RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 FBLN1P23142 703 aa12.38□□□□□ -0.43
CCDC18-205ENST00000447456 MEX3CQ5U5Q3 659 aaKnown RBP12.38□□□□□ -0.43
CCDC18-205ENST00000447456 MIER1Q8N108 512 aa12.38□□□□□ -0.43
CCDC18-205ENST00000447456 CDK12Q9NYV4 1490 aaPredicted RBP12.38□□□□□ -0.43
CCDC18-205ENST00000447456 BLMP54132 1417 aaPredicted RBP12.37□□□□□ -0.43
CCDC18-205ENST00000447456 ADAMTS2O95450 1211 aa12.37□□□□□ -0.43
CCDC18-205ENST00000447456 HOXC9P31274 260 aa12.37□□□□□ -0.43
CCDC18-205ENST00000447456 NUDCQ9Y266 331 aa12.37□□□□□ -0.43
CCDC18-205ENST00000447456 INSRP06213 1382 aa12.37□□□□□ -0.43
CCDC18-205ENST00000447456 LTN1O94822 1766 aa12.37□□□□□ -0.43
CCDC18-205ENST00000447456 MRS2Q9HD23 443 aa12.36□□□□□ -0.43
CCDC18-205ENST00000447456 FAM83GA6ND36 823 aa12.35□□□□□ -0.43
CCDC18-205ENST00000447456 DIAPH1O60610 1272 aaKnown RBP12.35□□□□□ -0.43
CCDC18-205ENST00000447456 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
CCDC18-205ENST00000447456 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
CCDC18-205ENST00000447456 EVA1CP58658 441 aa12.34□□□□□ -0.43
CCDC18-205ENST00000447456 HSP90AB2PQ58FF8 381 aa12.34□□□□□ -0.43
CCDC18-205ENST00000447456 NGLY1Q96IV0 654 aa12.34□□□□□ -0.43
CCDC18-205ENST00000447456 CSB-PGBD3P0DP91 1061 aa12.33□□□□□ -0.44
CCDC18-205ENST00000447456 WDR43Q15061 677 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC18-205ENST00000447456 C8orf37Q96NL8 207 aa12.33□□□□□ -0.44
CCDC18-205ENST00000447456 PEAK1Q9H792 1746 aa12.32□□□□□ -0.44
CCDC18-205ENST00000447456 ANKRD24Q8TF21 1146 aa12.32□□□□□ -0.44
CCDC18-205ENST00000447456 LTV1Q96GA3 475 aaPredicted RBP12.32□□□□□ -0.44
CCDC18-205ENST00000447456 BTG4Q9NY30 223 aa12.32□□□□□ -0.44
CCDC18-205ENST00000447456 AXIN2Q9Y2T1 843 aa12.32□□□□□ -0.44
CCDC18-205ENST00000447456 COL18A1P39060 1754 aa12.31□□□□□ -0.44
CCDC18-205ENST00000447456 LRP6O75581 1613 aa12.31□□□□□ -0.44
CCDC18-205ENST00000447456 EIF4A2Q14240 407 aaKnown RBP12.31□□□□□ -0.44
CCDC18-205ENST00000447456 ERBB3P21860 1342 aa12.31□□□□□ -0.44
CCDC18-205ENST00000447456 LMO7Q8WWI1 1683 aa12.3□□□□□ -0.44
CCDC18-205ENST00000447456 COL3A1P02461 1466 aaPredicted RBP12.3□□□□□ -0.44
CCDC18-205ENST00000447456 U2SURPO15042 1029 aaKnown RBP12.3□□□□□ -0.44
CCDC18-205ENST00000447456 IL13P35225 146 aa12.3□□□□□ -0.44
CCDC18-205ENST00000447456 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
CCDC18-205ENST00000447456 PNNQ9H307 717 aaKnown RBP12.3□□□□□ -0.44
CCDC18-205ENST00000447456 STRN4Q9NRL3 753 aa12.3□□□□□ -0.44
CCDC18-205ENST00000447456 NWD2Q9ULI1 1742 aa12.3□□□□□ -0.44
CCDC18-205ENST00000447456 WDR17Q8IZU2 1322 aa12.3□□□□□ -0.44
CCDC18-205ENST00000447456 CAMTA1Q9Y6Y1 1673 aa12.29□□□□□ -0.44
CCDC18-205ENST00000447456 COL5A2P05997 1499 aaPredicted RBP12.29□□□□□ -0.44
CCDC18-205ENST00000447456 U2AF1L5P0DN76 240 aaPredicted RBP12.29□□□□□ -0.44
CCDC18-205ENST00000447456 U2AF1Q01081 240 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC18-205ENST00000447456 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
CCDC18-205ENST00000447456 NLRP2Q9NX02 1062 aa12.29□□□□□ -0.44
CCDC18-205ENST00000447456 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
CCDC18-205ENST00000447456 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
CCDC18-205ENST00000447456 SLIT2O94813 1529 aa12.28□□□□□ -0.44
CCDC18-205ENST00000447456 NEFMP07197 916 aa12.28□□□□□ -0.44
CCDC18-205ENST00000447456 TOM1L2Q6ZVM7 507 aa12.28□□□□□ -0.44
CCDC18-205ENST00000447456 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
CCDC18-205ENST00000447456 PNISRQ8TF01 805 aaKnown RBP12.28□□□□□ -0.44
CCDC18-205ENST00000447456 CARD10Q9BWT7 1032 aa12.28□□□□□ -0.44
CCDC18-205ENST00000447456 USP21Q9UK80 565 aa12.28□□□□□ -0.44
CCDC18-205ENST00000447456 RGPD5Q99666 1765 aa12.28□□□□□ -0.44
CCDC18-205ENST00000447456 CCDC184Q52MB2 194 aa12.27□□□□□ -0.45
CCDC18-205ENST00000447456 EYA1Q99502 592 aa12.27□□□□□ -0.45
CCDC18-205ENST00000447456 AFF2P51816 1311 aa12.27□□□□□ -0.45
CCDC18-205ENST00000447456 CRB1P82279 1406 aa12.27□□□□□ -0.45
CCDC18-205ENST00000447456 FCHSD2O94868 740 aa12.26□□□□□ -0.45
CCDC18-205ENST00000447456 ZNF772Q68DY9 489 aaPredicted RBP12.26□□□□□ -0.45
CCDC18-205ENST00000447456 LARP1Q6PKG0 1096 aaKnown RBP12.26□□□□□ -0.45
CCDC18-205ENST00000447456 CCDC9Q9Y3X0 531 aaKnown RBP12.26□□□□□ -0.45
CCDC18-205ENST00000447456 IGSF1Q8N6C5 1336 aa12.26□□□□□ -0.45
CCDC18-205ENST00000447456 VPS72Q15906 364 aa12.25□□□□□ -0.45
CCDC18-205ENST00000447456 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
CCDC18-205ENST00000447456 SULT6B1Q6IMI4 303 aa12.25□□□□□ -0.45
CCDC18-205ENST00000447456 FAM9BQ8IZU0 186 aa12.25□□□□□ -0.45
CCDC18-205ENST00000447456 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
CCDC18-205ENST00000447456 THRAP3Q9Y2W1 955 aaKnown RBP12.25□□□□□ -0.45
CCDC18-205ENST00000447456 BCL9LQ86UU0 1499 aa12.24□□□□□ -0.45
CCDC18-205ENST00000447456 RAPGEF4Q8WZA2 1011 aa12.24□□□□□ -0.45
CCDC18-205ENST00000447456 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.24□□□□□ -0.45
CCDC18-205ENST00000447456 TRPC5Q9UL62 973 aaPredicted RBP12.24□□□□□ -0.45
CCDC18-205ENST00000447456 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
CCDC18-205ENST00000447456 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
CCDC18-205ENST00000447456 KDRP35968 1356 aa12.23□□□□□ -0.45
CCDC18-205ENST00000447456 SPATA31A5Q5VU36 1347 aa12.23□□□□□ -0.45
CCDC18-205ENST00000447456 SPATA31A7Q8IWB4 1347 aa12.23□□□□□ -0.45
CCDC18-205ENST00000447456 MAPK8IP3Q9UPT6 1336 aa12.23□□□□□ -0.45
CCDC18-205ENST00000447456 HMOX1P09601 288 aa12.23□□□□□ -0.45
CCDC18-205ENST00000447456 TCP11L2Q8N4U5 519 aa12.23□□□□□ -0.45
CCDC18-205ENST00000447456 CDCA7Q9BWT1 371 aaPredicted RBP12.23□□□□□ -0.45
CCDC18-205ENST00000447456 RGPD1P0DJD0 1748 aa12.23□□□□□ -0.45
CCDC18-205ENST00000447456 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
CCDC18-205ENST00000447456 PLEKHG2Q9H7P9 1386 aa12.22□□□□□ -0.45
CCDC18-205ENST00000447456 SPATA31A1Q5TZJ5 1347 aa12.22□□□□□ -0.45
CCDC18-205ENST00000447456 TATP17735 454 aaPredicted RBP12.22□□□□□ -0.45
CCDC18-205ENST00000447456 USHBP1Q8N6Y0 703 aa12.22□□□□□ -0.45
CCDC18-205ENST00000447456 RSPH6AQ9H0K4 717 aa12.22□□□□□ -0.45
CCDC18-205ENST00000447456 PRKAR2BP31323 418 aa12.21□□□□□ -0.45
CCDC18-205ENST00000447456 AEBP1Q8IUX7 1158 aa12.21□□□□□ -0.45
CCDC18-205ENST00000447456 RUNDC1Q96C34 613 aa12.21□□□□□ -0.45
CCDC18-205ENST00000447456 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.45
CCDC18-205ENST00000447456 USP35Q9P2H5 1018 aa12.21□□□□□ -0.45
CCDC18-205ENST00000447456 ATRNO75882 1429 aa12.2□□□□□ -0.46
CCDC18-205ENST00000447456 IL2RBP14784 551 aa12.2□□□□□ -0.46
CCDC18-205ENST00000447456 AMOTQ4VCS5 1084 aa12.2□□□□□ -0.46
CCDC18-205ENST00000447456 PLEKHO1Q53GL0 409 aaPredicted RBP12.2□□□□□ -0.46
CCDC18-205ENST00000447456 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms