RNA–Protein interactions for RNA: ENST00000446276.5

MACF1-208, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-208ENST00000446276 KIAA0232Q92628 1395 aa15.84■□□□□ 0.13
MACF1-208ENST00000446276 HOXC9P31274 260 aa15.84■□□□□ 0.13
MACF1-208ENST00000446276 HSP90AB2PQ58FF8 381 aa15.83■□□□□ 0.12
MACF1-208ENST00000446276 PEAK1Q9H792 1746 aa15.83■□□□□ 0.12
MACF1-208ENST00000446276 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.12
MACF1-208ENST00000446276 SPATA31A6Q5VVP1 1343 aa15.82■□□□□ 0.12
MACF1-208ENST00000446276 PRDM11Q9NQV5 511 aa15.82■□□□□ 0.12
MACF1-208ENST00000446276 PNISRQ8TF01 805 aaKnown RBP15.82■□□□□ 0.12
MACF1-208ENST00000446276 LTN1O94822 1766 aa15.81■□□□□ 0.12
MACF1-208ENST00000446276 ZBTB7CA1YPR0 619 aa15.81■□□□□ 0.12
MACF1-208ENST00000446276 ABCC6O95255 1503 aa15.81■□□□□ 0.12
MACF1-208ENST00000446276 DIAPH1O60610 1272 aaKnown RBP15.81■□□□□ 0.12
MACF1-208ENST00000446276 AXIN2Q9Y2T1 843 aa15.8■□□□□ 0.12
MACF1-208ENST00000446276 BLMP54132 1417 aaPredicted RBP15.8■□□□□ 0.12
MACF1-208ENST00000446276 IL13P35225 146 aa15.8■□□□□ 0.12
MACF1-208ENST00000446276 CHRNA2Q15822 529 aa15.8■□□□□ 0.12
MACF1-208ENST00000446276 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
MACF1-208ENST00000446276 NUTM2BA6NNL0 878 aaPredicted RBP15.79■□□□□ 0.12
MACF1-208ENST00000446276 NUTM2EB1AL46 878 aaPredicted RBP15.79■□□□□ 0.12
MACF1-208ENST00000446276 EIF4A2Q14240 407 aaKnown RBP15.79■□□□□ 0.12
MACF1-208ENST00000446276 NUTM2AQ8IVF1 878 aaPredicted RBP15.79■□□□□ 0.12
MACF1-208ENST00000446276 COL18A1P39060 1754 aa15.78■□□□□ 0.12
MACF1-208ENST00000446276 NUDCQ9Y266 331 aa15.78■□□□□ 0.12
MACF1-208ENST00000446276 ADAMTS2O95450 1211 aa15.77■□□□□ 0.12
MACF1-208ENST00000446276 WDR43Q15061 677 aaKnown RBP eCLIP15.76■□□□□ 0.11
MACF1-208ENST00000446276 ERBB3P21860 1342 aa15.76■□□□□ 0.11
MACF1-208ENST00000446276 LMO7Q8WWI1 1683 aa15.75■□□□□ 0.11
MACF1-208ENST00000446276 CAMTA1Q9Y6Y1 1673 aa15.75■□□□□ 0.11
MACF1-208ENST00000446276 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
MACF1-208ENST00000446276 ANKRD24Q8TF21 1146 aa15.75■□□□□ 0.11
MACF1-208ENST00000446276 LRP6O75581 1613 aa15.74■□□□□ 0.11
MACF1-208ENST00000446276 LTV1Q96GA3 475 aaPredicted RBP15.74■□□□□ 0.11
MACF1-208ENST00000446276 ADAMTS8Q9UP79 889 aa15.74■□□□□ 0.11
MACF1-208ENST00000446276 COL14A1Q05707 1796 aaKnown RBP15.74■□□□□ 0.11
MACF1-208ENST00000446276 U2SURPO15042 1029 aaKnown RBP15.74■□□□□ 0.11
MACF1-208ENST00000446276 U2AF1L5P0DN76 240 aaPredicted RBP15.73■□□□□ 0.11
MACF1-208ENST00000446276 U2AF1Q01081 240 aaKnown RBP eCLIP15.73■□□□□ 0.11
MACF1-208ENST00000446276 EYA1Q99502 592 aa15.73■□□□□ 0.11
MACF1-208ENST00000446276 BTG4Q9NY30 223 aa15.73■□□□□ 0.11
MACF1-208ENST00000446276 IGSF1Q8N6C5 1336 aa15.72■□□□□ 0.11
MACF1-208ENST00000446276 COL5A2P05997 1499 aaPredicted RBP15.72■□□□□ 0.11
MACF1-208ENST00000446276 RGPD5Q99666 1765 aa15.71■□□□□ 0.11
MACF1-208ENST00000446276 WDR17Q8IZU2 1322 aa15.71■□□□□ 0.11
MACF1-208ENST00000446276 SLIT2O94813 1529 aa15.71■□□□□ 0.1
MACF1-208ENST00000446276 NBPF6Q5VWK0 638 aa15.71■□□□□ 0.1
MACF1-208ENST00000446276 NBPF4Q96M43 638 aa15.71■□□□□ 0.1
MACF1-208ENST00000446276 RGPD1P0DJD0 1748 aa15.7■□□□□ 0.1
MACF1-208ENST00000446276 FCHSD2O94868 740 aa15.7■□□□□ 0.1
MACF1-208ENST00000446276 FNBP4Q8N3X1 1017 aaPredicted RBP15.7■□□□□ 0.1
MACF1-208ENST00000446276 NGLY1Q96IV0 654 aa15.7■□□□□ 0.1
MACF1-208ENST00000446276 C8orf37Q96NL8 207 aa15.7■□□□□ 0.1
MACF1-208ENST00000446276 KDRP35968 1356 aa15.69■□□□□ 0.1
MACF1-208ENST00000446276 CSB-PGBD3P0DP91 1061 aa15.69■□□□□ 0.1
MACF1-208ENST00000446276 EVA1CP58658 441 aa15.69■□□□□ 0.1
MACF1-208ENST00000446276 NCAPD2Q15021 1401 aa15.69■□□□□ 0.1
MACF1-208ENST00000446276 SULT6B1Q6IMI4 303 aa15.69■□□□□ 0.1
MACF1-208ENST00000446276 HMOX1P09601 288 aa15.68■□□□□ 0.1
MACF1-208ENST00000446276 RSPH6AQ9H0K4 717 aa15.68■□□□□ 0.1
MACF1-208ENST00000446276 STRN4Q9NRL3 753 aa15.68■□□□□ 0.1
MACF1-208ENST00000446276 MEX3CQ5U5Q3 659 aaKnown RBP15.68■□□□□ 0.1
MACF1-208ENST00000446276 NLRP2Q9NX02 1062 aa15.68■□□□□ 0.1
MACF1-208ENST00000446276 LARP1Q6PKG0 1096 aaKnown RBP15.67■□□□□ 0.1
MACF1-208ENST00000446276 AEBP1Q8IUX7 1158 aa15.67■□□□□ 0.1
MACF1-208ENST00000446276 PNNQ9H307 717 aaKnown RBP15.67■□□□□ 0.1
MACF1-208ENST00000446276 PLCH1Q4KWH8 1693 aa15.67■□□□□ 0.1
MACF1-208ENST00000446276 NWD2Q9ULI1 1742 aa15.66■□□□□ 0.1
MACF1-208ENST00000446276 TOM1L2Q6ZVM7 507 aa15.66■□□□□ 0.1
MACF1-208ENST00000446276 UNC5CLQ8IV45 518 aa15.66■□□□□ 0.1
MACF1-208ENST00000446276 PLEKHF1Q96S99 279 aa15.66■□□□□ 0.1
MACF1-208ENST00000446276 CARD10Q9BWT7 1032 aa15.66■□□□□ 0.1
MACF1-208ENST00000446276 FAM208AQ9UK61 1670 aaKnown RBP15.66■□□□□ 0.1
MACF1-208ENST00000446276 BCL9LQ86UU0 1499 aa15.66■□□□□ 0.1
MACF1-208ENST00000446276 USHBP1Q8N6Y0 703 aa15.66■□□□□ 0.1
MACF1-208ENST00000446276 CRB1P82279 1406 aa15.65■□□□□ 0.1
MACF1-208ENST00000446276 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
MACF1-208ENST00000446276 RUNDC1Q96C34 613 aa15.65■□□□□ 0.1
MACF1-208ENST00000446276 NRAPQ86VF7 1730 aa15.64■□□□□ 0.09
MACF1-208ENST00000446276 CCDC146Q8IYE0 955 aa15.64■□□□□ 0.09
MACF1-208ENST00000446276 RGPD2P0DJD1 1756 aa15.64■□□□□ 0.09
MACF1-208ENST00000446276 USP21Q9UK80 565 aa15.63■□□□□ 0.09
MACF1-208ENST00000446276 AFF2P51816 1311 aa15.62■□□□□ 0.09
MACF1-208ENST00000446276 VPS72Q15906 364 aa15.62■□□□□ 0.09
MACF1-208ENST00000446276 PHACTR3Q96KR7 559 aa15.61■□□□□ 0.09
MACF1-208ENST00000446276 NEFMP07197 916 aa15.61■□□□□ 0.09
MACF1-208ENST00000446276 PLEKHG2Q9H7P9 1386 aa15.61■□□□□ 0.09
MACF1-208ENST00000446276 SPATA31A1Q5TZJ5 1347 aa15.6■□□□□ 0.09
MACF1-208ENST00000446276 SPATA31A5Q5VU36 1347 aa15.6■□□□□ 0.09
MACF1-208ENST00000446276 SPATA31A7Q8IWB4 1347 aa15.6■□□□□ 0.09
MACF1-208ENST00000446276 MAPK8IP3Q9UPT6 1336 aa15.6■□□□□ 0.09
MACF1-208ENST00000446276 RAPGEF4Q8WZA2 1011 aa15.6■□□□□ 0.09
MACF1-208ENST00000446276 APAF1O14727 1248 aa15.6■□□□□ 0.09
MACF1-208ENST00000446276 TCP11L2Q8N4U5 519 aa15.6■□□□□ 0.09
MACF1-208ENST00000446276 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.59■□□□□ 0.09
MACF1-208ENST00000446276 ILDR1Q86SU0 546 aaPredicted RBP15.59■□□□□ 0.09
MACF1-208ENST00000446276 USP35Q9P2H5 1018 aa15.59■□□□□ 0.09
MACF1-208ENST00000446276 THRAP3Q9Y2W1 955 aaKnown RBP15.59■□□□□ 0.09
MACF1-208ENST00000446276 TATP17735 454 aaPredicted RBP15.58■□□□□ 0.09
MACF1-208ENST00000446276 IL2RBP14784 551 aa15.58■□□□□ 0.08
MACF1-208ENST00000446276 HNRNPUQ00839 825 aaKnown RBP eCLIP15.58■□□□□ 0.08
MACF1-208ENST00000446276 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms