RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 VPS72Q15906 364 aa23.56■■□□□ 1.36
AP1S3-207ENST00000444408 CCDC9Q9Y3X0 531 aaKnown RBP23.56■■□□□ 1.36
AP1S3-207ENST00000444408 KNSTRNQ9Y448 316 aa23.56■■□□□ 1.36
AP1S3-207ENST00000444408 RRS1Q15050 365 aaKnown RBP23.55■■□□□ 1.36
AP1S3-207ENST00000444408 GJD4Q96KN9 370 aaPredicted RBP23.55■■□□□ 1.36
AP1S3-207ENST00000444408 MAP3K19Q56UN5 1328 aa23.55■■□□□ 1.36
AP1S3-207ENST00000444408 SRCAPQ6ZRS2 3230 aa23.54■■□□□ 1.36
AP1S3-207ENST00000444408 GLI3P10071 1580 aa23.54■■□□□ 1.36
AP1S3-207ENST00000444408 AMER1Q5JTC6 1135 aaPredicted RBP23.54■■□□□ 1.36
AP1S3-207ENST00000444408 LARP1Q6PKG0 1096 aaKnown RBP23.54■■□□□ 1.36
AP1S3-207ENST00000444408 TNNT2P45379 298 aaPredicted RBP23.53■■□□□ 1.36
AP1S3-207ENST00000444408 COL5A2P05997 1499 aaPredicted RBP23.53■■□□□ 1.36
AP1S3-207ENST00000444408 EVA1CP58658 441 aa23.52■■□□□ 1.36
AP1S3-207ENST00000444408 CNGB1Q14028 1251 aaPredicted RBP23.52■■□□□ 1.36
AP1S3-207ENST00000444408 LTN1O94822 1766 aa23.52■■□□□ 1.36
AP1S3-207ENST00000444408 CCDC125Q86Z20 511 aa23.51■■□□□ 1.35
AP1S3-207ENST00000444408 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
AP1S3-207ENST00000444408 SPATA31A5Q5VU36 1347 aa23.5■■□□□ 1.35
AP1S3-207ENST00000444408 SPATA31A7Q8IWB4 1347 aa23.5■■□□□ 1.35
AP1S3-207ENST00000444408 EMILIN1Q9Y6C2 1016 aa23.49■■□□□ 1.35
AP1S3-207ENST00000444408 CC2D1BQ5T0F9 858 aaKnown RBP23.48■■□□□ 1.35
AP1S3-207ENST00000444408 IP6K1Q92551 441 aa23.48■■□□□ 1.35
AP1S3-207ENST00000444408 USP35Q9P2H5 1018 aa23.48■■□□□ 1.35
AP1S3-207ENST00000444408 ANKRD26Q9UPS8 1709 aa23.47■■□□□ 1.35
AP1S3-207ENST00000444408 HOXC9P31274 260 aa23.47■■□□□ 1.35
AP1S3-207ENST00000444408 AMPHP49418 695 aa23.47■■□□□ 1.35
AP1S3-207ENST00000444408 MORC1Q86VD1 984 aa23.47■■□□□ 1.35
AP1S3-207ENST00000444408 SPATA31A1Q5TZJ5 1347 aa23.47■■□□□ 1.35
AP1S3-207ENST00000444408 NSD2O96028 1365 aa23.47■■□□□ 1.35
AP1S3-207ENST00000444408 FAM98CQ17RN3 349 aaKnown RBP23.46■■□□□ 1.35
AP1S3-207ENST00000444408 PEAK1Q9H792 1746 aa23.46■■□□□ 1.35
AP1S3-207ENST00000444408 EP400Q96L91 3159 aa23.46■■□□□ 1.35
AP1S3-207ENST00000444408 DDX10Q13206 875 aaKnown RBP23.45■■□□□ 1.34
AP1S3-207ENST00000444408 LTV1Q96GA3 475 aaPredicted RBP23.45■■□□□ 1.34
AP1S3-207ENST00000444408 ABCC6O95255 1503 aa23.44■■□□□ 1.34
AP1S3-207ENST00000444408 WDR17Q8IZU2 1322 aa23.44■■□□□ 1.34
AP1S3-207ENST00000444408 CSB-PGBD3P0DP91 1061 aa23.44■■□□□ 1.34
AP1S3-207ENST00000444408 ANKRD24Q8TF21 1146 aa23.44■■□□□ 1.34
AP1S3-207ENST00000444408 POLKQ9UBT6 870 aa23.44■■□□□ 1.34
AP1S3-207ENST00000444408 ERBB3P21860 1342 aa23.43■■□□□ 1.34
AP1S3-207ENST00000444408 PPM1GO15355 546 aaPredicted RBP23.43■■□□□ 1.34
AP1S3-207ENST00000444408 TOM1L2Q6ZVM7 507 aa23.43■■□□□ 1.34
AP1S3-207ENST00000444408 CRB1P82279 1406 aa23.42■■□□□ 1.34
AP1S3-207ENST00000444408 HSP90AB2PQ58FF8 381 aa23.42■■□□□ 1.34
AP1S3-207ENST00000444408 BLMP54132 1417 aaPredicted RBP23.41■■□□□ 1.34
AP1S3-207ENST00000444408 ONECUT3O60422 494 aaPredicted RBP23.4■■□□□ 1.34
AP1S3-207ENST00000444408 SEPT12Q8IYM1 358 aa23.4■■□□□ 1.34
AP1S3-207ENST00000444408 RTL1A6NKG5 1358 aa23.4■■□□□ 1.34
AP1S3-207ENST00000444408 A0A0G2JS52 829 aa23.38■■□□□ 1.33
AP1S3-207ENST00000444408 MYT1Q01538 1121 aa23.38■■□□□ 1.33
AP1S3-207ENST00000444408 TCP11L2Q8N4U5 519 aa23.38■■□□□ 1.33
AP1S3-207ENST00000444408 NLRP2Q9NX02 1062 aa23.38■■□□□ 1.33
AP1S3-207ENST00000444408 FLT4P35916 1363 aa23.38■■□□□ 1.33
AP1S3-207ENST00000444408 NPC1L1Q9UHC9 1359 aa23.38■■□□□ 1.33
AP1S3-207ENST00000444408 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
AP1S3-207ENST00000444408 CARD10Q9BWT7 1032 aa23.37■■□□□ 1.33
AP1S3-207ENST00000444408 MAP2P11137 1827 aaKnown RBP23.37■■□□□ 1.33
AP1S3-207ENST00000444408 INSRP06213 1382 aa23.36■■□□□ 1.33
AP1S3-207ENST00000444408 THSD7AQ9UPZ6 1657 aa23.35■■□□□ 1.33
AP1S3-207ENST00000444408 BARGINQ6ZT62 677 aa23.34■■□□□ 1.33
AP1S3-207ENST00000444408 KIF24Q5T7B8 1368 aa23.34■■□□□ 1.33
AP1S3-207ENST00000444408 SMG6Q86US8 1419 aaKnown RBP23.33■■□□□ 1.32
AP1S3-207ENST00000444408 BRWD3Q6RI45 1802 aa23.32■■□□□ 1.32
AP1S3-207ENST00000444408 NBPF6Q5VWK0 638 aa23.32■■□□□ 1.32
AP1S3-207ENST00000444408 USHBP1Q8N6Y0 703 aa23.32■■□□□ 1.32
AP1S3-207ENST00000444408 NBPF4Q96M43 638 aa23.32■■□□□ 1.32
AP1S3-207ENST00000444408 THRAP3Q9Y2W1 955 aaKnown RBP23.32■■□□□ 1.32
AP1S3-207ENST00000444408 RGPD2P0DJD1 1756 aa23.31■■□□□ 1.32
AP1S3-207ENST00000444408 MTHFSP49914 203 aa23.3■■□□□ 1.32
AP1S3-207ENST00000444408 FAM182BQ5T319 152 aa23.3■■□□□ 1.32
AP1S3-207ENST00000444408 DISP2A7MBM2 1401 aa23.29■■□□□ 1.32
AP1S3-207ENST00000444408 EIF4A2Q14240 407 aaKnown RBP23.29■■□□□ 1.32
AP1S3-207ENST00000444408 KRT27Q7Z3Y8 459 aa23.27■■□□□ 1.32
AP1S3-207ENST00000444408 FAM208AQ9UK61 1670 aaKnown RBP23.26■■□□□ 1.31
AP1S3-207ENST00000444408 SF3B2Q13435 895 aaKnown RBP23.26■■□□□ 1.31
AP1S3-207ENST00000444408 WNK3Q9BYP7 1800 aa23.25■■□□□ 1.31
AP1S3-207ENST00000444408 EYA1Q99502 592 aa23.25■■□□□ 1.31
AP1S3-207ENST00000444408 PPP2R1AP30153 589 aa23.24■■□□□ 1.31
AP1S3-207ENST00000444408 LRRC37A3O60309 1634 aa23.23■■□□□ 1.31
AP1S3-207ENST00000444408 PARP4Q9UKK3 1724 aaKnown RBP23.23■■□□□ 1.31
AP1S3-207ENST00000444408 DEFB132Q7Z7B7 95 aa23.23■■□□□ 1.31
AP1S3-207ENST00000444408 IL2RBP14784 551 aa23.22■■□□□ 1.31
AP1S3-207ENST00000444408 PARD3Q8TEW0 1356 aa23.22■■□□□ 1.31
AP1S3-207ENST00000444408 MEGF6O75095 1541 aa23.22■■□□□ 1.31
AP1S3-207ENST00000444408 DDB1Q16531 1140 aa23.21■■□□□ 1.31
AP1S3-207ENST00000444408 IL13P35225 146 aa23.2■■□□□ 1.3
AP1S3-207ENST00000444408 PDE3BQ13370 1112 aa23.2■■□□□ 1.3
AP1S3-207ENST00000444408 CDCA7Q9BWT1 371 aaPredicted RBP23.19■■□□□ 1.3
AP1S3-207ENST00000444408 NCAPD2Q15021 1401 aa23.18■■□□□ 1.3
AP1S3-207ENST00000444408 MARCH10Q8NA82 808 aaPredicted RBP23.18■■□□□ 1.3
AP1S3-207ENST00000444408 COL3A1P02461 1466 aaPredicted RBP23.17■■□□□ 1.3
AP1S3-207ENST00000444408 EXOC5O00471 708 aa23.17■■□□□ 1.3
AP1S3-207ENST00000444408 TNS2Q63HR2 1409 aa23.16■■□□□ 1.3
AP1S3-207ENST00000444408 IGSF1Q8N6C5 1336 aa23.16■■□□□ 1.3
AP1S3-207ENST00000444408 AEBP1Q8IUX7 1158 aa23.16■■□□□ 1.3
AP1S3-207ENST00000444408 RAPGEF4Q8WZA2 1011 aa23.14■■□□□ 1.29
AP1S3-207ENST00000444408 OVOS2A0A0G2JMS6 1433 aa23.14■■□□□ 1.29
AP1S3-207ENST00000444408 DIAPH1O60610 1272 aaKnown RBP23.13■■□□□ 1.29
AP1S3-207ENST00000444408 LRP5O75197 1615 aa23.12■■□□□ 1.29
AP1S3-207ENST00000444408 RGPD1P0DJD0 1748 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms