RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 ARHGEF25Q86VW2 580 aa14.12□□□□□ -0.15
LINC01238-204ENST00000451070 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
LINC01238-204ENST00000451070 CD163L1Q9NR16 1453 aa14.12□□□□□ -0.15
LINC01238-204ENST00000451070 KTN1Q86UP2 1357 aaKnown RBP14.11□□□□□ -0.15
LINC01238-204ENST00000451070 PARD3Q8TEW0 1356 aa14.11□□□□□ -0.15
LINC01238-204ENST00000451070 WDR17Q8IZU2 1322 aa14.11□□□□□ -0.15
LINC01238-204ENST00000451070 USP54Q70EL1 1684 aa14.1□□□□□ -0.15
LINC01238-204ENST00000451070 KCNA4P22459 653 aa14.1□□□□□ -0.15
LINC01238-204ENST00000451070 TOM1L2Q6ZVM7 507 aa14.1□□□□□ -0.15
LINC01238-204ENST00000451070 KCNH5Q8NCM2 988 aa14.1□□□□□ -0.15
LINC01238-204ENST00000451070 CARD11Q9BXL7 1154 aa14.1□□□□□ -0.15
LINC01238-204ENST00000451070 OVOS2A0A0G2JMS6 1433 aa14.09□□□□□ -0.15
LINC01238-204ENST00000451070 OVOS2A0A0J9YW53 1432 aa14.09□□□□□ -0.15
LINC01238-204ENST00000451070 OVOS2Q6IE36 1432 aa14.09□□□□□ -0.15
LINC01238-204ENST00000451070 SOX12O15370 315 aa14.09□□□□□ -0.15
LINC01238-204ENST00000451070 USP31Q70CQ4 1352 aa14.08□□□□□ -0.16
LINC01238-204ENST00000451070 TONSLQ96HA7 1378 aa14.08□□□□□ -0.16
LINC01238-204ENST00000451070 ABCC6O95255 1503 aa14.07□□□□□ -0.16
LINC01238-204ENST00000451070 DDB1Q16531 1140 aa14.07□□□□□ -0.16
LINC01238-204ENST00000451070 RGPD3A6NKT7 1758 aaPredicted RBP14.06□□□□□ -0.16
LINC01238-204ENST00000451070 RGPD4Q7Z3J3 1758 aa14.06□□□□□ -0.16
LINC01238-204ENST00000451070 C11orf95C9JLR9 678 aaPredicted RBP14.06□□□□□ -0.16
LINC01238-204ENST00000451070 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
LINC01238-204ENST00000451070 CARD10Q9BWT7 1032 aa14.06□□□□□ -0.16
LINC01238-204ENST00000451070 SLC12A5Q9H2X9 1139 aa14.06□□□□□ -0.16
LINC01238-204ENST00000451070 LTN1O94822 1766 aa14.06□□□□□ -0.16
LINC01238-204ENST00000451070 PTF1AQ7RTS3 328 aa14.05□□□□□ -0.16
LINC01238-204ENST00000451070 NME9Q86XW9 330 aa14.05□□□□□ -0.16
LINC01238-204ENST00000451070 PELP1Q8IZL8 1130 aaKnown RBP14.05□□□□□ -0.16
LINC01238-204ENST00000451070 MARCH10Q8NA82 808 aaPredicted RBP14.05□□□□□ -0.16
LINC01238-204ENST00000451070 TMC1Q8TDI8 760 aa14.04□□□□□ -0.16
LINC01238-204ENST00000451070 CDCA7Q9BWT1 371 aaPredicted RBP14.04□□□□□ -0.16
LINC01238-204ENST00000451070 BCL9O00512 1426 aa14.04□□□□□ -0.16
LINC01238-204ENST00000451070 CSB-PGBD3P0DP91 1061 aa14.03□□□□□ -0.16
LINC01238-204ENST00000451070 A0A1W2PP64 1363 aa14.03□□□□□ -0.16
LINC01238-204ENST00000451070 EDC4Q6P2E9 1401 aaKnown RBP14.03□□□□□ -0.16
LINC01238-204ENST00000451070 CCDC7Q96M83 1385 aa14.02□□□□□ -0.17
LINC01238-204ENST00000451070 PLSCR1O15162 318 aa14.02□□□□□ -0.17
LINC01238-204ENST00000451070 PUS7Q96PZ0 661 aaKnown RBP14.02□□□□□ -0.17
LINC01238-204ENST00000451070 TESK2Q96S53 571 aa14.02□□□□□ -0.17
LINC01238-204ENST00000451070 BCL11BQ9C0K0 894 aaPredicted RBP14.02□□□□□ -0.17
LINC01238-204ENST00000451070 ERBB3P21860 1342 aa14.01□□□□□ -0.17
LINC01238-204ENST00000451070 NBPF14Q5TI25 921 aa14.01□□□□□ -0.17
LINC01238-204ENST00000451070 HDGFL2Q7Z4V5 671 aaPredicted RBP14.01□□□□□ -0.17
LINC01238-204ENST00000451070 TNS2Q63HR2 1409 aa14□□□□□ -0.17
LINC01238-204ENST00000451070 ST20-MTHFSA0A0A6YYL1 179 aa14□□□□□ -0.17
LINC01238-204ENST00000451070 TERF2IPQ9NYB0 399 aa14□□□□□ -0.17
LINC01238-204ENST00000451070 EXOC5O00471 708 aa13.99□□□□□ -0.17
LINC01238-204ENST00000451070 PROM2Q8N271 834 aa13.99□□□□□ -0.17
LINC01238-204ENST00000451070 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
LINC01238-204ENST00000451070 CASZ1Q86V15 1759 aa13.98□□□□□ -0.17
LINC01238-204ENST00000451070 NHSQ6T4R5 1651 aa13.98□□□□□ -0.17
LINC01238-204ENST00000451070 NLRP2Q9NX02 1062 aa13.97□□□□□ -0.17
LINC01238-204ENST00000451070 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.17
LINC01238-204ENST00000451070 KCNQ2O43526 872 aa13.96□□□□□ -0.17
LINC01238-204ENST00000451070 TRIM26Q12899 539 aaPredicted RBP13.96□□□□□ -0.17
LINC01238-204ENST00000451070 ANKRD24Q8TF21 1146 aa13.96□□□□□ -0.17
LINC01238-204ENST00000451070 IL2RBP14784 551 aa13.95□□□□□ -0.18
LINC01238-204ENST00000451070 FAM208AQ9UK61 1670 aaKnown RBP13.95□□□□□ -0.18
LINC01238-204ENST00000451070 KAT6BQ8WYB5 2073 aa13.94□□□□□ -0.18
LINC01238-204ENST00000451070 TXNRD1Q16881 649 aa13.94□□□□□ -0.18
LINC01238-204ENST00000451070 IP6K1Q92551 441 aa13.94□□□□□ -0.18
LINC01238-204ENST00000451070 SPON1Q9HCB6 807 aa13.94□□□□□ -0.18
LINC01238-204ENST00000451070 BTAF1O14981 1849 aa13.93□□□□□ -0.18
LINC01238-204ENST00000451070 PDGFDQ9GZP0 370 aaPredicted RBP13.93□□□□□ -0.18
LINC01238-204ENST00000451070 RGPD2P0DJD1 1756 aa13.93□□□□□ -0.18
LINC01238-204ENST00000451070 ANKRD36BQ8N2N9 1353 aa13.93□□□□□ -0.18
LINC01238-204ENST00000451070 FBLN1P23142 703 aa13.92□□□□□ -0.18
LINC01238-204ENST00000451070 ACSBG1Q96GR2 724 aa13.92□□□□□ -0.18
LINC01238-204ENST00000451070 USP47Q96K76 1375 aa13.92□□□□□ -0.18
LINC01238-204ENST00000451070 MAP3K19Q56UN5 1328 aa13.91□□□□□ -0.18
LINC01238-204ENST00000451070 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
LINC01238-204ENST00000451070 COG3Q96JB2 828 aa13.91□□□□□ -0.18
LINC01238-204ENST00000451070 PAPPAQ13219 1627 aa13.9□□□□□ -0.18
LINC01238-204ENST00000451070 HOXC9P31274 260 aa13.9□□□□□ -0.18
LINC01238-204ENST00000451070 LTV1Q96GA3 475 aaPredicted RBP13.9□□□□□ -0.18
LINC01238-204ENST00000451070 SHANK3Q9BYB0 1731 aa13.9□□□□□ -0.18
LINC01238-204ENST00000451070 SLC15A2Q16348 729 aa13.89□□□□□ -0.19
LINC01238-204ENST00000451070 FYB1O15117 783 aa13.88□□□□□ -0.19
LINC01238-204ENST00000451070 TMF1P82094 1093 aa13.88□□□□□ -0.19
LINC01238-204ENST00000451070 STK32BQ9NY57 414 aa13.88□□□□□ -0.19
LINC01238-204ENST00000451070 PPP1R1BQ9UD71 204 aaPredicted RBP13.88□□□□□ -0.19
LINC01238-204ENST00000451070 KIF20BQ96Q89 1820 aa13.87□□□□□ -0.19
LINC01238-204ENST00000451070 ZBTB7AO95365 584 aa13.87□□□□□ -0.19
LINC01238-204ENST00000451070 AMPHP49418 695 aa13.87□□□□□ -0.19
LINC01238-204ENST00000451070 GGNBP2Q9H3C7 697 aa13.87□□□□□ -0.19
LINC01238-204ENST00000451070 MYOM1P52179 1685 aa13.87□□□□□ -0.19
LINC01238-204ENST00000451070 RTL1A6NKG5 1358 aa13.86□□□□□ -0.19
LINC01238-204ENST00000451070 MEGF6O75095 1541 aa13.86□□□□□ -0.19
LINC01238-204ENST00000451070 PTGER2P43116 358 aa13.86□□□□□ -0.19
LINC01238-204ENST00000451070 RRS1Q15050 365 aaKnown RBP13.86□□□□□ -0.19
LINC01238-204ENST00000451070 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
LINC01238-204ENST00000451070 DDX54Q8TDD1 881 aaKnown RBP13.86□□□□□ -0.19
LINC01238-204ENST00000451070 DOT1LQ8TEK3 1739 aa13.86□□□□□ -0.19
LINC01238-204ENST00000451070 LRRC4BQ9NT99 713 aa13.85□□□□□ -0.19
LINC01238-204ENST00000451070 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
LINC01238-204ENST00000451070 ZNF827Q17R98 1081 aa13.84□□□□□ -0.19
LINC01238-204ENST00000451070 NBPF6Q5VWK0 638 aa13.84□□□□□ -0.19
LINC01238-204ENST00000451070 NBPF4Q96M43 638 aa13.84□□□□□ -0.19
LINC01238-204ENST00000451070 SGIP1Q9BQI5 828 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms