RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 SPON1Q9HCB6 807 aa17.17■□□□□ 0.34
TNXB-202ENST00000442721 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
TNXB-202ENST00000442721 AKAP12Q02952 1782 aa17.17■□□□□ 0.34
TNXB-202ENST00000442721 EVC2Q86UK5 1308 aa17.17■□□□□ 0.34
TNXB-202ENST00000442721 CASZ1Q86V15 1759 aa17.16■□□□□ 0.34
TNXB-202ENST00000442721 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
TNXB-202ENST00000442721 ARHGEF25Q86VW2 580 aa17.16■□□□□ 0.34
TNXB-202ENST00000442721 L3MBTL2Q969R5 705 aa17.16■□□□□ 0.34
TNXB-202ENST00000442721 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
TNXB-202ENST00000442721 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
TNXB-202ENST00000442721 PTF1AQ7RTS3 328 aa17.15■□□□□ 0.34
TNXB-202ENST00000442721 CDCA7Q9BWT1 371 aaPredicted RBP17.15■□□□□ 0.34
TNXB-202ENST00000442721 ANO8Q9HCE9 1232 aaPredicted RBP17.15■□□□□ 0.34
TNXB-202ENST00000442721 TTC21BQ7Z4L5 1316 aa17.15■□□□□ 0.34
TNXB-202ENST00000442721 RGPD5Q99666 1765 aa17.15■□□□□ 0.34
TNXB-202ENST00000442721 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
TNXB-202ENST00000442721 NFAT5O94916 1531 aa17.14■□□□□ 0.33
TNXB-202ENST00000442721 KCNH5Q8NCM2 988 aa17.13■□□□□ 0.33
TNXB-202ENST00000442721 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
TNXB-202ENST00000442721 CARD10Q9BWT7 1032 aa17.13■□□□□ 0.33
TNXB-202ENST00000442721 TTC21AQ8NDW8 1320 aa17.13■□□□□ 0.33
TNXB-202ENST00000442721 ABCC6O95255 1503 aa17.12■□□□□ 0.33
TNXB-202ENST00000442721 PROM2Q8N271 834 aa17.12■□□□□ 0.33
TNXB-202ENST00000442721 PPP1R1BQ9UD71 204 aaPredicted RBP17.12■□□□□ 0.33
TNXB-202ENST00000442721 YY1P25490 414 aa17.11■□□□□ 0.33
TNXB-202ENST00000442721 ROCK2O75116 1388 aaKnown RBP17.09■□□□□ 0.33
TNXB-202ENST00000442721 USP54Q70EL1 1684 aa17.09■□□□□ 0.33
TNXB-202ENST00000442721 MON2Q7Z3U7 1717 aa17.09■□□□□ 0.33
TNXB-202ENST00000442721 CCDC7Q96M83 1385 aa17.08■□□□□ 0.32
TNXB-202ENST00000442721 TNS2Q63HR2 1409 aa17.07■□□□□ 0.32
TNXB-202ENST00000442721 KTN1Q86UP2 1357 aaKnown RBP17.07■□□□□ 0.32
TNXB-202ENST00000442721 PDGFDQ9GZP0 370 aaPredicted RBP17.07■□□□□ 0.32
TNXB-202ENST00000442721 USP31Q70CQ4 1352 aa17.06■□□□□ 0.32
TNXB-202ENST00000442721 SBNO2Q9Y2G9 1366 aa17.06■□□□□ 0.32
TNXB-202ENST00000442721 SOX12O15370 315 aa17.06■□□□□ 0.32
TNXB-202ENST00000442721 CSB-PGBD3P0DP91 1061 aa17.06■□□□□ 0.32
TNXB-202ENST00000442721 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
TNXB-202ENST00000442721 MYOM1P52179 1685 aa17.05■□□□□ 0.32
TNXB-202ENST00000442721 EXOC5O00471 708 aa17.05■□□□□ 0.32
TNXB-202ENST00000442721 PTGER2P43116 358 aa17.05■□□□□ 0.32
TNXB-202ENST00000442721 TXNRD1Q16881 649 aa17.05■□□□□ 0.32
TNXB-202ENST00000442721 NHSQ6T4R5 1651 aa17.04■□□□□ 0.32
TNXB-202ENST00000442721 CD163L1Q9NR16 1453 aa17.04■□□□□ 0.32
TNXB-202ENST00000442721 ZBTB7AO95365 584 aa17.03■□□□□ 0.32
TNXB-202ENST00000442721 ERBB3P21860 1342 aa17.02■□□□□ 0.32
TNXB-202ENST00000442721 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
TNXB-202ENST00000442721 SLC15A2Q16348 729 aa17.02■□□□□ 0.32
TNXB-202ENST00000442721 PIAS4Q8N2W9 510 aaPredicted RBP17.02■□□□□ 0.32
TNXB-202ENST00000442721 STK32BQ9NY57 414 aa17.02■□□□□ 0.32
TNXB-202ENST00000442721 PAPPAQ13219 1627 aa17.01■□□□□ 0.31
TNXB-202ENST00000442721 LTN1O94822 1766 aa17■□□□□ 0.31
TNXB-202ENST00000442721 NEUROD1Q13562 356 aa16.99■□□□□ 0.31
TNXB-202ENST00000442721 NME9Q86XW9 330 aa16.99■□□□□ 0.31
TNXB-202ENST00000442721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.99■□□□□ 0.31
TNXB-202ENST00000442721 SGIP1Q9BQI5 828 aa16.99■□□□□ 0.31
TNXB-202ENST00000442721 ATF5Q9Y2D1 282 aaPredicted RBP16.99■□□□□ 0.31
TNXB-202ENST00000442721 MTFR1LQ9H019 292 aa16.98■□□□□ 0.31
TNXB-202ENST00000442721 BTAF1O14981 1849 aa16.98■□□□□ 0.31
TNXB-202ENST00000442721 EDC4Q6P2E9 1401 aaKnown RBP16.97■□□□□ 0.31
TNXB-202ENST00000442721 IL2RBP14784 551 aa16.97■□□□□ 0.31
TNXB-202ENST00000442721 NLRP2Q9NX02 1062 aa16.97■□□□□ 0.31
TNXB-202ENST00000442721 ACSBG1Q96GR2 724 aa16.96■□□□□ 0.31
TNXB-202ENST00000442721 IFFO2Q5TF58 517 aa16.95■□□□□ 0.3
TNXB-202ENST00000442721 ANKRD24Q8TF21 1146 aa16.95■□□□□ 0.3
TNXB-202ENST00000442721 SYT17Q9BSW7 474 aa16.95■□□□□ 0.3
TNXB-202ENST00000442721 FHDC1Q9C0D6 1143 aaPredicted RBP16.95■□□□□ 0.3
TNXB-202ENST00000442721 UTRNP46939 3433 aa16.95■□□□□ 0.3
TNXB-202ENST00000442721 SLC12A5Q9H2X9 1139 aa16.94■□□□□ 0.3
TNXB-202ENST00000442721 A0A1W2PP64 1363 aa16.93■□□□□ 0.3
TNXB-202ENST00000442721 HDGFL2Q7Z4V5 671 aaPredicted RBP16.93■□□□□ 0.3
TNXB-202ENST00000442721 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
TNXB-202ENST00000442721 MAP3K5Q99683 1374 aa16.92■□□□□ 0.3
TNXB-202ENST00000442721 ZNF827Q17R98 1081 aa16.92■□□□□ 0.3
TNXB-202ENST00000442721 TMC1Q8TDI8 760 aa16.92■□□□□ 0.3
TNXB-202ENST00000442721 PUS7Q96PZ0 661 aaKnown RBP16.92■□□□□ 0.3
TNXB-202ENST00000442721 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
TNXB-202ENST00000442721 FAM208AQ9UK61 1670 aaKnown RBP16.91■□□□□ 0.3
TNXB-202ENST00000442721 LRRC4BQ9NT99 713 aa16.91■□□□□ 0.3
TNXB-202ENST00000442721 QSER1Q2KHR3 1735 aa16.9■□□□□ 0.3
TNXB-202ENST00000442721 CHD4Q14839 1912 aa16.9■□□□□ 0.3
TNXB-202ENST00000442721 ZNF784Q8NCA9 323 aaPredicted RBP16.9■□□□□ 0.3
TNXB-202ENST00000442721 IP6K1Q92551 441 aa16.9■□□□□ 0.3
TNXB-202ENST00000442721 TERF2IPQ9NYB0 399 aa16.9■□□□□ 0.3
TNXB-202ENST00000442721 AKT1S1Q96B36 256 aa16.89■□□□□ 0.29
TNXB-202ENST00000442721 ARXQ96QS3 562 aa16.89■□□□□ 0.29
TNXB-202ENST00000442721 COL24A1Q17RW2 1714 aa16.89■□□□□ 0.29
TNXB-202ENST00000442721 SLC27A3Q5K4L6 730 aa16.87■□□□□ 0.29
TNXB-202ENST00000442721 SHANK3Q9BYB0 1731 aa16.85■□□□□ 0.29
TNXB-202ENST00000442721 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
TNXB-202ENST00000442721 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
TNXB-202ENST00000442721 TESK2Q96S53 571 aa16.85■□□□□ 0.29
TNXB-202ENST00000442721 MAP3K19Q56UN5 1328 aa16.85■□□□□ 0.29
TNXB-202ENST00000442721 DDX54Q8TDD1 881 aaKnown RBP16.84■□□□□ 0.29
TNXB-202ENST00000442721 SLC16A10Q8TF71 515 aa16.84■□□□□ 0.29
TNXB-202ENST00000442721 PNPLA7Q6ZV29 1317 aa16.84■□□□□ 0.29
TNXB-202ENST00000442721 NSD2O96028 1365 aa16.84■□□□□ 0.29
TNXB-202ENST00000442721 ANKRD36BQ8N2N9 1353 aa16.84■□□□□ 0.29
TNXB-202ENST00000442721 LY75O60449 1722 aa16.84■□□□□ 0.29
TNXB-202ENST00000442721 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
TNXB-202ENST00000442721 RGPD2P0DJD1 1756 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms