RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 GLI3P10071 1580 aa17.08■□□□□ 0.32
HLA-DRB9-201ENST00000449413 SLIT2O94813 1529 aa17.08■□□□□ 0.32
HLA-DRB9-201ENST00000449413 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
HLA-DRB9-201ENST00000449413 XPCQ01831 940 aaPredicted RBP17.07■□□□□ 0.32
HLA-DRB9-201ENST00000449413 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
HLA-DRB9-201ENST00000449413 PNISRQ8TF01 805 aaKnown RBP17.06■□□□□ 0.32
HLA-DRB9-201ENST00000449413 INSRP06213 1382 aa17.05■□□□□ 0.32
HLA-DRB9-201ENST00000449413 RGPD1P0DJD0 1748 aa17.05■□□□□ 0.32
HLA-DRB9-201ENST00000449413 MTHFSP49914 203 aa17.05■□□□□ 0.32
HLA-DRB9-201ENST00000449413 SEPT12Q8IYM1 358 aa17.05■□□□□ 0.32
HLA-DRB9-201ENST00000449413 FAM9BQ8IZU0 186 aa17.05■□□□□ 0.32
HLA-DRB9-201ENST00000449413 ABTB2Q8N961 1025 aa17.05■□□□□ 0.32
HLA-DRB9-201ENST00000449413 USP19O94966 1318 aa17.04■□□□□ 0.32
HLA-DRB9-201ENST00000449413 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
HLA-DRB9-201ENST00000449413 ARHGEF10O15013 1369 aa17.03■□□□□ 0.32
HLA-DRB9-201ENST00000449413 PSDA5PKW4 1024 aaPredicted RBP17.03■□□□□ 0.32
HLA-DRB9-201ENST00000449413 ONECUT3O60422 494 aaPredicted RBP17.03■□□□□ 0.32
HLA-DRB9-201ENST00000449413 BAG6P46379 1132 aa17.03■□□□□ 0.32
HLA-DRB9-201ENST00000449413 NLRP6P59044 892 aa17.03■□□□□ 0.32
HLA-DRB9-201ENST00000449413 VPS72Q15906 364 aa17.02■□□□□ 0.32
HLA-DRB9-201ENST00000449413 NUTM2GQ5VZR2 741 aa17.02■□□□□ 0.32
HLA-DRB9-201ENST00000449413 KRT27Q7Z3Y8 459 aa17.02■□□□□ 0.32
HLA-DRB9-201ENST00000449413 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.32
HLA-DRB9-201ENST00000449413 RTL1A6NKG5 1358 aa17.02■□□□□ 0.31
HLA-DRB9-201ENST00000449413 ABCC6O95255 1503 aa17.01■□□□□ 0.31
HLA-DRB9-201ENST00000449413 WDR43Q15061 677 aaKnown RBP eCLIP17.01■□□□□ 0.31
HLA-DRB9-201ENST00000449413 POLKQ9UBT6 870 aa17.01■□□□□ 0.31
HLA-DRB9-201ENST00000449413 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
HLA-DRB9-201ENST00000449413 SPATA31A3Q5VYP0 1347 aa17■□□□□ 0.31
HLA-DRB9-201ENST00000449413 RRS1Q15050 365 aaKnown RBP17■□□□□ 0.31
HLA-DRB9-201ENST00000449413 FLT4P35916 1363 aa17■□□□□ 0.31
HLA-DRB9-201ENST00000449413 FBLN1P23142 703 aa16.99■□□□□ 0.31
HLA-DRB9-201ENST00000449413 FAM208AQ9UK61 1670 aaKnown RBP16.99■□□□□ 0.31
HLA-DRB9-201ENST00000449413 CAMTA1Q9Y6Y1 1673 aa16.98■□□□□ 0.31
HLA-DRB9-201ENST00000449413 RGPD5Q99666 1765 aa16.98■□□□□ 0.31
HLA-DRB9-201ENST00000449413 SOX12O15370 315 aa16.98■□□□□ 0.31
HLA-DRB9-201ENST00000449413 BRWD3Q6RI45 1802 aa16.98■□□□□ 0.31
HLA-DRB9-201ENST00000449413 MAP3K19Q56UN5 1328 aa16.97■□□□□ 0.31
HLA-DRB9-201ENST00000449413 COL18A1P39060 1754 aa16.97■□□□□ 0.31
HLA-DRB9-201ENST00000449413 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
HLA-DRB9-201ENST00000449413 PPM1GO15355 546 aaPredicted RBP16.96■□□□□ 0.31
HLA-DRB9-201ENST00000449413 KCNH5Q8NCM2 988 aa16.96■□□□□ 0.31
HLA-DRB9-201ENST00000449413 HNRNPUQ00839 825 aaKnown RBP eCLIP16.95■□□□□ 0.3
HLA-DRB9-201ENST00000449413 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
HLA-DRB9-201ENST00000449413 LMO7Q8WWI1 1683 aa16.94■□□□□ 0.3
HLA-DRB9-201ENST00000449413 DIAPH1O60610 1272 aaKnown RBP16.94■□□□□ 0.3
HLA-DRB9-201ENST00000449413 CCDC9Q9Y3X0 531 aaKnown RBP16.94■□□□□ 0.3
HLA-DRB9-201ENST00000449413 YY1P25490 414 aa16.93■□□□□ 0.3
HLA-DRB9-201ENST00000449413 ADAMTS8Q9UP79 889 aa16.93■□□□□ 0.3
HLA-DRB9-201ENST00000449413 HAP1P54257 671 aaPredicted RBP16.92■□□□□ 0.3
HLA-DRB9-201ENST00000449413 EN1Q05925 392 aaPredicted RBP16.92■□□□□ 0.3
HLA-DRB9-201ENST00000449413 R3HDM1Q15032 1099 aaKnown RBP16.92■□□□□ 0.3
HLA-DRB9-201ENST00000449413 NUDCQ9Y266 331 aa16.92■□□□□ 0.3
HLA-DRB9-201ENST00000449413 DISP2A7MBM2 1401 aa16.91■□□□□ 0.3
HLA-DRB9-201ENST00000449413 GCP02774 474 aa16.91■□□□□ 0.3
HLA-DRB9-201ENST00000449413 ZBED9Q6R2W3 1325 aa16.91■□□□□ 0.3
HLA-DRB9-201ENST00000449413 HOXC9P31274 260 aa16.9■□□□□ 0.3
HLA-DRB9-201ENST00000449413 AMPHP49418 695 aa16.9■□□□□ 0.3
HLA-DRB9-201ENST00000449413 CPDO75976 1380 aa16.89■□□□□ 0.3
HLA-DRB9-201ENST00000449413 PLCH1Q4KWH8 1693 aa16.89■□□□□ 0.29
HLA-DRB9-201ENST00000449413 A0A0G2JS52 829 aa16.89■□□□□ 0.29
HLA-DRB9-201ENST00000449413 U2SURPO15042 1029 aaKnown RBP16.89■□□□□ 0.29
HLA-DRB9-201ENST00000449413 IL13P35225 146 aa16.89■□□□□ 0.29
HLA-DRB9-201ENST00000449413 MYT1Q01538 1121 aa16.89■□□□□ 0.29
HLA-DRB9-201ENST00000449413 NWD2Q9ULI1 1742 aa16.89■□□□□ 0.29
HLA-DRB9-201ENST00000449413 COL14A1Q05707 1796 aaKnown RBP16.89■□□□□ 0.29
HLA-DRB9-201ENST00000449413 PLEKHG5O94827 1062 aa16.88■□□□□ 0.29
HLA-DRB9-201ENST00000449413 CENPBP07199 599 aaPredicted RBP16.88■□□□□ 0.29
HLA-DRB9-201ENST00000449413 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
HLA-DRB9-201ENST00000449413 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.29
HLA-DRB9-201ENST00000449413 EIF4A2Q14240 407 aaKnown RBP16.88■□□□□ 0.29
HLA-DRB9-201ENST00000449413 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
HLA-DRB9-201ENST00000449413 DLG5Q8TDM6 1919 aa16.88■□□□□ 0.29
HLA-DRB9-201ENST00000449413 FAM98CQ17RN3 349 aaKnown RBP16.87■□□□□ 0.29
HLA-DRB9-201ENST00000449413 ARHGEF25Q86VW2 580 aa16.87■□□□□ 0.29
HLA-DRB9-201ENST00000449413 CABLES1Q8TDN4 633 aa16.87■□□□□ 0.29
HLA-DRB9-201ENST00000449413 CCDC146Q8IYE0 955 aa16.86■□□□□ 0.29
HLA-DRB9-201ENST00000449413 ZBTB7CA1YPR0 619 aa16.85■□□□□ 0.29
HLA-DRB9-201ENST00000449413 IP6K1Q92551 441 aa16.85■□□□□ 0.29
HLA-DRB9-201ENST00000449413 KIAA0232Q92628 1395 aa16.85■□□□□ 0.29
HLA-DRB9-201ENST00000449413 FAM83GA6ND36 823 aa16.84■□□□□ 0.29
HLA-DRB9-201ENST00000449413 RUNDC1Q96C34 613 aa16.84■□□□□ 0.29
HLA-DRB9-201ENST00000449413 IGSF1Q8N6C5 1336 aa16.84■□□□□ 0.29
HLA-DRB9-201ENST00000449413 KDRP35968 1356 aa16.84■□□□□ 0.29
HLA-DRB9-201ENST00000449413 NCAPD2Q15021 1401 aa16.84■□□□□ 0.29
HLA-DRB9-201ENST00000449413 NRAPQ86VF7 1730 aa16.84■□□□□ 0.29
HLA-DRB9-201ENST00000449413 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
HLA-DRB9-201ENST00000449413 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
HLA-DRB9-201ENST00000449413 ZC3H6P61129 1189 aaKnown RBP16.82■□□□□ 0.28
HLA-DRB9-201ENST00000449413 EZH2Q15910 746 aaKnown RBP16.82■□□□□ 0.28
HLA-DRB9-201ENST00000449413 PARP4Q9UKK3 1724 aaKnown RBP16.82■□□□□ 0.28
HLA-DRB9-201ENST00000449413 MAPK8IP3Q9UPT6 1336 aa16.81■□□□□ 0.28
HLA-DRB9-201ENST00000449413 CAMKK2Q96RR4 588 aa16.81■□□□□ 0.28
HLA-DRB9-201ENST00000449413 COL5A2P05997 1499 aaPredicted RBP16.8■□□□□ 0.28
HLA-DRB9-201ENST00000449413 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
HLA-DRB9-201ENST00000449413 FCHSD2O94868 740 aa16.8■□□□□ 0.28
HLA-DRB9-201ENST00000449413 HMOX1P09601 288 aa16.8■□□□□ 0.28
HLA-DRB9-201ENST00000449413 FAM182BQ5T319 152 aa16.8■□□□□ 0.28
HLA-DRB9-201ENST00000449413 PLEKHF1Q96S99 279 aa16.8■□□□□ 0.28
HLA-DRB9-201ENST00000449413 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms