RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 SOX12O15370 315 aa24.88■■□□□ 1.57
FAM3A-216ENST00000449971 EVC2Q86UK5 1308 aa24.87■■□□□ 1.57
FAM3A-216ENST00000449971 CABP1Q9NZU7 370 aa24.87■■□□□ 1.57
FAM3A-216ENST00000449971 PLSCR1O15162 318 aa24.86■■□□□ 1.57
FAM3A-216ENST00000449971 ATF5Q9Y2D1 282 aaPredicted RBP24.85■■□□□ 1.57
FAM3A-216ENST00000449971 AATKQ6ZMQ8 1374 aa24.84■■□□□ 1.57
FAM3A-216ENST00000449971 LRRC37A3O60309 1634 aa24.84■■□□□ 1.57
FAM3A-216ENST00000449971 QRICH2Q9H0J4 1663 aa24.84■■□□□ 1.57
FAM3A-216ENST00000449971 CSB-PGBD3P0DP91 1061 aa24.83■■□□□ 1.57
FAM3A-216ENST00000449971 MARCH10Q8NA82 808 aaPredicted RBP24.83■■□□□ 1.57
FAM3A-216ENST00000449971 PEAK1Q9H792 1746 aa24.83■■□□□ 1.57
FAM3A-216ENST00000449971 USP6P35125 1406 aa24.82■■□□□ 1.56
FAM3A-216ENST00000449971 AXIN2Q9Y2T1 843 aa24.82■■□□□ 1.56
FAM3A-216ENST00000449971 PROM2Q8N271 834 aa24.81■■□□□ 1.56
FAM3A-216ENST00000449971 SBF2Q86WG5 1849 aa24.81■■□□□ 1.56
FAM3A-216ENST00000449971 STK32BQ9NY57 414 aa24.79■■□□□ 1.56
FAM3A-216ENST00000449971 WDR17Q8IZU2 1322 aa24.79■■□□□ 1.56
FAM3A-216ENST00000449971 UTRNP46939 3433 aa24.77■■□□□ 1.56
FAM3A-216ENST00000449971 BRD4O60885 1362 aaPredicted RBP24.77■■□□□ 1.56
FAM3A-216ENST00000449971 CASZ1Q86V15 1759 aa24.77■■□□□ 1.56
FAM3A-216ENST00000449971 SLIT3O75094 1523 aa24.76■■□□□ 1.55
FAM3A-216ENST00000449971 TXNRD1Q16881 649 aa24.76■■□□□ 1.55
FAM3A-216ENST00000449971 RGPD3A6NKT7 1758 aaPredicted RBP24.75■■□□□ 1.55
FAM3A-216ENST00000449971 RGPD4Q7Z3J3 1758 aa24.75■■□□□ 1.55
FAM3A-216ENST00000449971 PTGER2P43116 358 aa24.75■■□□□ 1.55
FAM3A-216ENST00000449971 MYOM1P52179 1685 aa24.75■■□□□ 1.55
FAM3A-216ENST00000449971 CDCA7Q9BWT1 371 aaPredicted RBP24.74■■□□□ 1.55
FAM3A-216ENST00000449971 FHDC1Q9C0D6 1143 aaPredicted RBP24.74■■□□□ 1.55
FAM3A-216ENST00000449971 CPSF1Q10570 1443 aaKnown RBP24.74■■□□□ 1.55
FAM3A-216ENST00000449971 EXOC5O00471 708 aa24.73■■□□□ 1.55
FAM3A-216ENST00000449971 ZNF784Q8NCA9 323 aaPredicted RBP24.73■■□□□ 1.55
FAM3A-216ENST00000449971 PIK3C2AO00443 1686 aa24.72■■□□□ 1.55
FAM3A-216ENST00000449971 SLC15A2Q16348 729 aa24.72■■□□□ 1.55
FAM3A-216ENST00000449971 ARHGEF25Q86VW2 580 aa24.72■■□□□ 1.55
FAM3A-216ENST00000449971 CARD10Q9BWT7 1032 aa24.72■■□□□ 1.55
FAM3A-216ENST00000449971 COL18A1P39060 1754 aa24.72■■□□□ 1.55
FAM3A-216ENST00000449971 AKAP12Q02952 1782 aa24.72■■□□□ 1.55
FAM3A-216ENST00000449971 CLSPNQ9HAW4 1339 aa24.71■■□□□ 1.55
FAM3A-216ENST00000449971 ACSBG1Q96GR2 724 aa24.71■■□□□ 1.55
FAM3A-216ENST00000449971 WNK3Q9BYP7 1800 aa24.7■■□□□ 1.55
FAM3A-216ENST00000449971 SBNO2Q9Y2G9 1366 aa24.7■■□□□ 1.55
FAM3A-216ENST00000449971 TTC21BQ7Z4L5 1316 aa24.7■■□□□ 1.54
FAM3A-216ENST00000449971 KCNH5Q8NCM2 988 aa24.7■■□□□ 1.54
FAM3A-216ENST00000449971 ZNF692Q9BU19 519 aaPredicted RBP24.7■■□□□ 1.54
FAM3A-216ENST00000449971 SYT17Q9BSW7 474 aa24.69■■□□□ 1.54
FAM3A-216ENST00000449971 TIMELESSQ9UNS1 1208 aa24.69■■□□□ 1.54
FAM3A-216ENST00000449971 RGPD5Q99666 1765 aa24.69■■□□□ 1.54
FAM3A-216ENST00000449971 ST20-MTHFSA0A0A6YYL1 179 aa24.68■■□□□ 1.54
FAM3A-216ENST00000449971 CCER1Q8TC90 406 aaPredicted RBP24.68■■□□□ 1.54
FAM3A-216ENST00000449971 TMC1Q8TDI8 760 aa24.66■■□□□ 1.54
FAM3A-216ENST00000449971 MTFR1LQ9H019 292 aa24.66■■□□□ 1.54
FAM3A-216ENST00000449971 BCL9O00512 1426 aa24.66■■□□□ 1.54
FAM3A-216ENST00000449971 SENP3-EIF4A1A0A087X0R7 540 aa24.63■■□□□ 1.53
FAM3A-216ENST00000449971 KLHL34Q8N239 644 aa24.63■■□□□ 1.53
FAM3A-216ENST00000449971 NLRP2Q9NX02 1062 aa24.63■■□□□ 1.53
FAM3A-216ENST00000449971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.62■■□□□ 1.53
FAM3A-216ENST00000449971 ARXQ96QS3 562 aa24.62■■□□□ 1.53
FAM3A-216ENST00000449971 TESK2Q96S53 571 aa24.62■■□□□ 1.53
FAM3A-216ENST00000449971 CCDC7Q96M83 1385 aa24.62■■□□□ 1.53
FAM3A-216ENST00000449971 KAT6BQ8WYB5 2073 aa24.62■■□□□ 1.53
FAM3A-216ENST00000449971 TNS2Q63HR2 1409 aa24.61■■□□□ 1.53
FAM3A-216ENST00000449971 SLC12A5Q9H2X9 1139 aa24.61■■□□□ 1.53
FAM3A-216ENST00000449971 KTN1Q86UP2 1357 aaKnown RBP24.61■■□□□ 1.53
FAM3A-216ENST00000449971 TTC21AQ8NDW8 1320 aa24.61■■□□□ 1.53
FAM3A-216ENST00000449971 SLC24A1O60721 1099 aa24.6■■□□□ 1.53
FAM3A-216ENST00000449971 PUS7Q96PZ0 661 aaKnown RBP24.59■■□□□ 1.53
FAM3A-216ENST00000449971 HDGFL2Q7Z4V5 671 aaPredicted RBP24.58■■□□□ 1.53
FAM3A-216ENST00000449971 SGIP1Q9BQI5 828 aa24.58■■□□□ 1.53
FAM3A-216ENST00000449971 USP47Q96K76 1375 aa24.57■■□□□ 1.52
FAM3A-216ENST00000449971 NFAT5O94916 1531 aa24.57■■□□□ 1.52
FAM3A-216ENST00000449971 GPR162Q16538 588 aa24.57■■□□□ 1.52
FAM3A-216ENST00000449971 PELP1Q8IZL8 1130 aaKnown RBP24.57■■□□□ 1.52
FAM3A-216ENST00000449971 ZNF827Q17R98 1081 aa24.56■■□□□ 1.52
FAM3A-216ENST00000449971 IL2RBP14784 551 aa24.55■■□□□ 1.52
FAM3A-216ENST00000449971 TERF2IPQ9NYB0 399 aa24.55■■□□□ 1.52
FAM3A-216ENST00000449971 NHSQ6T4R5 1651 aa24.54■■□□□ 1.52
FAM3A-216ENST00000449971 C1QTNF8P60827 252 aa24.53■■□□□ 1.52
FAM3A-216ENST00000449971 TMF1P82094 1093 aa24.53■■□□□ 1.52
FAM3A-216ENST00000449971 NME9Q86XW9 330 aa24.53■■□□□ 1.52
FAM3A-216ENST00000449971 ERBB3P21860 1342 aa24.53■■□□□ 1.52
FAM3A-216ENST00000449971 ANKRD24Q8TF21 1146 aa24.52■■□□□ 1.52
FAM3A-216ENST00000449971 LRRC4BQ9NT99 713 aa24.52■■□□□ 1.52
FAM3A-216ENST00000449971 CHD4Q14839 1912 aa24.52■■□□□ 1.52
FAM3A-216ENST00000449971 GOLGB1Q14789 3259 aaKnown RBP24.5■■□□□ 1.51
FAM3A-216ENST00000449971 CD163L1Q9NR16 1453 aa24.5■■□□□ 1.51
FAM3A-216ENST00000449971 ABCC6O95255 1503 aa24.5■■□□□ 1.51
FAM3A-216ENST00000449971 BTAF1O14981 1849 aa24.49■■□□□ 1.51
FAM3A-216ENST00000449971 DDX54Q8TDD1 881 aaKnown RBP24.49■■□□□ 1.51
FAM3A-216ENST00000449971 KCNQ4P56696 695 aa24.48■■□□□ 1.51
FAM3A-216ENST00000449971 LTV1Q96GA3 475 aaPredicted RBP24.48■■□□□ 1.51
FAM3A-216ENST00000449971 SYTL4Q96C24 671 aaPredicted RBP24.47■■□□□ 1.51
FAM3A-216ENST00000449971 PAPPAQ13219 1627 aa24.46■■□□□ 1.51
FAM3A-216ENST00000449971 A0A1W2PP64 1363 aa24.46■■□□□ 1.51
FAM3A-216ENST00000449971 POLD1P28340 1107 aa24.46■■□□□ 1.51
FAM3A-216ENST00000449971 CDCA8Q53HL2 280 aa24.45■■□□□ 1.5
FAM3A-216ENST00000449971 EDC4Q6P2E9 1401 aaKnown RBP24.44■■□□□ 1.5
FAM3A-216ENST00000449971 TFCP2L1Q9NZI6 479 aa24.44■■□□□ 1.5
FAM3A-216ENST00000449971 USP31Q70CQ4 1352 aa24.43■■□□□ 1.5
FAM3A-216ENST00000449971 MAP3K5Q99683 1374 aa24.43■■□□□ 1.5
FAM3A-216ENST00000449971 GIGYF1O75420 1035 aaPredicted RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms