RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 GCP02774 474 aa17.95■□□□□ 0.46
SSR4-205ENST00000447375 MARCH10Q8NA82 808 aaPredicted RBP17.95■□□□□ 0.46
SSR4-205ENST00000447375 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
SSR4-205ENST00000447375 SBF2Q86WG5 1849 aa17.95■□□□□ 0.46
SSR4-205ENST00000447375 NLRP13Q86W25 1043 aa17.94■□□□□ 0.46
SSR4-205ENST00000447375 ARHGEF28Q8N1W1 1705 aaKnown RBP17.94■□□□□ 0.46
SSR4-205ENST00000447375 USP19O94966 1318 aa17.94■□□□□ 0.46
SSR4-205ENST00000447375 POLR3AO14802 1390 aaPredicted RBP17.93■□□□□ 0.46
SSR4-205ENST00000447375 MAP3K5Q99683 1374 aa17.93■□□□□ 0.46
SSR4-205ENST00000447375 ZBTB7CA1YPR0 619 aa17.93■□□□□ 0.46
SSR4-205ENST00000447375 TOM1L2Q6ZVM7 507 aa17.93■□□□□ 0.46
SSR4-205ENST00000447375 CDK19Q9BWU1 502 aa17.92■□□□□ 0.46
SSR4-205ENST00000447375 BCL9O00512 1426 aa17.91■□□□□ 0.46
SSR4-205ENST00000447375 ITSN1Q15811 1721 aa17.91■□□□□ 0.46
SSR4-205ENST00000447375 LRRC37A3O60309 1634 aa17.9■□□□□ 0.46
SSR4-205ENST00000447375 PLEKHG3A1L390 1219 aa17.9■□□□□ 0.46
SSR4-205ENST00000447375 NEUROD1Q13562 356 aa17.9■□□□□ 0.46
SSR4-205ENST00000447375 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
SSR4-205ENST00000447375 CDCA7Q9BWT1 371 aaPredicted RBP17.9■□□□□ 0.46
SSR4-205ENST00000447375 CCDC61Q9Y6R9 512 aa17.9■□□□□ 0.46
SSR4-205ENST00000447375 L3MBTL2Q969R5 705 aa17.89■□□□□ 0.45
SSR4-205ENST00000447375 KLHL34Q8N239 644 aa17.88■□□□□ 0.45
SSR4-205ENST00000447375 AATKQ6ZMQ8 1374 aa17.87■□□□□ 0.45
SSR4-205ENST00000447375 EXOC5O00471 708 aa17.85■□□□□ 0.45
SSR4-205ENST00000447375 SHANK3Q9BYB0 1731 aa17.84■□□□□ 0.45
SSR4-205ENST00000447375 WDR17Q8IZU2 1322 aa17.83■□□□□ 0.44
SSR4-205ENST00000447375 POLD1P28340 1107 aa17.82■□□□□ 0.44
SSR4-205ENST00000447375 AXIN2Q9Y2T1 843 aa17.82■□□□□ 0.44
SSR4-205ENST00000447375 TOPAZ1Q8N9V7 1692 aa17.82■□□□□ 0.44
SSR4-205ENST00000447375 GOLGB1Q14789 3259 aaKnown RBP17.82■□□□□ 0.44
SSR4-205ENST00000447375 NLRP6P59044 892 aa17.81■□□□□ 0.44
SSR4-205ENST00000447375 ZNF827Q17R98 1081 aa17.81■□□□□ 0.44
SSR4-205ENST00000447375 KIAA1210Q9ULL0 1709 aa17.81■□□□□ 0.44
SSR4-205ENST00000447375 GRIN3BO60391 1043 aa17.8■□□□□ 0.44
SSR4-205ENST00000447375 HSPA6P17066 643 aa17.8■□□□□ 0.44
SSR4-205ENST00000447375 NLGN2Q8NFZ4 835 aa17.8■□□□□ 0.44
SSR4-205ENST00000447375 SLC16A10Q8TF71 515 aa17.8■□□□□ 0.44
SSR4-205ENST00000447375 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
SSR4-205ENST00000447375 CSB-PGBD3P0DP91 1061 aa17.79■□□□□ 0.44
SSR4-205ENST00000447375 ACSBG1Q96GR2 724 aa17.79■□□□□ 0.44
SSR4-205ENST00000447375 CARD10Q9BWT7 1032 aa17.79■□□□□ 0.44
SSR4-205ENST00000447375 NBPF1Q3BBV0 1214 aa17.78■□□□□ 0.44
SSR4-205ENST00000447375 YBX3P16989 372 aaKnown RBP eCLIP17.77■□□□□ 0.446e-14■■■□□ 18.7
SSR4-205ENST00000447375 GPBP1L1Q9HC44 474 aaPredicted RBP17.77■□□□□ 0.44
SSR4-205ENST00000447375 BRD4O60885 1362 aaPredicted RBP17.77■□□□□ 0.43
SSR4-205ENST00000447375 CLSPNQ9HAW4 1339 aa17.76■□□□□ 0.43
SSR4-205ENST00000447375 ATP10DQ9P241 1426 aa17.76■□□□□ 0.43
SSR4-205ENST00000447375 LRRC4BQ9NT99 713 aa17.76■□□□□ 0.43
SSR4-205ENST00000447375 WNK3Q9BYP7 1800 aa17.75■□□□□ 0.43
SSR4-205ENST00000447375 PPIP5K1Q6PFW1 1433 aa17.75■□□□□ 0.43
SSR4-205ENST00000447375 SRPK2P78362 688 aaKnown RBP17.75■□□□□ 0.43
SSR4-205ENST00000447375 AKT1S1Q96B36 256 aa17.75■□□□□ 0.43
SSR4-205ENST00000447375 PAPPAQ13219 1627 aa17.75■□□□□ 0.43
SSR4-205ENST00000447375 TONSLQ96HA7 1378 aa17.75■□□□□ 0.43
SSR4-205ENST00000447375 SLIT3O75094 1523 aa17.74■□□□□ 0.43
SSR4-205ENST00000447375 ARHGEF25Q86VW2 580 aa17.74■□□□□ 0.43
SSR4-205ENST00000447375 COL18A1P39060 1754 aa17.74■□□□□ 0.43
SSR4-205ENST00000447375 USP6P35125 1406 aa17.72■□□□□ 0.43
SSR4-205ENST00000447375 CABP2Q9NPB3 220 aa17.72■□□□□ 0.43
SSR4-205ENST00000447375 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
SSR4-205ENST00000447375 NHSQ6T4R5 1651 aa17.71■□□□□ 0.43
SSR4-205ENST00000447375 QRICH2Q9H0J4 1663 aa17.71■□□□□ 0.43
SSR4-205ENST00000447375 CCDC7Q96M83 1385 aa17.71■□□□□ 0.43
SSR4-205ENST00000447375 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
SSR4-205ENST00000447375 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
SSR4-205ENST00000447375 ZNF526Q8TF50 670 aaPredicted RBP17.7■□□□□ 0.42
SSR4-205ENST00000447375 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
SSR4-205ENST00000447375 CABP1Q9NZU7 370 aa17.7■□□□□ 0.42
SSR4-205ENST00000447375 SOX12O15370 315 aa17.69■□□□□ 0.42
SSR4-205ENST00000447375 SLC27A3Q5K4L6 730 aa17.69■□□□□ 0.42
SSR4-205ENST00000447375 KCNH5Q8NCM2 988 aa17.69■□□□□ 0.42
SSR4-205ENST00000447375 TIMELESSQ9UNS1 1208 aa17.68■□□□□ 0.42
SSR4-205ENST00000447375 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
SSR4-205ENST00000447375 COL24A1Q17RW2 1714 aa17.66■□□□□ 0.42
SSR4-205ENST00000447375 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
SSR4-205ENST00000447375 TRPM1Q7Z4N2 1603 aa17.65■□□□□ 0.42
SSR4-205ENST00000447375 BTAF1O14981 1849 aa17.64■□□□□ 0.41
SSR4-205ENST00000447375 IL2RBP14784 551 aa17.64■□□□□ 0.41
SSR4-205ENST00000447375 RGPD5Q99666 1765 aa17.63■□□□□ 0.41
SSR4-205ENST00000447375 ABCC6O95255 1503 aa17.63■□□□□ 0.41
SSR4-205ENST00000447375 KCNQ4P56696 695 aa17.63■□□□□ 0.41
SSR4-205ENST00000447375 NLRP2Q9NX02 1062 aa17.63■□□□□ 0.41
SSR4-205ENST00000447375 PIK3C2AO00443 1686 aa17.62■□□□□ 0.41
SSR4-205ENST00000447375 QSER1Q2KHR3 1735 aa17.62■□□□□ 0.41
SSR4-205ENST00000447375 MSH5O43196 834 aa17.62■□□□□ 0.41
SSR4-205ENST00000447375 CENPJQ9HC77 1338 aaPredicted RBP17.62■□□□□ 0.41
SSR4-205ENST00000447375 ADCY9O60503 1353 aa17.62■□□□□ 0.41
SSR4-205ENST00000447375 APLP1P51693 650 aa17.61■□□□□ 0.41
SSR4-205ENST00000447375 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
SSR4-205ENST00000447375 CARD11Q9BXL7 1154 aa17.6■□□□□ 0.41
SSR4-205ENST00000447375 KIF3CO14782 793 aa17.59■□□□□ 0.41
SSR4-205ENST00000447375 COL23A1Q86Y22 540 aaPredicted RBP17.59■□□□□ 0.41
SSR4-205ENST00000447375 DNAJC5GQ8N7S2 189 aa17.59■□□□□ 0.41
SSR4-205ENST00000447375 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
SSR4-205ENST00000447375 CD2APQ9Y5K6 639 aa17.59■□□□□ 0.41
SSR4-205ENST00000447375 ERBB3P21860 1342 aa17.57■□□□□ 0.4
SSR4-205ENST00000447375 MSL1Q68DK7 614 aa17.57■□□□□ 0.4
SSR4-205ENST00000447375 DDX54Q8TDD1 881 aaKnown RBP17.57■□□□□ 0.4
SSR4-205ENST00000447375 SYTL4Q96C24 671 aaPredicted RBP17.57■□□□□ 0.4
SSR4-205ENST00000447375 TTC21AQ8NDW8 1320 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms