797 aa9.33□□□□□ -0.92
GTF3C3-207ENST00000451088 GIGYF1O75420 1035 aaPredicted RBP9.32□□□□□ -0.92
GTF3C3-207ENST00000451088 NFX1Q12986 1120 aaKnown RBP9.32□□□□□ -0.92
GTF3C3-207ENST00000451088 CBLBQ13191 982 aa9.32□□□□□ -0.92
GTF3C3-207ENST00000451088 C6orf118Q5T5N4 469 aa9.32□□□□□ -0.92
GTF3C3-207ENST00000451088 BMP2P12643 396 aa9.31□□□□□ -0.92
GTF3C3-207ENST00000451088 MCM6Q14566 821 aa9.31□□□□□ -0.92
GTF3C3-207ENST00000451088 ZNF784Q8NCA9 323 aaPredicted RBP9.31□□□□□ -0.92
GTF3C3-207ENST00000451088 ZNF592Q92610 1267 aa9.31□□□□□ -0.92
GTF3C3-207ENST00000451088 PRM3Q9NNZ6 103 aa9.31□□□□□ -0.92
GTF3C3-207ENST00000451088 TMPRSS4Q9NRS4 437 aa9.31□□□□□ -0.92
GTF3C3-207ENST00000451088 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
GTF3C3-207ENST00000451088 LILRA1O75019 489 aa9.3□□□□□ -0.92
GTF3C3-207ENST00000451088 IRF5Q13568 498 aa9.3□□□□□ -0.92
GTF3C3-207ENST00000451088 CCDC125Q86Z20 511 aa9.3□□□□□ -0.92
GTF3C3-207ENST00000451088 SOS2Q07890 1332 aaPredicted RBP9.3□□□□□ -0.92
GTF3C3-207ENST00000451088 TERTO14746 1132 aaKnown RBP9.29□□□□□ -0.92
GTF3C3-207ENST00000451088 RAB15P59190 212 aa9.29□□□□□ -0.92
GTF3C3-207ENST00000451088 SPINT1O43278 529 aa9.28□□□□□ -0.92
GTF3C3-207ENST00000451088 WFS1O76024 890 aa9.28□□□□□ -0.92
GTF3C3-207ENST00000451088 ADD1P35611 737 aaKnown RBP9.28□□□□□ -0.92
GTF3C3-207ENST00000451088 NPAS3Q8IXF0 933 aa9.28□□□□□ -0.92
GTF3C3-207ENST00000451088 NXF1Q9UBU9 619 aaKnown RBP9.28□□□□□ -0.92
GTF3C3-207ENST00000451088 RNF20Q5VTR2 975 aa9.27□□□□□ -0.93
GTF3C3-207ENST00000451088 SOBPA7XYQ1 873 aa9.26□□□□□ -0.93
GTF3C3-207ENST00000451088 ADH1AP07327 375 aa9.26□□□□□ -0.93
GTF3C3-207ENST00000451088 TRIM52Q96A61 297 aa9.26□□□□□ -0.93
GTF3C3-207ENST00000451088 GDPD2Q9HCC8 539 aa9.26□□□□□ -0.93
GTF3C3-207ENST00000451088 MAN1A2O60476 641 aa9.25□□□□□ -0.93
GTF3C3-207ENST00000451088 TMEM132AQ24JP5 1023 aa9.25□□□□□ -0.93
GTF3C3-207ENST00000451088 LCE2CQ5TA81 110 aa9.25□□□□□ -0.93
GTF3C3-207ENST00000451088 KDF1Q8NAX2 398 aaPredicted RBP9.25□□□□□ -0.93
GTF3C3-207ENST00000451088 AGBL1Q96MI9 1066 aa9.25□□□□□ -0.93
GTF3C3-207ENST00000451088 DNMT3LQ9UJW3 386 aa9.25□□□□□ -0.93
GTF3C3-207ENST00000451088 TTLL8A6PVC2 850 aa9.24□□□□□ -0.93
GTF3C3-207ENST00000451088 ERVK-9P63128 1117 aa9.23□□□□□ -0.93
GTF3C3-207ENST00000451088 RELBQ01201 579 aa9.23□□□□□ -0.93
GTF3C3-207ENST00000451088 CYLDQ9NQC7 956 aa9.23□□□□□ -0.93
GTF3C3-207ENST00000451088 CEP126Q9P2H0 1117 aa9.23□□□□□ -0.93
GTF3C3-207ENST00000451088 EIF4G2P78344 907 aaKnown RBP eCLIP9.22□□□□□ -0.93
GTF3C3-207ENST00000451088 COG6Q9Y2V7 657 aa9.22□□□□□ -0.93
GTF3C3-207ENST00000451088 H3BM21 787 aa9.21□□□□□ -0.94
GTF3C3-207ENST00000451088 ABL2P42684 1182 aa9.21□□□□□ -0.94
GTF3C3-207ENST00000451088 PTGIRP43119 386 aa9.21□□□□□ -0.94
GTF3C3-207ENST00000451088 VAC14Q08AM6 782 aa9.21□□□□□ -0.94
GTF3C3-207ENST00000451088 CTSOP43234 321 aaPredicted RBP9.2□□□□□ -0.94
GTF3C3-207ENST00000451088 WASHC4Q2M389 1173 aa9.2□□□□□ -0.94
GTF3C3-207ENST00000451088 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.2□□□□□ -0.946e-8■□□□□ 10
GTF3C3-207ENST00000451088 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
GTF3C3-207ENST00000451088 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
GTF3C3-207ENST00000451088 INSM2Q96T92 566 aaPredicted RBP9.2□□□□□ -0.94
GTF3C3-207ENST00000451088 ZNF395Q9H8N7 513 aaPredicted RBP9.2□□□□□ -0.94
GTF3C3-207ENST00000451088 WIPF1O43516 503 aa9.19□□□□□ -0.94
GTF3C3-207ENST00000451088 VEGFBP49765 207 aa9.19□□□□□ -0.94
GTF3C3-207ENST00000451088 FLIIQ13045 1269 aa9.19□□□□□ -0.94
GTF3C3-207ENST00000451088 PHTF2Q8N3S3 785 aa9.19□□□□□ -0.94
GTF3C3-207ENST00000451088 PCDHB11Q9Y5F2 797 aa9.19□□□□□ -0.94
GTF3C3-207ENST00000451088 ATP5J2-PTCD1G3V325 749 aa9.18□□□□□ -0.94
GTF3C3-207ENST00000451088 SCTRP47872 440 aa9.18□□□□□ -0.94
GTF3C3-207ENST00000451088 CCDC85AQ96PX6 553 aaPredicted RBP9.18□□□□□ -0.94
GTF3C3-207ENST00000451088 TRAK2O60296 914 aa9.17□□□□□ -0.94
GTF3C3-207ENST00000451088 RNF217Q8TC41 542 aa9.17□□□□□ -0.94
GTF3C3-207ENST00000451088 IRF7Q92985 503 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms