RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 BLMP54132 1417 aaPredicted RBP30.98■■■□□ 2.55
HDLBP-220ENST00000442730 CRB1P82279 1406 aa30.98■■■□□ 2.55
HDLBP-220ENST00000442730 BARGINQ6ZT62 677 aa30.97■■■□□ 2.55
HDLBP-220ENST00000442730 CCDC125Q86Z20 511 aa30.97■■■□□ 2.55
HDLBP-220ENST00000442730 CDCA8Q53HL2 280 aa30.96■■■□□ 2.55
HDLBP-220ENST00000442730 AXIN2Q9Y2T1 843 aa30.96■■■□□ 2.55
HDLBP-220ENST00000442730 MYOM1P52179 1685 aa30.95■■■□□ 2.55
HDLBP-220ENST00000442730 TCP11L2Q8N4U5 519 aa30.95■■■□□ 2.55
HDLBP-220ENST00000442730 THRAP3Q9Y2W1 955 aaKnown RBP30.91■■■□□ 2.54
HDLBP-220ENST00000442730 WDR17Q8IZU2 1322 aa30.91■■■□□ 2.54
HDLBP-220ENST00000442730 RGPD5Q99666 1765 aa30.9■■■□□ 2.54
HDLBP-220ENST00000442730 LTN1O94822 1766 aa30.89■■■□□ 2.54
HDLBP-220ENST00000442730 PARP4Q9UKK3 1724 aaKnown RBP30.89■■■□□ 2.54
HDLBP-220ENST00000442730 FAM182BQ5T319 152 aa30.87■■■□□ 2.53
HDLBP-220ENST00000442730 TOM1L2Q6ZVM7 507 aa30.87■■■□□ 2.53
HDLBP-220ENST00000442730 WNK3Q9BYP7 1800 aa30.85■■■□□ 2.53
HDLBP-220ENST00000442730 EIF4G2P78344 907 aaKnown RBP eCLIP30.85■■■□□ 2.53
HDLBP-220ENST00000442730 LRRC37A3O60309 1634 aa30.84■■■□□ 2.53
HDLBP-220ENST00000442730 HSPA5P11021 654 aaKnown RBP30.83■■■□□ 2.53
HDLBP-220ENST00000442730 RGPD1P0DJD0 1748 aa30.82■■■□□ 2.52
HDLBP-220ENST00000442730 COG3Q96JB2 828 aa30.82■■■□□ 2.52
HDLBP-220ENST00000442730 CSB-PGBD3P0DP91 1061 aa30.81■■■□□ 2.52
HDLBP-220ENST00000442730 SF3B2Q13435 895 aaKnown RBP30.8■■■□□ 2.52
HDLBP-220ENST00000442730 ERBB3P21860 1342 aa30.79■■■□□ 2.52
HDLBP-220ENST00000442730 PDE3BQ13370 1112 aa30.79■■■□□ 2.52
HDLBP-220ENST00000442730 DEFB132Q7Z7B7 95 aa30.79■■■□□ 2.52
HDLBP-220ENST00000442730 CARD10Q9BWT7 1032 aa30.79■■■□□ 2.52
HDLBP-220ENST00000442730 KIF20BQ96Q89 1820 aa30.79■■■□□ 2.52
HDLBP-220ENST00000442730 TNS1Q9HBL0 1735 aaKnown RBP30.78■■■□□ 2.52
HDLBP-220ENST00000442730 FYB1O15117 783 aa30.78■■■□□ 2.52
HDLBP-220ENST00000442730 DISP2A7MBM2 1401 aa30.78■■■□□ 2.52
HDLBP-220ENST00000442730 FAM196AQ6ZSG2 479 aa30.77■■■□□ 2.52
HDLBP-220ENST00000442730 CARD14Q9BXL6 1004 aa30.77■■■□□ 2.52
HDLBP-220ENST00000442730 NSD3Q9BZ95 1437 aa30.77■■■□□ 2.52
HDLBP-220ENST00000442730 GGNBP2Q9H3C7 697 aa30.75■■■□□ 2.51
HDLBP-220ENST00000442730 CCDC7Q96M83 1385 aa30.75■■■□□ 2.51
HDLBP-220ENST00000442730 MAP3K19Q56UN5 1328 aa30.73■■■□□ 2.51
HDLBP-220ENST00000442730 PEAK1Q9H792 1746 aa30.73■■■□□ 2.51
HDLBP-220ENST00000442730 CDCA7Q9BWT1 371 aaPredicted RBP30.73■■■□□ 2.51
HDLBP-220ENST00000442730 ANKRD24Q8TF21 1146 aa30.72■■■□□ 2.51
HDLBP-220ENST00000442730 IP6K1Q92551 441 aa30.72■■■□□ 2.51
HDLBP-220ENST00000442730 FBLN1P23142 703 aa30.71■■■□□ 2.51
HDLBP-220ENST00000442730 BAG6P46379 1132 aa30.7■■■□□ 2.51
HDLBP-220ENST00000442730 DDB1Q16531 1140 aa30.7■■■□□ 2.51
HDLBP-220ENST00000442730 POLR3GLQ9BT43 218 aa30.69■■■□□ 2.5
HDLBP-220ENST00000442730 OVOS2A0A0G2JMS6 1433 aa30.69■■■□□ 2.5
HDLBP-220ENST00000442730 FAM208AQ9UK61 1670 aaKnown RBP30.68■■■□□ 2.5
HDLBP-220ENST00000442730 RTL1A6NKG5 1358 aa30.68■■■□□ 2.5
HDLBP-220ENST00000442730 TRIM37O94972 964 aa30.68■■■□□ 2.5
HDLBP-220ENST00000442730 NLRP2Q9NX02 1062 aa30.68■■■□□ 2.5
HDLBP-220ENST00000442730 HOXC9P31274 260 aa30.66■■■□□ 2.5
HDLBP-220ENST00000442730 TNS2Q63HR2 1409 aa30.65■■■□□ 2.5
HDLBP-220ENST00000442730 AMPHP49418 695 aa30.64■■■□□ 2.5
HDLBP-220ENST00000442730 RRS1Q15050 365 aaKnown RBP30.64■■■□□ 2.5
HDLBP-220ENST00000442730 C11orf95C9JLR9 678 aaPredicted RBP30.62■■■□□ 2.49
HDLBP-220ENST00000442730 EN1Q05925 392 aaPredicted RBP30.62■■■□□ 2.49
HDLBP-220ENST00000442730 CGNL1Q0VF96 1302 aa30.62■■■□□ 2.49
HDLBP-220ENST00000442730 MARCH10Q8NA82 808 aaPredicted RBP30.61■■■□□ 2.49
HDLBP-220ENST00000442730 LTV1Q96GA3 475 aaPredicted RBP30.61■■■□□ 2.49
HDLBP-220ENST00000442730 BCL9O00512 1426 aa30.6■■■□□ 2.49
HDLBP-220ENST00000442730 IL2RBP14784 551 aa30.58■■■□□ 2.49
HDLBP-220ENST00000442730 KIF24Q5T7B8 1368 aa30.56■■■□□ 2.48
HDLBP-220ENST00000442730 EXOC5O00471 708 aa30.56■■■□□ 2.48
HDLBP-220ENST00000442730 APBA3O96018 575 aa30.56■■■□□ 2.48
HDLBP-220ENST00000442730 SBF2Q86WG5 1849 aa30.56■■■□□ 2.48
HDLBP-220ENST00000442730 ANKRD26Q9UPS8 1709 aa30.56■■■□□ 2.48
HDLBP-220ENST00000442730 FLT4P35916 1363 aa30.55■■■□□ 2.48
HDLBP-220ENST00000442730 PARD3Q8TEW0 1356 aa30.55■■■□□ 2.48
HDLBP-220ENST00000442730 CAMKK2Q96RR4 588 aa30.55■■■□□ 2.48
HDLBP-220ENST00000442730 PANK3Q9H999 370 aa30.54■■■□□ 2.48
HDLBP-220ENST00000442730 INSRP06213 1382 aa30.54■■■□□ 2.48
HDLBP-220ENST00000442730 SRCAPQ6ZRS2 3230 aa30.53■■■□□ 2.48
HDLBP-220ENST00000442730 EZH2Q15910 746 aaKnown RBP30.53■■■□□ 2.48
HDLBP-220ENST00000442730 SMG6Q86US8 1419 aaKnown RBP30.53■■■□□ 2.48
HDLBP-220ENST00000442730 RGPD2P0DJD1 1756 aa30.53■■■□□ 2.48
HDLBP-220ENST00000442730 RREB1Q92766 1687 aa30.52■■■□□ 2.48
HDLBP-220ENST00000442730 KIF7Q2M1P5 1343 aa30.51■■■□□ 2.48
HDLBP-220ENST00000442730 EMILIN1Q9Y6C2 1016 aa30.51■■■□□ 2.47
HDLBP-220ENST00000442730 HSP90AB2PQ58FF8 381 aa30.5■■■□□ 2.47
HDLBP-220ENST00000442730 RGPD3A6NKT7 1758 aaPredicted RBP30.49■■■□□ 2.47
HDLBP-220ENST00000442730 RGPD4Q7Z3J3 1758 aa30.49■■■□□ 2.47
HDLBP-220ENST00000442730 MEGF6O75095 1541 aa30.48■■■□□ 2.47
HDLBP-220ENST00000442730 PTF1AQ7RTS3 328 aa30.48■■■□□ 2.47
HDLBP-220ENST00000442730 BCL11BQ9C0K0 894 aaPredicted RBP30.47■■■□□ 2.47
HDLBP-220ENST00000442730 NUP188Q5SRE5 1749 aa30.47■■■□□ 2.47
HDLBP-220ENST00000442730 NSD2O96028 1365 aa30.46■■■□□ 2.47
HDLBP-220ENST00000442730 NBPF6Q5VWK0 638 aa30.46■■■□□ 2.47
HDLBP-220ENST00000442730 NBPF4Q96M43 638 aa30.46■■■□□ 2.47
HDLBP-220ENST00000442730 NHSQ6T4R5 1651 aa30.45■■■□□ 2.46
HDLBP-220ENST00000442730 USHBP1Q8N6Y0 703 aa30.42■■■□□ 2.46
HDLBP-220ENST00000442730 SHANK3Q9BYB0 1731 aa30.42■■■□□ 2.46
HDLBP-220ENST00000442730 PSDA5PKW4 1024 aaPredicted RBP30.4■■■□□ 2.46
HDLBP-220ENST00000442730 PPM1GO15355 546 aaPredicted RBP30.4■■■□□ 2.46
HDLBP-220ENST00000442730 POLKQ9UBT6 870 aa30.4■■■□□ 2.46
HDLBP-220ENST00000442730 MAP2P11137 1827 aaKnown RBP30.4■■■□□ 2.46
HDLBP-220ENST00000442730 TNNT2P45379 298 aaPredicted RBP30.39■■■□□ 2.46
HDLBP-220ENST00000442730 WASHC2AQ641Q2 1341 aa30.39■■■□□ 2.46
HDLBP-220ENST00000442730 PLSCR1O15162 318 aa30.38■■■□□ 2.45
HDLBP-220ENST00000442730 NCAPD2Q15021 1401 aa30.38■■■□□ 2.45
HDLBP-220ENST00000442730 KCNQ2O43526 872 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms