RNA–Protein interactions for RNA: ENST00000446103.5

PBRM1-215, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-215ENST00000446103 CDCA7Q9BWT1 371 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-215ENST00000446103 METRNQ9UJH8 293 aa8.48□□□□□ -1.05
PBRM1-215ENST00000446103 BRPF3Q9ULD4 1205 aa8.48□□□□□ -1.05
PBRM1-215ENST00000446103 STAU1O95793 577 aaKnown RBP8.48□□□□□ -1.05
PBRM1-215ENST00000446103 LARP1Q6PKG0 1096 aaKnown RBP8.48□□□□□ -1.05
PBRM1-215ENST00000446103 LYPD8Q6UX82 237 aa8.48□□□□□ -1.05
PBRM1-215ENST00000446103 GLYCTKQ8IVS8 523 aa8.48□□□□□ -1.05
PBRM1-215ENST00000446103 NAA30Q147X3 362 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-215ENST00000446103 GPATCH3Q96I76 525 aa8.48□□□□□ -1.05
PBRM1-215ENST00000446103 POTEIP0CG38 1075 aa8.47□□□□□ -1.05
PBRM1-215ENST00000446103 POTEJP0CG39 1038 aa8.47□□□□□ -1.05
PBRM1-215ENST00000446103 PSEN2P49810 448 aa8.47□□□□□ -1.05
PBRM1-215ENST00000446103 ZNF326Q5BKZ1 582 aaKnown RBP8.47□□□□□ -1.05
PBRM1-215ENST00000446103 RNF135Q8IUD6 432 aa8.47□□□□□ -1.05
PBRM1-215ENST00000446103 KCNK17Q96T54 332 aa8.47□□□□□ -1.05
PBRM1-215ENST00000446103 TINF2Q9BSI4 451 aa8.47□□□□□ -1.05
PBRM1-215ENST00000446103 LNPKQ9C0E8 428 aa8.47□□□□□ -1.05
PBRM1-215ENST00000446103 PIF1Q9H611 641 aa8.47□□□□□ -1.05
PBRM1-215ENST00000446103 NT5DC4Q86YG4 428 aa8.46□□□□□ -1.05
PBRM1-215ENST00000446103 WWC3Q9ULE0 1092 aa8.46□□□□□ -1.05
PBRM1-215ENST00000446103 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
PBRM1-215ENST00000446103 RETREG3Q86VR2 466 aa8.46□□□□□ -1.06
PBRM1-215ENST00000446103 POTEEQ6S8J3 1075 aa8.46□□□□□ -1.06
PBRM1-215ENST00000446103 TMC7Q7Z402 723 aa8.46□□□□□ -1.06
PBRM1-215ENST00000446103 IQSEC3Q9UPP2 1182 aaPredicted RBP8.46□□□□□ -1.06
PBRM1-215ENST00000446103 SAMD7Q7Z3H4 446 aa8.45□□□□□ -1.06
PBRM1-215ENST00000446103 PACS2Q86VP3 889 aa8.45□□□□□ -1.06
PBRM1-215ENST00000446103 TSEN2Q8NCE0 465 aaKnown RBP8.45□□□□□ -1.06
PBRM1-215ENST00000446103 CHIC2Q9UKJ5 165 aa8.45□□□□□ -1.06
PBRM1-215ENST00000446103 C21orf2O43822 256 aa8.45□□□□□ -1.06
PBRM1-215ENST00000446103 PTPREP23469 700 aa8.45□□□□□ -1.06
PBRM1-215ENST00000446103 ATP5J2-PTCD1G3V325 749 aa8.44□□□□□ -1.06
PBRM1-215ENST00000446103 RNF40O75150 1001 aa8.44□□□□□ -1.06
PBRM1-215ENST00000446103 MORN1Q5T089 497 aa8.44□□□□□ -1.06
PBRM1-215ENST00000446103 NLGN1Q8N2Q7 840 aa8.44□□□□□ -1.06
PBRM1-215ENST00000446103 DNAAF2Q9NVR5 837 aaKnown RBP8.44□□□□□ -1.06
PBRM1-215ENST00000446103 ANKRD62A6NC57 917 aa8.43□□□□□ -1.06
PBRM1-215ENST00000446103 HAX1O00165 279 aa8.43□□□□□ -1.06
PBRM1-215ENST00000446103 TPCN2Q8NHX9 752 aa8.43□□□□□ -1.06
PBRM1-215ENST00000446103 C1orf216Q8TAB5 229 aa8.43□□□□□ -1.06
PBRM1-215ENST00000446103 ACBD3Q9H3P7 528 aa8.43□□□□□ -1.06
PBRM1-215ENST00000446103 DCTN4Q9UJW0 460 aa8.43□□□□□ -1.06
PBRM1-215ENST00000446103 IGHA2P01877 340 aa8.43□□□□□ -1.06
PBRM1-215ENST00000446103 ATP6V1AP38606 617 aa8.43□□□□□ -1.06
PBRM1-215ENST00000446103 FAM26DQ5JW98 314 aa8.43□□□□□ -1.06
PBRM1-215ENST00000446103 ZBED2Q9BTP6 218 aa8.42□□□□□ -1.06
PBRM1-215ENST00000446103 POLR3GLQ9BT43 218 aa8.42□□□□□ -1.06
PBRM1-215ENST00000446103 HIRIP3Q9BW71 556 aaPredicted RBP8.42□□□□□ -1.06
PBRM1-215ENST00000446103 PCDHB9Q9Y5E1 797 aa8.42□□□□□ -1.06
PBRM1-215ENST00000446103 SIX5Q8N196 739 aa8.41□□□□□ -1.06
PBRM1-215ENST00000446103 FANCCQ00597 558 aa8.41□□□□□ -1.06
PBRM1-215ENST00000446103 OXLD1Q5BKU9 147 aa8.41□□□□□ -1.06
PBRM1-215ENST00000446103 GABBR2O75899 941 aa8.41□□□□□ -1.06
PBRM1-215ENST00000446103 SAP130Q9H0E3 1048 aa8.41□□□□□ -1.06
PBRM1-215ENST00000446103 PRDM9Q9NQV7 894 aa8.41□□□□□ -1.06
PBRM1-215ENST00000446103 CCDC102BQ68D86 513 aa8.4□□□□□ -1.06
PBRM1-215ENST00000446103 ADAM32Q8TC27 787 aa8.4□□□□□ -1.06
PBRM1-215ENST00000446103 PCDHGA11Q9Y5H2 935 aa8.4□□□□□ -1.06
PBRM1-215ENST00000446103 EAPPQ56P03 285 aaPredicted RBP8.4□□□□□ -1.07
PBRM1-215ENST00000446103 TANGO6Q9C0B7 1094 aa8.4□□□□□ -1.07
PBRM1-215ENST00000446103 PPP4R3BQ5MIZ7 849 aa8.39□□□□□ -1.07
PBRM1-215ENST00000446103 RGL4Q8IZJ4 473 aa8.39□□□□□ -1.07
PBRM1-215ENST00000446103 GTF2IP78347 998 aa8.39□□□□□ -1.07
PBRM1-215ENST00000446103 DESI1Q6ICB0 168 aa8.39□□□□□ -1.07
PBRM1-215ENST00000446103 PNMA1Q8ND90 353 aa8.39□□□□□ -1.07
PBRM1-215ENST00000446103 EGFL7Q9UHF1 273 aa8.39□□□□□ -1.07
PBRM1-215ENST00000446103 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.39□□□□□ -1.07
PBRM1-215ENST00000446103 AXIN2Q9Y2T1 843 aa8.39□□□□□ -1.07
PBRM1-215ENST00000446103 ZC3H4Q9UPT8 1303 aaKnown RBP8.39□□□□□ -1.07
PBRM1-215ENST00000446103 PCDHGB7Q9Y5F8 929 aa8.39□□□□□ -1.07
PBRM1-215ENST00000446103 FMNL1O95466 1100 aaPredicted RBP8.38□□□□□ -1.07
PBRM1-215ENST00000446103 CCDC144BQ3MJ40 725 aa8.38□□□□□ -1.07
PBRM1-215ENST00000446103 CCDC87Q9NVE4 849 aa8.38□□□□□ -1.07
PBRM1-215ENST00000446103 MYO15BQ96JP2 1530 aa8.38□□□□□ -1.07
PBRM1-215ENST00000446103 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.38□□□□□ -1.07
PBRM1-215ENST00000446103 EML3Q32P44 896 aa8.37□□□□□ -1.07
PBRM1-215ENST00000446103 PRKAG2Q9UGJ0 569 aa8.37□□□□□ -1.07
PBRM1-215ENST00000446103 PARP2Q9UGN5 583 aa8.37□□□□□ -1.07
PBRM1-215ENST00000446103 SBNO2Q9Y2G9 1366 aa8.37□□□□□ -1.07
PBRM1-215ENST00000446103 GPR182O15218 404 aa8.37□□□□□ -1.07
PBRM1-215ENST00000446103 MPSTP25325 297 aa8.37□□□□□ -1.07
PBRM1-215ENST00000446103 ZNF394Q53GI3 561 aa8.36□□□□□ -1.07
PBRM1-215ENST00000446103 DUSP9Q99956 384 aaKnown RBP8.36□□□□□ -1.07
PBRM1-215ENST00000446103 SCAMP3O14828 347 aaKnown RBP8.36□□□□□ -1.07
PBRM1-215ENST00000446103 WEE1P30291 646 aa8.36□□□□□ -1.07
PBRM1-215ENST00000446103 GTF2F1P35269 517 aaKnown RBP eCLIP8.36□□□□□ -1.07
PBRM1-215ENST00000446103 FKBP4Q02790 459 aaKnown RBP eCLIP8.36□□□□□ -1.07
PBRM1-215ENST00000446103 TMEM87AQ8NBN3 555 aa8.36□□□□□ -1.07
PBRM1-215ENST00000446103 RB1CC1Q8TDY2 1594 aa8.35□□□□□ -1.07
PBRM1-215ENST00000446103 GIGYF1O75420 1035 aaPredicted RBP8.35□□□□□ -1.07
PBRM1-215ENST00000446103 SEC13P55735 322 aa8.35□□□□□ -1.07
PBRM1-215ENST00000446103 DMRTA1Q5VZB9 504 aa8.35□□□□□ -1.07
PBRM1-215ENST00000446103 VTI1AQ96AJ9 217 aa8.35□□□□□ -1.07
PBRM1-215ENST00000446103 HINFPQ9BQA5 517 aa8.35□□□□□ -1.07
PBRM1-215ENST00000446103 CTHP32929 405 aa8.35□□□□□ -1.07
PBRM1-215ENST00000446103 RAB11FIP3O75154 756 aa8.35□□□□□ -1.07
PBRM1-215ENST00000446103 LARGE2Q8N3Y3 721 aa8.35□□□□□ -1.07
PBRM1-215ENST00000446103 CARD14Q9BXL6 1004 aa8.35□□□□□ -1.07
PBRM1-215ENST00000446103 TREHO43280 583 aa8.34□□□□□ -1.07
PBRM1-215ENST00000446103 SF3A1Q15459 793 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms