RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 OVOS2A0A0J9YW53 1432 aa29.38■■■□□ 2.29
CDKN3-204ENST00000442975 OVOS2Q6IE36 1432 aa29.38■■■□□ 2.29
CDKN3-204ENST00000442975 FAM182BQ5T319 152 aa29.38■■■□□ 2.29
CDKN3-204ENST00000442975 CCDC125Q86Z20 511 aa29.38■■■□□ 2.29
CDKN3-204ENST00000442975 BARGINQ6ZT62 677 aa29.37■■■□□ 2.29
CDKN3-204ENST00000442975 TOM1L2Q6ZVM7 507 aa29.37■■■□□ 2.29
CDKN3-204ENST00000442975 CSB-PGBD3P0DP91 1061 aa29.36■■■□□ 2.29
CDKN3-204ENST00000442975 SF3B2Q13435 895 aaKnown RBP29.36■■■□□ 2.29
CDKN3-204ENST00000442975 USP54Q70EL1 1684 aa29.35■■■□□ 2.29
CDKN3-204ENST00000442975 THRAP3Q9Y2W1 955 aaKnown RBP29.34■■■□□ 2.29
CDKN3-204ENST00000442975 WDR17Q8IZU2 1322 aa29.34■■■□□ 2.29
CDKN3-204ENST00000442975 EIF4G2P78344 907 aaKnown RBP eCLIP29.33■■■□□ 2.29
CDKN3-204ENST00000442975 POLR3GLQ9BT43 218 aa29.33■■■□□ 2.29
CDKN3-204ENST00000442975 COL18A1P39060 1754 aa29.33■■■□□ 2.29
CDKN3-204ENST00000442975 COG3Q96JB2 828 aa29.32■■■□□ 2.28
CDKN3-204ENST00000442975 ABCC6O95255 1503 aa29.3■■■□□ 2.28
CDKN3-204ENST00000442975 HSPA5P11021 654 aaKnown RBP29.3■■■□□ 2.28
CDKN3-204ENST00000442975 PDE3BQ13370 1112 aa29.3■■■□□ 2.28
CDKN3-204ENST00000442975 DEFB132Q7Z7B7 95 aa29.28■■■□□ 2.28
CDKN3-204ENST00000442975 GGNBP2Q9H3C7 697 aa29.25■■■□□ 2.27
CDKN3-204ENST00000442975 NSD3Q9BZ95 1437 aa29.24■■■□□ 2.27
CDKN3-204ENST00000442975 MYOM1P52179 1685 aa29.24■■■□□ 2.27
CDKN3-204ENST00000442975 ERBB3P21860 1342 aa29.23■■■□□ 2.27
CDKN3-204ENST00000442975 FAM196AQ6ZSG2 479 aa29.23■■■□□ 2.27
CDKN3-204ENST00000442975 CARD10Q9BWT7 1032 aa29.23■■■□□ 2.27
CDKN3-204ENST00000442975 FYB1O15117 783 aa29.21■■■□□ 2.27
CDKN3-204ENST00000442975 ANKRD24Q8TF21 1146 aa29.21■■■□□ 2.27
CDKN3-204ENST00000442975 BAG6P46379 1132 aa29.2■■■□□ 2.26
CDKN3-204ENST00000442975 NLRP2Q9NX02 1062 aa29.2■■■□□ 2.26
CDKN3-204ENST00000442975 LTN1O94822 1766 aa29.2■■■□□ 2.26
CDKN3-204ENST00000442975 PARP4Q9UKK3 1724 aaKnown RBP29.2■■■□□ 2.26
CDKN3-204ENST00000442975 MAP3K19Q56UN5 1328 aa29.2■■■□□ 2.26
CDKN3-204ENST00000442975 CCDC7Q96M83 1385 aa29.19■■■□□ 2.26
CDKN3-204ENST00000442975 DDB1Q16531 1140 aa29.19■■■□□ 2.26
CDKN3-204ENST00000442975 CARD14Q9BXL6 1004 aa29.19■■■□□ 2.26
CDKN3-204ENST00000442975 FBLN1P23142 703 aa29.18■■■□□ 2.26
CDKN3-204ENST00000442975 LRRC37A3O60309 1634 aa29.18■■■□□ 2.26
CDKN3-204ENST00000442975 RGPD5Q99666 1765 aa29.18■■■□□ 2.26
CDKN3-204ENST00000442975 TRIM37O94972 964 aa29.17■■■□□ 2.26
CDKN3-204ENST00000442975 LTV1Q96GA3 475 aaPredicted RBP29.17■■■□□ 2.26
CDKN3-204ENST00000442975 CDCA7Q9BWT1 371 aaPredicted RBP29.17■■■□□ 2.26
CDKN3-204ENST00000442975 AMPHP49418 695 aa29.16■■■□□ 2.26
CDKN3-204ENST00000442975 IP6K1Q92551 441 aa29.16■■■□□ 2.26
CDKN3-204ENST00000442975 RGPD1P0DJD0 1748 aa29.15■■■□□ 2.26
CDKN3-204ENST00000442975 DISP2A7MBM2 1401 aa29.15■■■□□ 2.26
CDKN3-204ENST00000442975 OVOS2A0A0G2JMS6 1433 aa29.14■■■□□ 2.26
CDKN3-204ENST00000442975 RRS1Q15050 365 aaKnown RBP29.14■■■□□ 2.26
CDKN3-204ENST00000442975 HOXC9P31274 260 aa29.12■■■□□ 2.25
CDKN3-204ENST00000442975 EN1Q05925 392 aaPredicted RBP29.12■■■□□ 2.25
CDKN3-204ENST00000442975 WNK3Q9BYP7 1800 aa29.11■■■□□ 2.25
CDKN3-204ENST00000442975 RTL1A6NKG5 1358 aa29.11■■■□□ 2.25
CDKN3-204ENST00000442975 KIF20BQ96Q89 1820 aa29.1■■■□□ 2.25
CDKN3-204ENST00000442975 TNS1Q9HBL0 1735 aaKnown RBP29.09■■■□□ 2.25
CDKN3-204ENST00000442975 CGNL1Q0VF96 1302 aa29.09■■■□□ 2.25
CDKN3-204ENST00000442975 TNS2Q63HR2 1409 aa29.09■■■□□ 2.25
CDKN3-204ENST00000442975 APBA3O96018 575 aa29.08■■■□□ 2.25
CDKN3-204ENST00000442975 EXOC5O00471 708 aa29.06■■■□□ 2.24
CDKN3-204ENST00000442975 IL2RBP14784 551 aa29.06■■■□□ 2.24
CDKN3-204ENST00000442975 MARCH10Q8NA82 808 aaPredicted RBP29.06■■■□□ 2.24
CDKN3-204ENST00000442975 C11orf95C9JLR9 678 aaPredicted RBP29.05■■■□□ 2.24
CDKN3-204ENST00000442975 SMG6Q86US8 1419 aaKnown RBP29.03■■■□□ 2.24
CDKN3-204ENST00000442975 EZH2Q15910 746 aaKnown RBP29.03■■■□□ 2.24
CDKN3-204ENST00000442975 PEAK1Q9H792 1746 aa29.03■■■□□ 2.24
CDKN3-204ENST00000442975 PANK3Q9H999 370 aa29.02■■■□□ 2.24
CDKN3-204ENST00000442975 FLT4P35916 1363 aa29.01■■■□□ 2.24
CDKN3-204ENST00000442975 FAM208AQ9UK61 1670 aaKnown RBP28.99■■■□□ 2.23
CDKN3-204ENST00000442975 EMILIN1Q9Y6C2 1016 aa28.99■■■□□ 2.23
CDKN3-204ENST00000442975 PPM1GO15355 546 aaPredicted RBP28.98■■■□□ 2.23
CDKN3-204ENST00000442975 CAMKK2Q96RR4 588 aa28.98■■■□□ 2.23
CDKN3-204ENST00000442975 PARD3Q8TEW0 1356 aa28.98■■■□□ 2.23
CDKN3-204ENST00000442975 KIF7Q2M1P5 1343 aa28.97■■■□□ 2.23
CDKN3-204ENST00000442975 HSP90AB2PQ58FF8 381 aa28.97■■■□□ 2.23
CDKN3-204ENST00000442975 INSRP06213 1382 aa28.97■■■□□ 2.23
CDKN3-204ENST00000442975 TNNT2P45379 298 aaPredicted RBP28.96■■■□□ 2.23
CDKN3-204ENST00000442975 KIF24Q5T7B8 1368 aa28.96■■■□□ 2.23
CDKN3-204ENST00000442975 BCL9O00512 1426 aa28.95■■■□□ 2.23
CDKN3-204ENST00000442975 SRCAPQ6ZRS2 3230 aa28.95■■■□□ 2.23
CDKN3-204ENST00000442975 PSDA5PKW4 1024 aaPredicted RBP28.95■■■□□ 2.22
CDKN3-204ENST00000442975 USHBP1Q8N6Y0 703 aa28.95■■■□□ 2.22
CDKN3-204ENST00000442975 PTF1AQ7RTS3 328 aa28.94■■■□□ 2.22
CDKN3-204ENST00000442975 BCL11BQ9C0K0 894 aaPredicted RBP28.93■■■□□ 2.22
CDKN3-204ENST00000442975 NBPF6Q5VWK0 638 aa28.92■■■□□ 2.22
CDKN3-204ENST00000442975 NBPF4Q96M43 638 aa28.92■■■□□ 2.22
CDKN3-204ENST00000442975 MEGF6O75095 1541 aa28.91■■■□□ 2.22
CDKN3-204ENST00000442975 DDX54Q8TDD1 881 aaKnown RBP28.9■■■□□ 2.22
CDKN3-204ENST00000442975 ACSBG1Q96GR2 724 aa28.9■■■□□ 2.22
CDKN3-204ENST00000442975 NSD2O96028 1365 aa28.89■■■□□ 2.22
CDKN3-204ENST00000442975 R3HDM1Q15032 1099 aaKnown RBP28.88■■■□□ 2.21
CDKN3-204ENST00000442975 KNSTRNQ9Y448 316 aa28.88■■■□□ 2.21
CDKN3-204ENST00000442975 RAPGEF4Q8WZA2 1011 aa28.87■■■□□ 2.21
CDKN3-204ENST00000442975 POLKQ9UBT6 870 aa28.86■■■□□ 2.21
CDKN3-204ENST00000442975 KCNQ2O43526 872 aa28.85■■■□□ 2.21
CDKN3-204ENST00000442975 ANKRD26Q9UPS8 1709 aa28.84■■■□□ 2.21
CDKN3-204ENST00000442975 MORC1Q86VD1 984 aa28.84■■■□□ 2.21
CDKN3-204ENST00000442975 RREB1Q92766 1687 aa28.83■■■□□ 2.21
CDKN3-204ENST00000442975 RGPD2P0DJD1 1756 aa28.83■■■□□ 2.21
CDKN3-204ENST00000442975 ZCRB1Q8TBF4 217 aaKnown RBP28.83■■■□□ 2.21
CDKN3-204ENST00000442975 WASHC2AQ641Q2 1341 aa28.83■■■□□ 2.21
CDKN3-204ENST00000442975 SBF2Q86WG5 1849 aa28.83■■■□□ 2.21
CDKN3-204ENST00000442975 TATP17735 454 aaPredicted RBP28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms