RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 CRB1P82279 1406 aa10.47□□□□□ -0.73
LRRC28-203ENST00000447360 PHRF1Q9P1Y6 1649 aaKnown RBP10.47□□□□□ -0.73
LRRC28-203ENST00000447360 RGPD3A6NKT7 1758 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-203ENST00000447360 RGPD4Q7Z3J3 1758 aa10.47□□□□□ -0.73
LRRC28-203ENST00000447360 SLC15A2Q16348 729 aa10.46□□□□□ -0.73
LRRC28-203ENST00000447360 NLRP13Q86W25 1043 aa10.46□□□□□ -0.73
LRRC28-203ENST00000447360 SGIP1Q9BQI5 828 aa10.46□□□□□ -0.73
LRRC28-203ENST00000447360 CDK19Q9BWU1 502 aa10.46□□□□□ -0.73
LRRC28-203ENST00000447360 STK32BQ9NY57 414 aa10.46□□□□□ -0.73
LRRC28-203ENST00000447360 COL5A2P05997 1499 aaPredicted RBP10.46□□□□□ -0.74
LRRC28-203ENST00000447360 CASZ1Q86V15 1759 aa10.45□□□□□ -0.74
LRRC28-203ENST00000447360 PARP4Q9UKK3 1724 aaKnown RBP10.45□□□□□ -0.74
LRRC28-203ENST00000447360 LMO7Q8WWI1 1683 aa10.45□□□□□ -0.74
LRRC28-203ENST00000447360 PTF1AQ7RTS3 328 aa10.45□□□□□ -0.74
LRRC28-203ENST00000447360 CDCA7Q9BWT1 371 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-203ENST00000447360 MAP3K5Q99683 1374 aa10.44□□□□□ -0.74
LRRC28-203ENST00000447360 TXNRD1Q16881 649 aa10.44□□□□□ -0.74
LRRC28-203ENST00000447360 PEAK1Q9H792 1746 aa10.44□□□□□ -0.74
LRRC28-203ENST00000447360 AATKQ6ZMQ8 1374 aa10.43□□□□□ -0.74
LRRC28-203ENST00000447360 GIGYF1O75420 1035 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-203ENST00000447360 TOM1L2Q6ZVM7 507 aa10.43□□□□□ -0.74
LRRC28-203ENST00000447360 MARCH10Q8NA82 808 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-203ENST00000447360 ARXQ96QS3 562 aa10.43□□□□□ -0.74
LRRC28-203ENST00000447360 BRD4O60885 1362 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-203ENST00000447360 MYOM1P52179 1685 aa10.42□□□□□ -0.74
LRRC28-203ENST00000447360 DCAF11Q8TEB1 546 aa10.42□□□□□ -0.74
LRRC28-203ENST00000447360 KDM2AQ9Y2K7 1162 aa10.42□□□□□ -0.74
LRRC28-203ENST00000447360 ITSN1Q15811 1721 aa10.41□□□□□ -0.74
LRRC28-203ENST00000447360 GPR162Q16538 588 aa10.41□□□□□ -0.74
LRRC28-203ENST00000447360 WDR17Q8IZU2 1322 aa10.4□□□□□ -0.74
LRRC28-203ENST00000447360 EXOC5O00471 708 aa10.39□□□□□ -0.75
LRRC28-203ENST00000447360 NLRP6P59044 892 aa10.39□□□□□ -0.75
LRRC28-203ENST00000447360 CARD10Q9BWT7 1032 aa10.39□□□□□ -0.75
LRRC28-203ENST00000447360 LRRC37A3O60309 1634 aa10.38□□□□□ -0.75
LRRC28-203ENST00000447360 ZBTB7CA1YPR0 619 aa10.38□□□□□ -0.75
LRRC28-203ENST00000447360 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
LRRC28-203ENST00000447360 CHD4Q14839 1912 aa10.37□□□□□ -0.75
LRRC28-203ENST00000447360 SLC16A10Q8TF71 515 aa10.37□□□□□ -0.75
LRRC28-203ENST00000447360 SBF2Q86WG5 1849 aa10.37□□□□□ -0.75
LRRC28-203ENST00000447360 PPIP5K1Q6PFW1 1433 aa10.36□□□□□ -0.75
LRRC28-203ENST00000447360 SRPK2P78362 688 aaKnown RBP10.36□□□□□ -0.75
LRRC28-203ENST00000447360 ARHGEF25Q86VW2 580 aa10.36□□□□□ -0.75
LRRC28-203ENST00000447360 TOPAZ1Q8N9V7 1692 aa10.36□□□□□ -0.75
LRRC28-203ENST00000447360 SLIT3O75094 1523 aa10.35□□□□□ -0.75
LRRC28-203ENST00000447360 POLD1P28340 1107 aa10.35□□□□□ -0.75
LRRC28-203ENST00000447360 KCNH5Q8NCM2 988 aa10.35□□□□□ -0.75
LRRC28-203ENST00000447360 USP6P35125 1406 aa10.34□□□□□ -0.75
LRRC28-203ENST00000447360 ARHGEF28Q8N1W1 1705 aaKnown RBP10.34□□□□□ -0.75
LRRC28-203ENST00000447360 GRIN3BO60391 1043 aa10.34□□□□□ -0.75
LRRC28-203ENST00000447360 CSB-PGBD3P0DP91 1061 aa10.34□□□□□ -0.75
LRRC28-203ENST00000447360 CCDC7Q96M83 1385 aa10.34□□□□□ -0.75
LRRC28-203ENST00000447360 CPSF1Q10570 1443 aaKnown RBP10.33□□□□□ -0.76
LRRC28-203ENST00000447360 CABP2Q9NPB3 220 aa10.33□□□□□ -0.76
LRRC28-203ENST00000447360 CABP1Q9NZU7 370 aa10.33□□□□□ -0.76
LRRC28-203ENST00000447360 TNS2Q63HR2 1409 aa10.33□□□□□ -0.76
LRRC28-203ENST00000447360 ZNF827Q17R98 1081 aa10.32□□□□□ -0.76
LRRC28-203ENST00000447360 PELP1Q8IZL8 1130 aaKnown RBP10.32□□□□□ -0.76
LRRC28-203ENST00000447360 AKT1S1Q96B36 256 aa10.32□□□□□ -0.76
LRRC28-203ENST00000447360 ACSBG1Q96GR2 724 aa10.32□□□□□ -0.76
LRRC28-203ENST00000447360 LRRC4BQ9NT99 713 aa10.32□□□□□ -0.76
LRRC28-203ENST00000447360 SLC27A3Q5K4L6 730 aa10.31□□□□□ -0.76
LRRC28-203ENST00000447360 KLHL34Q8N239 644 aa10.31□□□□□ -0.76
LRRC28-203ENST00000447360 COL18A1P39060 1754 aa10.31□□□□□ -0.76
LRRC28-203ENST00000447360 CENPJQ9HC77 1338 aaPredicted RBP10.31□□□□□ -0.76
LRRC28-203ENST00000447360 PAPPAQ13219 1627 aa10.3□□□□□ -0.76
LRRC28-203ENST00000447360 HSPA6P17066 643 aa10.3□□□□□ -0.76
LRRC28-203ENST00000447360 ZNF692Q9BU19 519 aaPredicted RBP10.3□□□□□ -0.76
LRRC28-203ENST00000447360 NLGN2Q8NFZ4 835 aa10.29□□□□□ -0.76
LRRC28-203ENST00000447360 SHANK3Q9BYB0 1731 aa10.29□□□□□ -0.76
LRRC28-203ENST00000447360 PNPLA7Q6ZV29 1317 aa10.29□□□□□ -0.76
LRRC28-203ENST00000447360 TTC21BQ7Z4L5 1316 aa10.29□□□□□ -0.76
LRRC28-203ENST00000447360 AKAP12Q02952 1782 aa10.29□□□□□ -0.76
LRRC28-203ENST00000447360 RAB3GAP2Q9H2M9 1393 aa10.28□□□□□ -0.76
LRRC28-203ENST00000447360 IL2RBP14784 551 aa10.28□□□□□ -0.76
LRRC28-203ENST00000447360 YBX3P16989 372 aaKnown RBP eCLIP10.28□□□□□ -0.761e-6■■■□□ 17.7
LRRC28-203ENST00000447360 NBPF1Q3BBV0 1214 aa10.28□□□□□ -0.76
LRRC28-203ENST00000447360 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
LRRC28-203ENST00000447360 TFCP2L1Q9NZI6 479 aa10.28□□□□□ -0.76
LRRC28-203ENST00000447360 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
LRRC28-203ENST00000447360 NHSQ6T4R5 1651 aa10.28□□□□□ -0.76
LRRC28-203ENST00000447360 ABCC6O95255 1503 aa10.28□□□□□ -0.76
LRRC28-203ENST00000447360 TRPM1Q7Z4N2 1603 aa10.27□□□□□ -0.77
LRRC28-203ENST00000447360 SOX12O15370 315 aa10.27□□□□□ -0.77
LRRC28-203ENST00000447360 WNK3Q9BYP7 1800 aa10.27□□□□□ -0.77
LRRC28-203ENST00000447360 ERBB3P21860 1342 aa10.27□□□□□ -0.77
LRRC28-203ENST00000447360 ATP10DQ9P241 1426 aa10.26□□□□□ -0.77
LRRC28-203ENST00000447360 ATXN8OSP0DMR3 200 aa10.26□□□□□ -0.77
LRRC28-203ENST00000447360 NLRP2Q9NX02 1062 aa10.26□□□□□ -0.77
LRRC28-203ENST00000447360 PIK3C2AO00443 1686 aa10.25□□□□□ -0.77
LRRC28-203ENST00000447360 EVC2Q86UK5 1308 aa10.25□□□□□ -0.77
LRRC28-203ENST00000447360 NFAT5O94916 1531 aa10.23□□□□□ -0.77
LRRC28-203ENST00000447360 CD2APQ9Y5K6 639 aa10.23□□□□□ -0.77
LRRC28-203ENST00000447360 COL24A1Q17RW2 1714 aa10.23□□□□□ -0.77
LRRC28-203ENST00000447360 KIAA1210Q9ULL0 1709 aa10.23□□□□□ -0.77
LRRC28-203ENST00000447360 ADCY9O60503 1353 aa10.23□□□□□ -0.77
LRRC28-203ENST00000447360 ANKRD24Q8TF21 1146 aa10.22□□□□□ -0.77
LRRC28-203ENST00000447360 QRICH2Q9H0J4 1663 aa10.22□□□□□ -0.77
LRRC28-203ENST00000447360 BTAF1O14981 1849 aa10.21□□□□□ -0.77
LRRC28-203ENST00000447360 HMGB2P26583 209 aaKnown RBP10.21□□□□□ -0.77
LRRC28-203ENST00000447360 DDX54Q8TDD1 881 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms