RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 EVC2Q86UK5 1308 aa25.93■■□□□ 1.74
CHCHD3-203ENST00000448878 MARCH10Q8NA82 808 aaPredicted RBP25.93■■□□□ 1.74
CHCHD3-203ENST00000448878 PEAK1Q9H792 1746 aa25.92■■□□□ 1.74
CHCHD3-203ENST00000448878 ZBTB7AO95365 584 aa25.92■■□□□ 1.74
CHCHD3-203ENST00000448878 CDCA7Q9BWT1 371 aaPredicted RBP25.92■■□□□ 1.74
CHCHD3-203ENST00000448878 SLIT3O75094 1523 aa25.92■■□□□ 1.74
CHCHD3-203ENST00000448878 SBF2Q86WG5 1849 aa25.91■■□□□ 1.74
CHCHD3-203ENST00000448878 KCNH5Q8NCM2 988 aa25.91■■□□□ 1.74
CHCHD3-203ENST00000448878 PDGFDQ9GZP0 370 aaPredicted RBP25.9■■□□□ 1.74
CHCHD3-203ENST00000448878 EXOC5O00471 708 aa25.89■■□□□ 1.74
CHCHD3-203ENST00000448878 ZNF692Q9BU19 519 aaPredicted RBP25.89■■□□□ 1.74
CHCHD3-203ENST00000448878 ATF5Q9Y2D1 282 aaPredicted RBP25.89■■□□□ 1.74
CHCHD3-203ENST00000448878 ARHGEF25Q86VW2 580 aa25.88■■□□□ 1.73
CHCHD3-203ENST00000448878 PROM2Q8N271 834 aa25.88■■□□□ 1.73
CHCHD3-203ENST00000448878 STK32BQ9NY57 414 aa25.88■■□□□ 1.73
CHCHD3-203ENST00000448878 TTC21BQ7Z4L5 1316 aa25.88■■□□□ 1.73
CHCHD3-203ENST00000448878 PIK3C2AO00443 1686 aa25.87■■□□□ 1.73
CHCHD3-203ENST00000448878 CARD10Q9BWT7 1032 aa25.87■■□□□ 1.73
CHCHD3-203ENST00000448878 CPSF1Q10570 1443 aaKnown RBP25.87■■□□□ 1.73
CHCHD3-203ENST00000448878 RGPD3A6NKT7 1758 aaPredicted RBP25.87■■□□□ 1.73
CHCHD3-203ENST00000448878 RGPD4Q7Z3J3 1758 aa25.87■■□□□ 1.73
CHCHD3-203ENST00000448878 TXNRD1Q16881 649 aa25.86■■□□□ 1.73
CHCHD3-203ENST00000448878 COL18A1P39060 1754 aa25.86■■□□□ 1.73
CHCHD3-203ENST00000448878 AKAP12Q02952 1782 aa25.85■■□□□ 1.73
CHCHD3-203ENST00000448878 L3MBTL2Q969R5 705 aa25.85■■□□□ 1.73
CHCHD3-203ENST00000448878 RGPD5Q99666 1765 aa25.84■■□□□ 1.73
CHCHD3-203ENST00000448878 WNK3Q9BYP7 1800 aa25.82■■□□□ 1.72
CHCHD3-203ENST00000448878 SLC15A2Q16348 729 aa25.81■■□□□ 1.72
CHCHD3-203ENST00000448878 CASZ1Q86V15 1759 aa25.81■■□□□ 1.72
CHCHD3-203ENST00000448878 TTC21AQ8NDW8 1320 aa25.81■■□□□ 1.72
CHCHD3-203ENST00000448878 ACSBG1Q96GR2 724 aa25.8■■□□□ 1.72
CHCHD3-203ENST00000448878 KTN1Q86UP2 1357 aaKnown RBP25.8■■□□□ 1.72
CHCHD3-203ENST00000448878 TRPM1Q7Z4N2 1603 aa25.79■■□□□ 1.72
CHCHD3-203ENST00000448878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.79■■□□□ 1.729e-7■■■■□ 19.7
CHCHD3-203ENST00000448878 PTGER2P43116 358 aa25.78■■□□□ 1.72
CHCHD3-203ENST00000448878 NEUROD1Q13562 356 aa25.78■■□□□ 1.72
CHCHD3-203ENST00000448878 ROCK2O75116 1388 aaKnown RBP25.78■■□□□ 1.72
CHCHD3-203ENST00000448878 CCDC7Q96M83 1385 aa25.78■■□□□ 1.72
CHCHD3-203ENST00000448878 BCL9O00512 1426 aa25.78■■□□□ 1.72
CHCHD3-203ENST00000448878 SIN3AQ96ST3 1273 aa25.77■■□□□ 1.72
CHCHD3-203ENST00000448878 NLRP2Q9NX02 1062 aa25.77■■□□□ 1.72
CHCHD3-203ENST00000448878 FHDC1Q9C0D6 1143 aaPredicted RBP25.76■■□□□ 1.71
CHCHD3-203ENST00000448878 MYOM1P52179 1685 aa25.75■■□□□ 1.71
CHCHD3-203ENST00000448878 SYT17Q9BSW7 474 aa25.74■■□□□ 1.71
CHCHD3-203ENST00000448878 MTFR1LQ9H019 292 aa25.74■■□□□ 1.71
CHCHD3-203ENST00000448878 TNS2Q63HR2 1409 aa25.71■■□□□ 1.71
CHCHD3-203ENST00000448878 TMC1Q8TDI8 760 aa25.71■■□□□ 1.71
CHCHD3-203ENST00000448878 NFAT5O94916 1531 aa25.7■■□□□ 1.7
CHCHD3-203ENST00000448878 IL2RBP14784 551 aa25.7■■□□□ 1.7
CHCHD3-203ENST00000448878 ZNF784Q8NCA9 323 aaPredicted RBP25.69■■□□□ 1.7
CHCHD3-203ENST00000448878 NME9Q86XW9 330 aa25.68■■□□□ 1.7
CHCHD3-203ENST00000448878 ARXQ96QS3 562 aa25.67■■□□□ 1.7
CHCHD3-203ENST00000448878 ERBB3P21860 1342 aa25.66■■□□□ 1.7
CHCHD3-203ENST00000448878 ANKRD24Q8TF21 1146 aa25.66■■□□□ 1.7
CHCHD3-203ENST00000448878 NHSQ6T4R5 1651 aa25.65■■□□□ 1.7
CHCHD3-203ENST00000448878 HDGFL2Q7Z4V5 671 aaPredicted RBP25.65■■□□□ 1.7
CHCHD3-203ENST00000448878 KLHL34Q8N239 644 aa25.65■■□□□ 1.7
CHCHD3-203ENST00000448878 ABCC6O95255 1503 aa25.63■■□□□ 1.69
CHCHD3-203ENST00000448878 KAT6BQ8WYB5 2073 aa25.62■■□□□ 1.69
CHCHD3-203ENST00000448878 DDX54Q8TDD1 881 aaKnown RBP25.62■■□□□ 1.69
CHCHD3-203ENST00000448878 SGIP1Q9BQI5 828 aa25.62■■□□□ 1.69
CHCHD3-203ENST00000448878 USP31Q70CQ4 1352 aa25.61■■□□□ 1.69
CHCHD3-203ENST00000448878 MON2Q7Z3U7 1717 aa25.61■■□□□ 1.69
CHCHD3-203ENST00000448878 LTV1Q96GA3 475 aaPredicted RBP25.61■■□□□ 1.69
CHCHD3-203ENST00000448878 GPR162Q16538 588 aa25.6■■□□□ 1.69
CHCHD3-203ENST00000448878 ZNF827Q17R98 1081 aa25.6■■□□□ 1.69
CHCHD3-203ENST00000448878 CARD11Q9BXL7 1154 aa25.6■■□□□ 1.69
CHCHD3-203ENST00000448878 SLC12A5Q9H2X9 1139 aa25.6■■□□□ 1.69
CHCHD3-203ENST00000448878 LTN1O94822 1766 aa25.59■■□□□ 1.69
CHCHD3-203ENST00000448878 PELP1Q8IZL8 1130 aaKnown RBP25.58■■□□□ 1.69
CHCHD3-203ENST00000448878 SYTL4Q96C24 671 aaPredicted RBP25.58■■□□□ 1.69
CHCHD3-203ENST00000448878 LRRC4BQ9NT99 713 aa25.58■■□□□ 1.69
CHCHD3-203ENST00000448878 BTAF1O14981 1849 aa25.58■■□□□ 1.68
CHCHD3-203ENST00000448878 SBNO2Q9Y2G9 1366 aa25.56■■□□□ 1.68
CHCHD3-203ENST00000448878 TERF2IPQ9NYB0 399 aa25.56■■□□□ 1.68
CHCHD3-203ENST00000448878 SENP3-EIF4A1A0A087X0R7 540 aa25.55■■□□□ 1.68
CHCHD3-203ENST00000448878 POLD1P28340 1107 aa25.55■■□□□ 1.68
CHCHD3-203ENST00000448878 CD163L1Q9NR16 1453 aa25.53■■□□□ 1.68
CHCHD3-203ENST00000448878 TFCP2L1Q9NZI6 479 aa25.53■■□□□ 1.68
CHCHD3-203ENST00000448878 CHD4Q14839 1912 aa25.53■■□□□ 1.68
CHCHD3-203ENST00000448878 PAPPAQ13219 1627 aa25.52■■□□□ 1.68
CHCHD3-203ENST00000448878 KCNQ4P56696 695 aa25.52■■□□□ 1.68
CHCHD3-203ENST00000448878 EDC4Q6P2E9 1401 aaKnown RBP25.52■■□□□ 1.68
CHCHD3-203ENST00000448878 SLC27A3Q5K4L6 730 aa25.51■■□□□ 1.67
CHCHD3-203ENST00000448878 SLC16A10Q8TF71 515 aa25.51■■□□□ 1.67
CHCHD3-203ENST00000448878 IP6K1Q92551 441 aa25.51■■□□□ 1.67
CHCHD3-203ENST00000448878 AKT1S1Q96B36 256 aa25.5■■□□□ 1.67
CHCHD3-203ENST00000448878 USP54Q70EL1 1684 aa25.49■■□□□ 1.67
CHCHD3-203ENST00000448878 PRIM1P49642 420 aaKnown RBP25.49■■□□□ 1.67
CHCHD3-203ENST00000448878 C1QTNF8P60827 252 aa25.49■■□□□ 1.67
CHCHD3-203ENST00000448878 A0A1W2PP64 1363 aa25.48■■□□□ 1.67
CHCHD3-203ENST00000448878 MAP3K5Q99683 1374 aa25.48■■□□□ 1.67
CHCHD3-203ENST00000448878 MSH5O43196 834 aa25.48■■□□□ 1.67
CHCHD3-203ENST00000448878 AMPHP49418 695 aa25.47■■□□□ 1.67
CHCHD3-203ENST00000448878 PNPLA7Q6ZV29 1317 aa25.46■■□□□ 1.67
CHCHD3-203ENST00000448878 COG3Q96JB2 828 aa25.46■■□□□ 1.67
CHCHD3-203ENST00000448878 UTRNP46939 3433 aa25.46■■□□□ 1.67
CHCHD3-203ENST00000448878 FBLN1P23142 703 aa25.43■■□□□ 1.66
CHCHD3-203ENST00000448878 ZCRB1Q8TBF4 217 aaKnown RBP25.43■■□□□ 1.66
CHCHD3-203ENST00000448878 HOXC9P31274 260 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms