RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 BCL9O00512 1426 aa20.5■□□□□ 0.87
LINC00642-202ENST00000442515 AATKQ6ZMQ8 1374 aa20.49■□□□□ 0.87
LINC00642-202ENST00000442515 TOM1L2Q6ZVM7 507 aa20.49■□□□□ 0.87
LINC00642-202ENST00000442515 MARCH10Q8NA82 808 aaPredicted RBP20.49■□□□□ 0.87
LINC00642-202ENST00000442515 SLC15A2Q16348 729 aa20.48■□□□□ 0.87
LINC00642-202ENST00000442515 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
LINC00642-202ENST00000442515 MTFR1LQ9H019 292 aa20.48■□□□□ 0.87
LINC00642-202ENST00000442515 IFFO2Q5TF58 517 aa20.47■□□□□ 0.87
LINC00642-202ENST00000442515 STAC3Q96MF2 364 aa20.47■□□□□ 0.87
LINC00642-202ENST00000442515 SGIP1Q9BQI5 828 aa20.47■□□□□ 0.87
LINC00642-202ENST00000442515 SBF2Q86WG5 1849 aa20.46■□□□□ 0.87
LINC00642-202ENST00000442515 PPIP5K1Q6PFW1 1433 aa20.45■□□□□ 0.86
LINC00642-202ENST00000442515 SLIT3O75094 1523 aa20.44■□□□□ 0.86
LINC00642-202ENST00000442515 CDCA7Q9BWT1 371 aaPredicted RBP20.44■□□□□ 0.86
LINC00642-202ENST00000442515 WDR17Q8IZU2 1322 aa20.44■□□□□ 0.86
LINC00642-202ENST00000442515 NLRP6P59044 892 aa20.42■□□□□ 0.86
LINC00642-202ENST00000442515 BRD4O60885 1362 aaPredicted RBP20.42■□□□□ 0.86
LINC00642-202ENST00000442515 MAP3K5Q99683 1374 aa20.42■□□□□ 0.86
LINC00642-202ENST00000442515 SRPK2P78362 688 aaKnown RBP20.41■□□□□ 0.86
LINC00642-202ENST00000442515 ARXQ96QS3 562 aa20.41■□□□□ 0.86
LINC00642-202ENST00000442515 AXIN2Q9Y2T1 843 aa20.41■□□□□ 0.86
LINC00642-202ENST00000442515 RAB3GAP2Q9H2M9 1393 aa20.41■□□□□ 0.86
LINC00642-202ENST00000442515 USP6P35125 1406 aa20.4■□□□□ 0.86
LINC00642-202ENST00000442515 CABP2Q9NPB3 220 aa20.39■□□□□ 0.85
LINC00642-202ENST00000442515 CPSF1Q10570 1443 aaKnown RBP20.38■□□□□ 0.85
LINC00642-202ENST00000442515 GIGYF1O75420 1035 aaPredicted RBP20.38■□□□□ 0.85
LINC00642-202ENST00000442515 WNK3Q9BYP7 1800 aa20.38■□□□□ 0.85
LINC00642-202ENST00000442515 CARD10Q9BWT7 1032 aa20.36■□□□□ 0.85
LINC00642-202ENST00000442515 COL18A1P39060 1754 aa20.36■□□□□ 0.85
LINC00642-202ENST00000442515 TNS2Q63HR2 1409 aa20.36■□□□□ 0.85
LINC00642-202ENST00000442515 EXOC5O00471 708 aa20.35■□□□□ 0.85
LINC00642-202ENST00000442515 CSB-PGBD3P0DP91 1061 aa20.35■□□□□ 0.85
LINC00642-202ENST00000442515 GPR162Q16538 588 aa20.35■□□□□ 0.85
LINC00642-202ENST00000442515 CHD4Q14839 1912 aa20.35■□□□□ 0.85
LINC00642-202ENST00000442515 AKAP12Q02952 1782 aa20.34■□□□□ 0.85
LINC00642-202ENST00000442515 ARHGEF25Q86VW2 580 aa20.34■□□□□ 0.85
LINC00642-202ENST00000442515 CABP1Q9NZU7 370 aa20.34■□□□□ 0.85
LINC00642-202ENST00000442515 PAPPAQ13219 1627 aa20.34■□□□□ 0.85
LINC00642-202ENST00000442515 PIK3C2AO00443 1686 aa20.32■□□□□ 0.84
LINC00642-202ENST00000442515 CENPJQ9HC77 1338 aaPredicted RBP20.32■□□□□ 0.84
LINC00642-202ENST00000442515 ZNF827Q17R98 1081 aa20.32■□□□□ 0.84
LINC00642-202ENST00000442515 NBPF1Q3BBV0 1214 aa20.31■□□□□ 0.84
LINC00642-202ENST00000442515 ACSBG1Q96GR2 724 aa20.31■□□□□ 0.84
LINC00642-202ENST00000442515 CCDC7Q96M83 1385 aa20.31■□□□□ 0.84
LINC00642-202ENST00000442515 NHSQ6T4R5 1651 aa20.3■□□□□ 0.84
LINC00642-202ENST00000442515 SOX12O15370 315 aa20.3■□□□□ 0.84
LINC00642-202ENST00000442515 KLHL34Q8N239 644 aa20.29■□□□□ 0.84
LINC00642-202ENST00000442515 TRPM1Q7Z4N2 1603 aa20.28■□□□□ 0.84
LINC00642-202ENST00000442515 KCNH5Q8NCM2 988 aa20.28■□□□□ 0.84
LINC00642-202ENST00000442515 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
LINC00642-202ENST00000442515 KIAA1210Q9ULL0 1709 aa20.27■□□□□ 0.83
LINC00642-202ENST00000442515 ABCC6O95255 1503 aa20.27■□□□□ 0.83
LINC00642-202ENST00000442515 LRRC4BQ9NT99 713 aa20.26■□□□□ 0.83
LINC00642-202ENST00000442515 TTC21BQ7Z4L5 1316 aa20.26■□□□□ 0.83
LINC00642-202ENST00000442515 QRICH2Q9H0J4 1663 aa20.26■□□□□ 0.83
LINC00642-202ENST00000442515 SHANK3Q9BYB0 1731 aa20.25■□□□□ 0.83
LINC00642-202ENST00000442515 NFAT5O94916 1531 aa20.25■□□□□ 0.83
LINC00642-202ENST00000442515 POLD1P28340 1107 aa20.24■□□□□ 0.83
LINC00642-202ENST00000442515 NLGN2Q8NFZ4 835 aa20.23■□□□□ 0.83
LINC00642-202ENST00000442515 AKT1S1Q96B36 256 aa20.23■□□□□ 0.83
LINC00642-202ENST00000442515 SLC16A10Q8TF71 515 aa20.22■□□□□ 0.83
LINC00642-202ENST00000442515 ERBB3P21860 1342 aa20.2■□□□□ 0.82
LINC00642-202ENST00000442515 PNPLA7Q6ZV29 1317 aa20.2■□□□□ 0.82
LINC00642-202ENST00000442515 TTC21AQ8NDW8 1320 aa20.2■□□□□ 0.82
LINC00642-202ENST00000442515 RGPD5Q99666 1765 aa20.19■□□□□ 0.82
LINC00642-202ENST00000442515 IL2RBP14784 551 aa20.19■□□□□ 0.82
LINC00642-202ENST00000442515 YBX3P16989 372 aaKnown RBP eCLIP20.18■□□□□ 0.82
LINC00642-202ENST00000442515 ZNF692Q9BU19 519 aaPredicted RBP20.18■□□□□ 0.82
LINC00642-202ENST00000442515 NLRP2Q9NX02 1062 aa20.18■□□□□ 0.82
LINC00642-202ENST00000442515 EVC2Q86UK5 1308 aa20.18■□□□□ 0.82
LINC00642-202ENST00000442515 BTAF1O14981 1849 aa20.18■□□□□ 0.82
LINC00642-202ENST00000442515 SLC27A3Q5K4L6 730 aa20.17■□□□□ 0.82
LINC00642-202ENST00000442515 ATP10DQ9P241 1426 aa20.16■□□□□ 0.82
LINC00642-202ENST00000442515 GRIN3BO60391 1043 aa20.15■□□□□ 0.82
LINC00642-202ENST00000442515 TFCP2L1Q9NZI6 479 aa20.15■□□□□ 0.82
LINC00642-202ENST00000442515 KCNQ4P56696 695 aa20.13■□□□□ 0.81
LINC00642-202ENST00000442515 COL24A1Q17RW2 1714 aa20.13■□□□□ 0.81
LINC00642-202ENST00000442515 KTN1Q86UP2 1357 aaKnown RBP20.12■□□□□ 0.81
LINC00642-202ENST00000442515 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
LINC00642-202ENST00000442515 QSER1Q2KHR3 1735 aa20.11■□□□□ 0.81
LINC00642-202ENST00000442515 USP31Q70CQ4 1352 aa20.09■□□□□ 0.81
LINC00642-202ENST00000442515 GPBP1L1Q9HC44 474 aaPredicted RBP20.09■□□□□ 0.81
LINC00642-202ENST00000442515 HSPA6P17066 643 aa20.08■□□□□ 0.81
LINC00642-202ENST00000442515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.08■□□□□ 0.81
LINC00642-202ENST00000442515 DDX54Q8TDD1 881 aaKnown RBP20.08■□□□□ 0.81
LINC00642-202ENST00000442515 SYTL4Q96C24 671 aaPredicted RBP20.07■□□□□ 0.8
LINC00642-202ENST00000442515 ADCY9O60503 1353 aa20.07■□□□□ 0.8
LINC00642-202ENST00000442515 NME9Q86XW9 330 aa20.06■□□□□ 0.8
LINC00642-202ENST00000442515 TUBGCP6Q96RT7 1819 aa20.06■□□□□ 0.8
LINC00642-202ENST00000442515 NSD2O96028 1365 aa20.06■□□□□ 0.8
LINC00642-202ENST00000442515 ANKRD36BQ8N2N9 1353 aa20.06■□□□□ 0.8
LINC00642-202ENST00000442515 MSH5O43196 834 aa20.04■□□□□ 0.8
LINC00642-202ENST00000442515 PRIM1P49642 420 aaKnown RBP20.04■□□□□ 0.8
LINC00642-202ENST00000442515 MSL1Q68DK7 614 aa20.04■□□□□ 0.8
LINC00642-202ENST00000442515 ZNF526Q8TF50 670 aaPredicted RBP20.04■□□□□ 0.8
LINC00642-202ENST00000442515 COL23A1Q86Y22 540 aaPredicted RBP20.03■□□□□ 0.8
LINC00642-202ENST00000442515 CCNL1Q9UK58 526 aaPredicted RBP20.03■□□□□ 0.8
LINC00642-202ENST00000442515 SBNO2Q9Y2G9 1366 aa20.03■□□□□ 0.8
LINC00642-202ENST00000442515 USP54Q70EL1 1684 aa20.03■□□□□ 0.8
LINC00642-202ENST00000442515 MON2Q7Z3U7 1717 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms