RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 AATKQ6ZMQ8 1374 aa13.4□□□□□ -0.26
LINC00642-203ENST00000444942 QSER1Q2KHR3 1735 aa13.39□□□□□ -0.27
LINC00642-203ENST00000444942 NEUROD1Q13562 356 aa13.39□□□□□ -0.27
LINC00642-203ENST00000444942 JMYQ8N9B5 988 aa13.39□□□□□ -0.27
LINC00642-203ENST00000444942 SIRT1Q96EB6 747 aa13.39□□□□□ -0.27
LINC00642-203ENST00000444942 WNK3Q9BYP7 1800 aa13.38□□□□□ -0.27
LINC00642-203ENST00000444942 YTHDC2Q9H6S0 1430 aaKnown RBP13.38□□□□□ -0.27
LINC00642-203ENST00000444942 KIF3CO14782 793 aa13.38□□□□□ -0.27
LINC00642-203ENST00000444942 SIN3AQ96ST3 1273 aa13.38□□□□□ -0.27
LINC00642-203ENST00000444942 BCL9O00512 1426 aa13.37□□□□□ -0.27
LINC00642-203ENST00000444942 ZC3H6P61129 1189 aaKnown RBP13.37□□□□□ -0.27
LINC00642-203ENST00000444942 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
LINC00642-203ENST00000444942 DCAF11Q8TEB1 546 aa13.36□□□□□ -0.27
LINC00642-203ENST00000444942 ARHGEF28Q8N1W1 1705 aaKnown RBP13.36□□□□□ -0.27
LINC00642-203ENST00000444942 POLD1P28340 1107 aa13.35□□□□□ -0.27
LINC00642-203ENST00000444942 CCER1Q8TC90 406 aaPredicted RBP13.35□□□□□ -0.27
LINC00642-203ENST00000444942 KLRG1Q96E93 195 aa13.35□□□□□ -0.27
LINC00642-203ENST00000444942 PAK3O75914 559 aaPredicted RBP13.34□□□□□ -0.27
LINC00642-203ENST00000444942 DDB1Q16531 1140 aa13.33□□□□□ -0.27
LINC00642-203ENST00000444942 SLC16A10Q8TF71 515 aa13.33□□□□□ -0.27
LINC00642-203ENST00000444942 WWC3Q9ULE0 1092 aa13.33□□□□□ -0.27
LINC00642-203ENST00000444942 COL5A2P05997 1499 aaPredicted RBP13.32□□□□□ -0.28
LINC00642-203ENST00000444942 TUBGCP6Q96RT7 1819 aa13.32□□□□□ -0.28
LINC00642-203ENST00000444942 PIK3C2GO75747 1445 aa13.32□□□□□ -0.28
LINC00642-203ENST00000444942 CRB1P82279 1406 aa13.32□□□□□ -0.28
LINC00642-203ENST00000444942 CFAP70Q5T0N1 1121 aa13.32□□□□□ -0.28
LINC00642-203ENST00000444942 MARCH10Q8NA82 808 aaPredicted RBP13.32□□□□□ -0.28
LINC00642-203ENST00000444942 NHSQ6T4R5 1651 aa13.31□□□□□ -0.28
LINC00642-203ENST00000444942 CPDO75976 1380 aa13.3□□□□□ -0.28
LINC00642-203ENST00000444942 TOMM70O94826 608 aa13.3□□□□□ -0.28
LINC00642-203ENST00000444942 ZNF827Q17R98 1081 aa13.3□□□□□ -0.28
LINC00642-203ENST00000444942 ITSN1Q15811 1721 aa13.29□□□□□ -0.28
LINC00642-203ENST00000444942 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
LINC00642-203ENST00000444942 PRR36Q9H6K5 1346 aa13.29□□□□□ -0.28
LINC00642-203ENST00000444942 SAFB2Q14151 953 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC00642-203ENST00000444942 NGDNQ8NEJ9 315 aaKnown RBP13.28□□□□□ -0.28
LINC00642-203ENST00000444942 BTAF1O14981 1849 aa13.27□□□□□ -0.28
LINC00642-203ENST00000444942 PRAM1Q96QH2 718 aa13.27□□□□□ -0.29
LINC00642-203ENST00000444942 EIF3AQ14152 1382 aaKnown RBP13.27□□□□□ -0.29
LINC00642-203ENST00000444942 HTRA3P83110 453 aa13.26□□□□□ -0.29
LINC00642-203ENST00000444942 L3MBTL2Q969R5 705 aa13.26□□□□□ -0.29
LINC00642-203ENST00000444942 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
LINC00642-203ENST00000444942 NUTM2GQ5VZR2 741 aa13.25□□□□□ -0.29
LINC00642-203ENST00000444942 PNPLA7Q6ZV29 1317 aa13.24□□□□□ -0.29
LINC00642-203ENST00000444942 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
LINC00642-203ENST00000444942 KAT6BQ8WYB5 2073 aa13.24□□□□□ -0.29
LINC00642-203ENST00000444942 TRAK1Q9UPV9 953 aa13.23□□□□□ -0.29
LINC00642-203ENST00000444942 CDCA7Q9BWT1 371 aaPredicted RBP13.22□□□□□ -0.29
LINC00642-203ENST00000444942 LRRC4BQ9NT99 713 aa13.22□□□□□ -0.29
LINC00642-203ENST00000444942 TONSLQ96HA7 1378 aa13.22□□□□□ -0.29
LINC00642-203ENST00000444942 TNS2Q63HR2 1409 aa13.21□□□□□ -0.3
LINC00642-203ENST00000444942 KIAA1210Q9ULL0 1709 aa13.21□□□□□ -0.3
LINC00642-203ENST00000444942 BRD4O60885 1362 aaPredicted RBP13.21□□□□□ -0.3
LINC00642-203ENST00000444942 USP19O94966 1318 aa13.21□□□□□ -0.3
LINC00642-203ENST00000444942 HSPA1AP0DMV8 641 aaKnown RBP13.2□□□□□ -0.3
LINC00642-203ENST00000444942 HSPA1BP0DMV9 641 aaKnown RBP13.2□□□□□ -0.3
LINC00642-203ENST00000444942 NBPF1Q3BBV0 1214 aa13.2□□□□□ -0.3
LINC00642-203ENST00000444942 POGKQ9P215 609 aa13.2□□□□□ -0.3
LINC00642-203ENST00000444942 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
LINC00642-203ENST00000444942 RBM46Q8TBY0 533 aaKnown RBP13.2□□□□□ -0.3
LINC00642-203ENST00000444942 STAC3Q96MF2 364 aa13.2□□□□□ -0.3
LINC00642-203ENST00000444942 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
LINC00642-203ENST00000444942 COL18A1P39060 1754 aa13.19□□□□□ -0.3
LINC00642-203ENST00000444942 TRPM1Q7Z4N2 1603 aa13.19□□□□□ -0.3
LINC00642-203ENST00000444942 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
LINC00642-203ENST00000444942 CD2APQ9Y5K6 639 aa13.19□□□□□ -0.3
LINC00642-203ENST00000444942 CICQ96RK0 1608 aaPredicted RBP13.18□□□□□ -0.3
LINC00642-203ENST00000444942 WASLO00401 505 aaPredicted RBP13.18□□□□□ -0.3
LINC00642-203ENST00000444942 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
LINC00642-203ENST00000444942 GCP02774 474 aa13.17□□□□□ -0.3
LINC00642-203ENST00000444942 MINK1Q8N4C8 1332 aaPredicted RBP13.16□□□□□ -0.3
LINC00642-203ENST00000444942 USP6P35125 1406 aa13.16□□□□□ -0.3
LINC00642-203ENST00000444942 EXOC5O00471 708 aa13.16□□□□□ -0.3
LINC00642-203ENST00000444942 FSTL1Q12841 308 aa13.16□□□□□ -0.3
LINC00642-203ENST00000444942 ABTB2Q8N961 1025 aa13.16□□□□□ -0.3
LINC00642-203ENST00000444942 ACSBG1Q96GR2 724 aa13.16□□□□□ -0.3
LINC00642-203ENST00000444942 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
LINC00642-203ENST00000444942 PIK3C2AO00443 1686 aa13.16□□□□□ -0.3
LINC00642-203ENST00000444942 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
LINC00642-203ENST00000444942 FAM161AQ3B820 660 aa13.15□□□□□ -0.3
LINC00642-203ENST00000444942 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.3
LINC00642-203ENST00000444942 POLR3AO14802 1390 aaPredicted RBP13.15□□□□□ -0.3
LINC00642-203ENST00000444942 ABCC6O95255 1503 aa13.14□□□□□ -0.31
LINC00642-203ENST00000444942 SLC27A3Q5K4L6 730 aa13.14□□□□□ -0.31
LINC00642-203ENST00000444942 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
LINC00642-203ENST00000444942 ROCK2O75116 1388 aaKnown RBP13.13□□□□□ -0.31
LINC00642-203ENST00000444942 LY75O60449 1722 aa13.12□□□□□ -0.31
LINC00642-203ENST00000444942 CLSPNQ9HAW4 1339 aa13.12□□□□□ -0.31
LINC00642-203ENST00000444942 QRICH2Q9H0J4 1663 aa13.11□□□□□ -0.31
LINC00642-203ENST00000444942 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
LINC00642-203ENST00000444942 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
LINC00642-203ENST00000444942 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
LINC00642-203ENST00000444942 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
LINC00642-203ENST00000444942 ACEP12821 1306 aa13.1□□□□□ -0.31
LINC00642-203ENST00000444942 IGSF1Q8N6C5 1336 aa13.1□□□□□ -0.31
LINC00642-203ENST00000444942 SLIT3O75094 1523 aa13.09□□□□□ -0.31
LINC00642-203ENST00000444942 MSL1Q68DK7 614 aa13.08□□□□□ -0.31
LINC00642-203ENST00000444942 COL23A1Q86Y22 540 aaPredicted RBP13.08□□□□□ -0.31
LINC00642-203ENST00000444942 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.31
LINC00642-203ENST00000444942 CARD11Q9BXL7 1154 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms