RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 KIF20BQ96Q89 1820 aa19.19■□□□□ 0.66
GTF3C3-206ENST00000448539 CSB-PGBD3P0DP91 1061 aa19.19■□□□□ 0.66
GTF3C3-206ENST00000448539 AMPHP49418 695 aa19.19■□□□□ 0.66
GTF3C3-206ENST00000448539 NRAPQ86VF7 1730 aa19.18■□□□□ 0.66
GTF3C3-206ENST00000448539 LARP1Q6PKG0 1096 aaKnown RBP19.18■□□□□ 0.66
GTF3C3-206ENST00000448539 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
GTF3C3-206ENST00000448539 SPATA31A5Q5VU36 1347 aa19.18■□□□□ 0.66
GTF3C3-206ENST00000448539 SPATA31A7Q8IWB4 1347 aa19.18■□□□□ 0.66
GTF3C3-206ENST00000448539 NSD2O96028 1365 aa19.18■□□□□ 0.66
GTF3C3-206ENST00000448539 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
GTF3C3-206ENST00000448539 A0A0G2JS52 829 aa19.17■□□□□ 0.66
GTF3C3-206ENST00000448539 MYT1Q01538 1121 aa19.17■□□□□ 0.66
GTF3C3-206ENST00000448539 USP35Q9P2H5 1018 aa19.17■□□□□ 0.66
GTF3C3-206ENST00000448539 COL5A2P05997 1499 aaPredicted RBP19.16■□□□□ 0.66
GTF3C3-206ENST00000448539 FBLN1P23142 703 aa19.16■□□□□ 0.66
GTF3C3-206ENST00000448539 RRS1Q15050 365 aaKnown RBP19.16■□□□□ 0.66
GTF3C3-206ENST00000448539 TOM1L2Q6ZVM7 507 aa19.16■□□□□ 0.66
GTF3C3-206ENST00000448539 MAP3K19Q56UN5 1328 aa19.16■□□□□ 0.66
GTF3C3-206ENST00000448539 ABCC6O95255 1503 aa19.15■□□□□ 0.66
GTF3C3-206ENST00000448539 MORC1Q86VD1 984 aa19.15■□□□□ 0.66
GTF3C3-206ENST00000448539 IP6K1Q92551 441 aa19.15■□□□□ 0.66
GTF3C3-206ENST00000448539 SPATA31A1Q5TZJ5 1347 aa19.15■□□□□ 0.66
GTF3C3-206ENST00000448539 TNNT2P45379 298 aaPredicted RBP19.14■□□□□ 0.65
GTF3C3-206ENST00000448539 FAM98CQ17RN3 349 aaKnown RBP19.14■□□□□ 0.65
GTF3C3-206ENST00000448539 WDR17Q8IZU2 1322 aa19.14■□□□□ 0.65
GTF3C3-206ENST00000448539 BRWD3Q6RI45 1802 aa19.14■□□□□ 0.65
GTF3C3-206ENST00000448539 TCP11L2Q8N4U5 519 aa19.13■□□□□ 0.65
GTF3C3-206ENST00000448539 CRB1P82279 1406 aa19.13■□□□□ 0.65
GTF3C3-206ENST00000448539 COL18A1P39060 1754 aa19.13■□□□□ 0.65
GTF3C3-206ENST00000448539 BLMP54132 1417 aaPredicted RBP19.12■□□□□ 0.65
GTF3C3-206ENST00000448539 RTL1A6NKG5 1358 aa19.12■□□□□ 0.65
GTF3C3-206ENST00000448539 PPM1GO15355 546 aaPredicted RBP19.12■□□□□ 0.65
GTF3C3-206ENST00000448539 HOXC9P31274 260 aa19.12■□□□□ 0.65
GTF3C3-206ENST00000448539 SEPT12Q8IYM1 358 aa19.12■□□□□ 0.65
GTF3C3-206ENST00000448539 ANKRD24Q8TF21 1146 aa19.12■□□□□ 0.65
GTF3C3-206ENST00000448539 THRAP3Q9Y2W1 955 aaKnown RBP19.12■□□□□ 0.65
GTF3C3-206ENST00000448539 LTN1O94822 1766 aa19.11■□□□□ 0.65
GTF3C3-206ENST00000448539 ERBB3P21860 1342 aa19.11■□□□□ 0.65
GTF3C3-206ENST00000448539 PER1O15534 1290 aaPredicted RBP19.11■□□□□ 0.65
GTF3C3-206ENST00000448539 ONECUT3O60422 494 aaPredicted RBP19.11■□□□□ 0.65
GTF3C3-206ENST00000448539 AMER1Q5JTC6 1135 aaPredicted RBP19.11■□□□□ 0.65
GTF3C3-206ENST00000448539 LTV1Q96GA3 475 aaPredicted RBP19.11■□□□□ 0.65
GTF3C3-206ENST00000448539 CC2D1BQ5T0F9 858 aaKnown RBP19.1■□□□□ 0.65
GTF3C3-206ENST00000448539 NLRP2Q9NX02 1062 aa19.1■□□□□ 0.65
GTF3C3-206ENST00000448539 KIF24Q5T7B8 1368 aa19.09■□□□□ 0.65
GTF3C3-206ENST00000448539 CNGB1Q14028 1251 aaPredicted RBP19.09■□□□□ 0.65
GTF3C3-206ENST00000448539 BARGINQ6ZT62 677 aa19.09■□□□□ 0.65
GTF3C3-206ENST00000448539 CARD10Q9BWT7 1032 aa19.09■□□□□ 0.65
GTF3C3-206ENST00000448539 EMILIN1Q9Y6C2 1016 aa19.09■□□□□ 0.65
GTF3C3-206ENST00000448539 FLT4P35916 1363 aa19.08■□□□□ 0.65
GTF3C3-206ENST00000448539 ANKRD26Q9UPS8 1709 aa19.08■□□□□ 0.64
GTF3C3-206ENST00000448539 SMG6Q86US8 1419 aaKnown RBP19.08■□□□□ 0.64
GTF3C3-206ENST00000448539 CCDC125Q86Z20 511 aa19.07■□□□□ 0.64
GTF3C3-206ENST00000448539 POLKQ9UBT6 870 aa19.07■□□□□ 0.64
GTF3C3-206ENST00000448539 RGPD5Q99666 1765 aa19.06■□□□□ 0.64
GTF3C3-206ENST00000448539 NPC1L1Q9UHC9 1359 aa19.06■□□□□ 0.64
GTF3C3-206ENST00000448539 HSP90AB2PQ58FF8 381 aa19.05■□□□□ 0.64
GTF3C3-206ENST00000448539 INSRP06213 1382 aa19.05■□□□□ 0.64
GTF3C3-206ENST00000448539 KRT27Q7Z3Y8 459 aa19.04■□□□□ 0.64
GTF3C3-206ENST00000448539 CDCA7Q9BWT1 371 aaPredicted RBP19.04■□□□□ 0.64
GTF3C3-206ENST00000448539 DDX10Q13206 875 aaKnown RBP19.02■□□□□ 0.64
GTF3C3-206ENST00000448539 PDE3BQ13370 1112 aa19.02■□□□□ 0.64
GTF3C3-206ENST00000448539 MAP2P11137 1827 aaKnown RBP19■□□□□ 0.63
GTF3C3-206ENST00000448539 PEAK1Q9H792 1746 aa19■□□□□ 0.63
GTF3C3-206ENST00000448539 THSD7AQ9UPZ6 1657 aa18.99■□□□□ 0.63
GTF3C3-206ENST00000448539 IL2RBP14784 551 aa18.99■□□□□ 0.63
GTF3C3-206ENST00000448539 DDB1Q16531 1140 aa18.99■□□□□ 0.63
GTF3C3-206ENST00000448539 SRCAPQ6ZRS2 3230 aa18.98■□□□□ 0.63
GTF3C3-206ENST00000448539 ZNF316A6NFI3 1004 aaPredicted RBP18.98■□□□□ 0.63
GTF3C3-206ENST00000448539 FAM208AQ9UK61 1670 aaKnown RBP18.98■□□□□ 0.63
GTF3C3-206ENST00000448539 EXOC5O00471 708 aa18.97■□□□□ 0.63
GTF3C3-206ENST00000448539 MTHFSP49914 203 aa18.97■□□□□ 0.63
GTF3C3-206ENST00000448539 NBPF6Q5VWK0 638 aa18.97■□□□□ 0.63
GTF3C3-206ENST00000448539 DEFB132Q7Z7B7 95 aa18.97■□□□□ 0.63
GTF3C3-206ENST00000448539 NBPF4Q96M43 638 aa18.97■□□□□ 0.63
GTF3C3-206ENST00000448539 SF3B2Q13435 895 aaKnown RBP18.96■□□□□ 0.63
GTF3C3-206ENST00000448539 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
GTF3C3-206ENST00000448539 USHBP1Q8N6Y0 703 aa18.95■□□□□ 0.62
GTF3C3-206ENST00000448539 RAPGEF4Q8WZA2 1011 aa18.95■□□□□ 0.62
GTF3C3-206ENST00000448539 DISP2A7MBM2 1401 aa18.94■□□□□ 0.62
GTF3C3-206ENST00000448539 FAM182BQ5T319 152 aa18.94■□□□□ 0.62
GTF3C3-206ENST00000448539 FAM196AQ6ZSG2 479 aa18.93■□□□□ 0.62
GTF3C3-206ENST00000448539 PARP4Q9UKK3 1724 aaKnown RBP18.92■□□□□ 0.62
GTF3C3-206ENST00000448539 TATP17735 454 aaPredicted RBP18.92■□□□□ 0.62
GTF3C3-206ENST00000448539 EYA1Q99502 592 aa18.92■□□□□ 0.62
GTF3C3-206ENST00000448539 WNK3Q9BYP7 1800 aa18.9■□□□□ 0.62
GTF3C3-206ENST00000448539 CFAP53Q96M91 514 aa18.9■□□□□ 0.62
GTF3C3-206ENST00000448539 TNS2Q63HR2 1409 aa18.9■□□□□ 0.62
GTF3C3-206ENST00000448539 LRRC37A3O60309 1634 aa18.89■□□□□ 0.62
GTF3C3-206ENST00000448539 RGPD1P0DJD0 1748 aa18.88■□□□□ 0.61
GTF3C3-206ENST00000448539 RGPD2P0DJD1 1756 aa18.88■□□□□ 0.61
GTF3C3-206ENST00000448539 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
GTF3C3-206ENST00000448539 PPP2R1AP30153 589 aa18.88■□□□□ 0.61
GTF3C3-206ENST00000448539 MARCH10Q8NA82 808 aaPredicted RBP18.88■□□□□ 0.61
GTF3C3-206ENST00000448539 ZCRB1Q8TBF4 217 aaKnown RBP18.88■□□□□ 0.61
GTF3C3-206ENST00000448539 OVOS2A0A0G2JMS6 1433 aa18.88■□□□□ 0.61
GTF3C3-206ENST00000448539 IL13P35225 146 aa18.87■□□□□ 0.61
GTF3C3-206ENST00000448539 BAG6P46379 1132 aa18.87■□□□□ 0.61
GTF3C3-206ENST00000448539 RALBP1Q15311 655 aa18.87■□□□□ 0.61
GTF3C3-206ENST00000448539 DDX54Q8TDD1 881 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms