RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
RFX3-207ENST00000449190 EVX2Q03828 476 aa12.63□□□□□ -0.39
RFX3-207ENST00000449190 USP31Q70CQ4 1352 aa12.62□□□□□ -0.39
RFX3-207ENST00000449190 CCDC7Q96M83 1385 aa12.62□□□□□ -0.39
RFX3-207ENST00000449190 ARHGEF25Q86VW2 580 aa12.62□□□□□ -0.39
RFX3-207ENST00000449190 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
RFX3-207ENST00000449190 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.62□□□□□ -0.39
RFX3-207ENST00000449190 COL14A1Q05707 1796 aaKnown RBP12.61□□□□□ -0.39
RFX3-207ENST00000449190 ABCA3Q99758 1704 aa12.61□□□□□ -0.39
RFX3-207ENST00000449190 NWD2Q9ULI1 1742 aa12.61□□□□□ -0.39
RFX3-207ENST00000449190 SPATA31A1Q5TZJ5 1347 aa12.61□□□□□ -0.39
RFX3-207ENST00000449190 WASHC2AQ641Q2 1341 aa12.61□□□□□ -0.39
RFX3-207ENST00000449190 CD163L1Q9NR16 1453 aa12.6□□□□□ -0.39
RFX3-207ENST00000449190 AATKQ6ZMQ8 1374 aa12.6□□□□□ -0.39
RFX3-207ENST00000449190 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
RFX3-207ENST00000449190 NME9Q86XW9 330 aa12.6□□□□□ -0.39
RFX3-207ENST00000449190 CCDC125Q86Z20 511 aa12.6□□□□□ -0.39
RFX3-207ENST00000449190 ZRANB1Q9UGI0 708 aa12.6□□□□□ -0.39
RFX3-207ENST00000449190 EDC4Q6P2E9 1401 aaKnown RBP12.6□□□□□ -0.39
RFX3-207ENST00000449190 CRYBG1Q9Y4K1 1723 aa12.59□□□□□ -0.39
RFX3-207ENST00000449190 ZBTB7CA1YPR0 619 aa12.59□□□□□ -0.39
RFX3-207ENST00000449190 BARGINQ6ZT62 677 aa12.59□□□□□ -0.39
RFX3-207ENST00000449190 KRT27Q7Z3Y8 459 aa12.59□□□□□ -0.39
RFX3-207ENST00000449190 PANK3Q9H999 370 aa12.59□□□□□ -0.39
RFX3-207ENST00000449190 GLI3P10071 1580 aa12.59□□□□□ -0.39
RFX3-207ENST00000449190 A0A1W2PP64 1363 aa12.58□□□□□ -0.4
RFX3-207ENST00000449190 ANKRD36BQ8N2N9 1353 aa12.58□□□□□ -0.4
RFX3-207ENST00000449190 LARP1Q6PKG0 1096 aaKnown RBP12.58□□□□□ -0.4
RFX3-207ENST00000449190 THRAP3Q9Y2W1 955 aaKnown RBP12.58□□□□□ -0.4
RFX3-207ENST00000449190 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
RFX3-207ENST00000449190 SLIT3O75094 1523 aa12.57□□□□□ -0.4
RFX3-207ENST00000449190 A0A0G2JS52 829 aa12.57□□□□□ -0.4
RFX3-207ENST00000449190 SOX12O15370 315 aa12.57□□□□□ -0.4
RFX3-207ENST00000449190 MYT1Q01538 1121 aa12.57□□□□□ -0.4
RFX3-207ENST00000449190 TCP11L2Q8N4U5 519 aa12.57□□□□□ -0.4
RFX3-207ENST00000449190 AXIN2Q9Y2T1 843 aa12.57□□□□□ -0.4
RFX3-207ENST00000449190 KNSTRNQ9Y448 316 aa12.57□□□□□ -0.4
RFX3-207ENST00000449190 CAMTA1Q9Y6Y1 1673 aa12.57□□□□□ -0.4
RFX3-207ENST00000449190 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
RFX3-207ENST00000449190 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
RFX3-207ENST00000449190 USP35Q9P2H5 1018 aa12.56□□□□□ -0.4
RFX3-207ENST00000449190 NRKQ7Z2Y5 1582 aa12.56□□□□□ -0.4
RFX3-207ENST00000449190 FYB1O15117 783 aa12.55□□□□□ -0.4
RFX3-207ENST00000449190 COG3Q96JB2 828 aa12.55□□□□□ -0.4
RFX3-207ENST00000449190 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
RFX3-207ENST00000449190 TOM1L2Q6ZVM7 507 aa12.54□□□□□ -0.4
RFX3-207ENST00000449190 CARD14Q9BXL6 1004 aa12.54□□□□□ -0.4
RFX3-207ENST00000449190 CGNL1Q0VF96 1302 aa12.54□□□□□ -0.4
RFX3-207ENST00000449190 PIK3C2AO00443 1686 aa12.54□□□□□ -0.4
RFX3-207ENST00000449190 NRAPQ86VF7 1730 aa12.54□□□□□ -0.4
RFX3-207ENST00000449190 WDR17Q8IZU2 1322 aa12.53□□□□□ -0.4
RFX3-207ENST00000449190 MON2Q7Z3U7 1717 aa12.52□□□□□ -0.41
RFX3-207ENST00000449190 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.41
RFX3-207ENST00000449190 PDE3BQ13370 1112 aa12.52□□□□□ -0.41
RFX3-207ENST00000449190 CARD10Q9BWT7 1032 aa12.52□□□□□ -0.41
RFX3-207ENST00000449190 CRB1P82279 1406 aa12.52□□□□□ -0.41
RFX3-207ENST00000449190 NSD3Q9BZ95 1437 aa12.52□□□□□ -0.41
RFX3-207ENST00000449190 COL5A2P05997 1499 aaPredicted RBP12.52□□□□□ -0.41
RFX3-207ENST00000449190 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
RFX3-207ENST00000449190 SF3B2Q13435 895 aaKnown RBP12.51□□□□□ -0.41
RFX3-207ENST00000449190 FAM196AQ6ZSG2 479 aa12.51□□□□□ -0.41
RFX3-207ENST00000449190 IP6K1Q92551 441 aa12.51□□□□□ -0.41
RFX3-207ENST00000449190 CDCA7Q9BWT1 371 aaPredicted RBP12.51□□□□□ -0.41
RFX3-207ENST00000449190 GGNBP2Q9H3C7 697 aa12.51□□□□□ -0.41
RFX3-207ENST00000449190 OVOS2A0A0J9YW53 1432 aa12.5□□□□□ -0.41
RFX3-207ENST00000449190 OVOS2Q6IE36 1432 aa12.5□□□□□ -0.41
RFX3-207ENST00000449190 NFAT5O94916 1531 aa12.49□□□□□ -0.41
RFX3-207ENST00000449190 BLMP54132 1417 aaPredicted RBP12.49□□□□□ -0.41
RFX3-207ENST00000449190 COL18A1P39060 1754 aa12.48□□□□□ -0.41
RFX3-207ENST00000449190 FBLN1P23142 703 aa12.48□□□□□ -0.41
RFX3-207ENST00000449190 AMPHP49418 695 aa12.48□□□□□ -0.41
RFX3-207ENST00000449190 CNGB1Q14028 1251 aaPredicted RBP12.48□□□□□ -0.41
RFX3-207ENST00000449190 FAM182BQ5T319 152 aa12.48□□□□□ -0.41
RFX3-207ENST00000449190 MORC1Q86VD1 984 aa12.48□□□□□ -0.41
RFX3-207ENST00000449190 ANKRD24Q8TF21 1146 aa12.48□□□□□ -0.41
RFX3-207ENST00000449190 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
RFX3-207ENST00000449190 ERBB3P21860 1342 aa12.47□□□□□ -0.41
RFX3-207ENST00000449190 MAP3K19Q56UN5 1328 aa12.47□□□□□ -0.41
RFX3-207ENST00000449190 EXOC5O00471 708 aa12.47□□□□□ -0.41
RFX3-207ENST00000449190 PER1O15534 1290 aaPredicted RBP12.47□□□□□ -0.41
RFX3-207ENST00000449190 DDB1Q16531 1140 aa12.47□□□□□ -0.41
RFX3-207ENST00000449190 NLRP2Q9NX02 1062 aa12.47□□□□□ -0.41
RFX3-207ENST00000449190 USP54Q70EL1 1684 aa12.47□□□□□ -0.41
RFX3-207ENST00000449190 ABCC6O95255 1503 aa12.47□□□□□ -0.41
RFX3-207ENST00000449190 NSD2O96028 1365 aa12.46□□□□□ -0.41
RFX3-207ENST00000449190 HOXC9P31274 260 aa12.46□□□□□ -0.41
RFX3-207ENST00000449190 BRWD3Q6RI45 1802 aa12.46□□□□□ -0.42
RFX3-207ENST00000449190 MYOM1P52179 1685 aa12.45□□□□□ -0.42
RFX3-207ENST00000449190 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
RFX3-207ENST00000449190 BAG6P46379 1132 aa12.45□□□□□ -0.42
RFX3-207ENST00000449190 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
RFX3-207ENST00000449190 CC2D1BQ5T0F9 858 aaKnown RBP12.45□□□□□ -0.42
RFX3-207ENST00000449190 DEFB132Q7Z7B7 95 aa12.45□□□□□ -0.42
RFX3-207ENST00000449190 RRS1Q15050 365 aaKnown RBP12.44□□□□□ -0.42
RFX3-207ENST00000449190 TRIM37O94972 964 aa12.43□□□□□ -0.42
RFX3-207ENST00000449190 IL2RBP14784 551 aa12.43□□□□□ -0.42
RFX3-207ENST00000449190 TNNT2P45379 298 aaPredicted RBP12.43□□□□□ -0.42
RFX3-207ENST00000449190 LTV1Q96GA3 475 aaPredicted RBP12.43□□□□□ -0.42
RFX3-207ENST00000449190 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
RFX3-207ENST00000449190 MARCH10Q8NA82 808 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms