RNA–Protein interactions for RNA: ENST00000446930.1

RGPD6-204, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-204ENST00000446930 WDR17Q8IZU2 1322 aa25.12■■□□□ 1.61
RGPD6-204ENST00000446930 TRIM37O94972 964 aa25.11■■□□□ 1.61
RGPD6-204ENST00000446930 CAMKK2Q96RR4 588 aa25.11■■□□□ 1.61
RGPD6-204ENST00000446930 RREB1Q92766 1687 aa25.1■■□□□ 1.61
RGPD6-204ENST00000446930 RGPD5Q99666 1765 aa25.09■■□□□ 1.61
RGPD6-204ENST00000446930 AXIN2Q9Y2T1 843 aa25.09■■□□□ 1.61
RGPD6-204ENST00000446930 OVOS2A0A0G2JMS6 1433 aa25.07■■□□□ 1.6
RGPD6-204ENST00000446930 OVOS2A0A0J9YW53 1432 aa25.07■■□□□ 1.6
RGPD6-204ENST00000446930 OVOS2Q6IE36 1432 aa25.07■■□□□ 1.6
RGPD6-204ENST00000446930 TRIM26Q12899 539 aaPredicted RBP25.07■■□□□ 1.6
RGPD6-204ENST00000446930 CDCA7Q9BWT1 371 aaPredicted RBP25.07■■□□□ 1.6
RGPD6-204ENST00000446930 EDC4Q6P2E9 1401 aaKnown RBP25.06■■□□□ 1.6
RGPD6-204ENST00000446930 TOM1L2Q6ZVM7 507 aa25.06■■□□□ 1.6
RGPD6-204ENST00000446930 RGPD3A6NKT7 1758 aaPredicted RBP25.05■■□□□ 1.6
RGPD6-204ENST00000446930 RGPD4Q7Z3J3 1758 aa25.05■■□□□ 1.6
RGPD6-204ENST00000446930 ZBTB7CA1YPR0 619 aa25.05■■□□□ 1.6
RGPD6-204ENST00000446930 APBA3O96018 575 aa25.05■■□□□ 1.6
RGPD6-204ENST00000446930 EZH2Q15910 746 aaKnown RBP25.05■■□□□ 1.6
RGPD6-204ENST00000446930 SBF2Q86WG5 1849 aa25.05■■□□□ 1.6
RGPD6-204ENST00000446930 NINLQ9Y2I6 1382 aa25.05■■□□□ 1.6
RGPD6-204ENST00000446930 BCL9O00512 1426 aa25.04■■□□□ 1.6
RGPD6-204ENST00000446930 SLC24A1O60721 1099 aa25.04■■□□□ 1.6
RGPD6-204ENST00000446930 CARD10Q9BWT7 1032 aa25.03■■□□□ 1.6
RGPD6-204ENST00000446930 NUP188Q5SRE5 1749 aa25.03■■□□□ 1.6
RGPD6-204ENST00000446930 PSDA5PKW4 1024 aaPredicted RBP25.02■■□□□ 1.6
RGPD6-204ENST00000446930 DDB1Q16531 1140 aa25.02■■□□□ 1.6
RGPD6-204ENST00000446930 HDGFL2Q7Z4V5 671 aaPredicted RBP25.02■■□□□ 1.6
RGPD6-204ENST00000446930 TESK2Q96S53 571 aa25.02■■□□□ 1.6
RGPD6-204ENST00000446930 TERF2IPQ9NYB0 399 aa25.02■■□□□ 1.6
RGPD6-204ENST00000446930 A0A1W2PP64 1363 aa25.01■■□□□ 1.59
RGPD6-204ENST00000446930 LTN1O94822 1766 aa25■■□□□ 1.59
RGPD6-204ENST00000446930 SLC12A5Q9H2X9 1139 aa25■■□□□ 1.59
RGPD6-204ENST00000446930 CCDC7Q96M83 1385 aa25■■□□□ 1.59
RGPD6-204ENST00000446930 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.99■■□□□ 1.59
RGPD6-204ENST00000446930 R3HDM1Q15032 1099 aaKnown RBP24.98■■□□□ 1.59
RGPD6-204ENST00000446930 NME9Q86XW9 330 aa24.98■■□□□ 1.59
RGPD6-204ENST00000446930 TMC1Q8TDI8 760 aa24.98■■□□□ 1.59
RGPD6-204ENST00000446930 SOX12O15370 315 aa24.97■■□□□ 1.59
RGPD6-204ENST00000446930 ST20-MTHFSA0A0A6YYL1 179 aa24.96■■□□□ 1.59
RGPD6-204ENST00000446930 ERBB3P21860 1342 aa24.95■■□□□ 1.58
RGPD6-204ENST00000446930 PLSCR1O15162 318 aa24.94■■□□□ 1.58
RGPD6-204ENST00000446930 CSB-PGBD3P0DP91 1061 aa24.94■■□□□ 1.58
RGPD6-204ENST00000446930 MARCH10Q8NA82 808 aaPredicted RBP24.93■■□□□ 1.58
RGPD6-204ENST00000446930 TNS2Q63HR2 1409 aa24.93■■□□□ 1.58
RGPD6-204ENST00000446930 BCL11BQ9C0K0 894 aaPredicted RBP24.92■■□□□ 1.58
RGPD6-204ENST00000446930 NBPF14Q5TI25 921 aa24.9■■□□□ 1.58
RGPD6-204ENST00000446930 FAM208AQ9UK61 1670 aaKnown RBP24.89■■□□□ 1.58
RGPD6-204ENST00000446930 EXOC5O00471 708 aa24.88■■□□□ 1.57
RGPD6-204ENST00000446930 ANKRD36BQ8N2N9 1353 aa24.88■■□□□ 1.57
RGPD6-204ENST00000446930 USP47Q96K76 1375 aa24.87■■□□□ 1.57
RGPD6-204ENST00000446930 TIMELESSQ9UNS1 1208 aa24.86■■□□□ 1.57
RGPD6-204ENST00000446930 CLSPNQ9HAW4 1339 aa24.85■■□□□ 1.57
RGPD6-204ENST00000446930 NHSQ6T4R5 1651 aa24.85■■□□□ 1.57
RGPD6-204ENST00000446930 ANKRD24Q8TF21 1146 aa24.84■■□□□ 1.57
RGPD6-204ENST00000446930 NLRP2Q9NX02 1062 aa24.84■■□□□ 1.57
RGPD6-204ENST00000446930 IP6K1Q92551 441 aa24.83■■□□□ 1.57
RGPD6-204ENST00000446930 IL2RBP14784 551 aa24.82■■□□□ 1.56
RGPD6-204ENST00000446930 TMF1P82094 1093 aa24.82■■□□□ 1.56
RGPD6-204ENST00000446930 PTF1AQ7RTS3 328 aa24.82■■□□□ 1.56
RGPD6-204ENST00000446930 COG3Q96JB2 828 aa24.81■■□□□ 1.56
RGPD6-204ENST00000446930 CDCA8Q53HL2 280 aa24.79■■□□□ 1.56
RGPD6-204ENST00000446930 PROM2Q8N271 834 aa24.78■■□□□ 1.56
RGPD6-204ENST00000446930 RTL1A6NKG5 1358 aa24.78■■□□□ 1.56
RGPD6-204ENST00000446930 MAP3K19Q56UN5 1328 aa24.77■■□□□ 1.56
RGPD6-204ENST00000446930 CASZ1Q86V15 1759 aa24.77■■□□□ 1.56
RGPD6-204ENST00000446930 HOXC9P31274 260 aa24.74■■□□□ 1.55
RGPD6-204ENST00000446930 ANO8Q9HCE9 1232 aaPredicted RBP24.74■■□□□ 1.55
RGPD6-204ENST00000446930 MYOM1P52179 1685 aa24.74■■□□□ 1.55
RGPD6-204ENST00000446930 KIF20BQ96Q89 1820 aa24.73■■□□□ 1.55
RGPD6-204ENST00000446930 FYB1O15117 783 aa24.73■■□□□ 1.55
RGPD6-204ENST00000446930 TXNRD1Q16881 649 aa24.73■■□□□ 1.55
RGPD6-204ENST00000446930 SPON1Q9HCB6 807 aa24.73■■□□□ 1.55
RGPD6-204ENST00000446930 BTAF1O14981 1849 aa24.72■■□□□ 1.55
RGPD6-204ENST00000446930 KCNQ2O43526 872 aa24.72■■□□□ 1.55
RGPD6-204ENST00000446930 AMPHP49418 695 aa24.7■■□□□ 1.54
RGPD6-204ENST00000446930 KIF24Q5T7B8 1368 aa24.69■■□□□ 1.54
RGPD6-204ENST00000446930 PAPPAQ13219 1627 aa24.69■■□□□ 1.54
RGPD6-204ENST00000446930 RGPD2P0DJD1 1756 aa24.69■■□□□ 1.54
RGPD6-204ENST00000446930 SHANK3Q9BYB0 1731 aa24.67■■□□□ 1.54
RGPD6-204ENST00000446930 GGNBP2Q9H3C7 697 aa24.66■■□□□ 1.54
RGPD6-204ENST00000446930 KAT6BQ8WYB5 2073 aa24.66■■□□□ 1.54
RGPD6-204ENST00000446930 FBLN1P23142 703 aa24.65■■□□□ 1.54
RGPD6-204ENST00000446930 LTV1Q96GA3 475 aaPredicted RBP24.65■■□□□ 1.54
RGPD6-204ENST00000446930 ACSBG1Q96GR2 724 aa24.65■■□□□ 1.54
RGPD6-204ENST00000446930 SLC15A2Q16348 729 aa24.64■■□□□ 1.54
RGPD6-204ENST00000446930 STK32BQ9NY57 414 aa24.64■■□□□ 1.54
RGPD6-204ENST00000446930 CGNL1Q0VF96 1302 aa24.63■■□□□ 1.53
RGPD6-204ENST00000446930 SMG6Q86US8 1419 aaKnown RBP24.63■■□□□ 1.53
RGPD6-204ENST00000446930 MEGF6O75095 1541 aa24.63■■□□□ 1.53
RGPD6-204ENST00000446930 RRS1Q15050 365 aaKnown RBP24.63■■□□□ 1.53
RGPD6-204ENST00000446930 INSRP06213 1382 aa24.63■■□□□ 1.53
RGPD6-204ENST00000446930 ANKRD26Q9UPS8 1709 aa24.62■■□□□ 1.53
RGPD6-204ENST00000446930 CARD14Q9BXL6 1004 aa24.62■■□□□ 1.53
RGPD6-204ENST00000446930 FLT4P35916 1363 aa24.62■■□□□ 1.53
RGPD6-204ENST00000446930 PPP1R1BQ9UD71 204 aaPredicted RBP24.6■■□□□ 1.53
RGPD6-204ENST00000446930 DOT1LQ8TEK3 1739 aa24.6■■□□□ 1.53
RGPD6-204ENST00000446930 NSD3Q9BZ95 1437 aa24.6■■□□□ 1.53
RGPD6-204ENST00000446930 NBPF6Q5VWK0 638 aa24.59■■□□□ 1.53
RGPD6-204ENST00000446930 ZCRB1Q8TBF4 217 aaKnown RBP24.59■■□□□ 1.53
RGPD6-204ENST00000446930 DDX54Q8TDD1 881 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms