RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 COL5A2P05997 1499 aaPredicted RBP13.49□□□□□ -0.25
ABCF1-203ENST00000441867 BRD4O60885 1362 aaPredicted RBP13.49□□□□□ -0.25
ABCF1-203ENST00000441867 TXNRD1Q16881 649 aa13.49□□□□□ -0.25
ABCF1-203ENST00000441867 DCAF11Q8TEB1 546 aa13.49□□□□□ -0.25
ABCF1-203ENST00000441867 KDM2AQ9Y2K7 1162 aa13.49□□□□□ -0.25
ABCF1-203ENST00000441867 AATKQ6ZMQ8 1374 aa13.48□□□□□ -0.25
ABCF1-203ENST00000441867 TOM1L2Q6ZVM7 507 aa13.48□□□□□ -0.25
ABCF1-203ENST00000441867 RGPD3A6NKT7 1758 aaPredicted RBP13.48□□□□□ -0.25
ABCF1-203ENST00000441867 RGPD4Q7Z3J3 1758 aa13.48□□□□□ -0.25
ABCF1-203ENST00000441867 ARXQ96QS3 562 aa13.47□□□□□ -0.25
ABCF1-203ENST00000441867 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
ABCF1-203ENST00000441867 LMO7Q8WWI1 1683 aa13.47□□□□□ -0.25
ABCF1-203ENST00000441867 MAP3K5Q99683 1374 aa13.46□□□□□ -0.25
ABCF1-203ENST00000441867 CASZ1Q86V15 1759 aa13.46□□□□□ -0.25
ABCF1-203ENST00000441867 PTF1AQ7RTS3 328 aa13.46□□□□□ -0.25
ABCF1-203ENST00000441867 MARCH10Q8NA82 808 aaPredicted RBP13.46□□□□□ -0.25
ABCF1-203ENST00000441867 SGIP1Q9BQI5 828 aa13.46□□□□□ -0.25
ABCF1-203ENST00000441867 ITSN1Q15811 1721 aa13.46□□□□□ -0.25
ABCF1-203ENST00000441867 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
ABCF1-203ENST00000441867 PEAK1Q9H792 1746 aa13.44□□□□□ -0.26
ABCF1-203ENST00000441867 WDR17Q8IZU2 1322 aa13.44□□□□□ -0.26
ABCF1-203ENST00000441867 MYOM1P52179 1685 aa13.44□□□□□ -0.26
ABCF1-203ENST00000441867 NLRP6P59044 892 aa13.44□□□□□ -0.26
ABCF1-203ENST00000441867 GPR162Q16538 588 aa13.44□□□□□ -0.26
ABCF1-203ENST00000441867 EXOC5O00471 708 aa13.43□□□□□ -0.26
ABCF1-203ENST00000441867 SRPK2P78362 688 aaKnown RBP13.42□□□□□ -0.26
ABCF1-203ENST00000441867 CARD10Q9BWT7 1032 aa13.42□□□□□ -0.26
ABCF1-203ENST00000441867 PCGF6Q9BYE7 350 aa13.41□□□□□ -0.26
ABCF1-203ENST00000441867 GOLGB1Q14789 3259 aaKnown RBP13.4□□□□□ -0.26
ABCF1-203ENST00000441867 PPIP5K1Q6PFW1 1433 aa13.39□□□□□ -0.27
ABCF1-203ENST00000441867 CSB-PGBD3P0DP91 1061 aa13.39□□□□□ -0.27
ABCF1-203ENST00000441867 KCNH5Q8NCM2 988 aa13.39□□□□□ -0.27
ABCF1-203ENST00000441867 SLC16A10Q8TF71 515 aa13.39□□□□□ -0.27
ABCF1-203ENST00000441867 AXIN2Q9Y2T1 843 aa13.39□□□□□ -0.27
ABCF1-203ENST00000441867 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
ABCF1-203ENST00000441867 POLD1P28340 1107 aa13.38□□□□□ -0.27
ABCF1-203ENST00000441867 ARHGEF25Q86VW2 580 aa13.38□□□□□ -0.27
ABCF1-203ENST00000441867 CCDC7Q96M83 1385 aa13.37□□□□□ -0.27
ABCF1-203ENST00000441867 HSPA6P17066 643 aa13.37□□□□□ -0.27
ABCF1-203ENST00000441867 TOPAZ1Q8N9V7 1692 aa13.37□□□□□ -0.27
ABCF1-203ENST00000441867 SLIT3O75094 1523 aa13.36□□□□□ -0.27
ABCF1-203ENST00000441867 GRIN3BO60391 1043 aa13.36□□□□□ -0.27
ABCF1-203ENST00000441867 CAPN15O75808 1086 aa13.36□□□□□ -0.27
ABCF1-203ENST00000441867 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
ABCF1-203ENST00000441867 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
ABCF1-203ENST00000441867 CABP1Q9NZU7 370 aa13.36□□□□□ -0.27
ABCF1-203ENST00000441867 USP6P35125 1406 aa13.36□□□□□ -0.27
ABCF1-203ENST00000441867 CPSF1Q10570 1443 aaKnown RBP13.36□□□□□ -0.27
ABCF1-203ENST00000441867 SBF2Q86WG5 1849 aa13.36□□□□□ -0.27
ABCF1-203ENST00000441867 ARHGEF28Q8N1W1 1705 aaKnown RBP13.35□□□□□ -0.27
ABCF1-203ENST00000441867 CENPJQ9HC77 1338 aaPredicted RBP13.35□□□□□ -0.27
ABCF1-203ENST00000441867 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
ABCF1-203ENST00000441867 TNS2Q63HR2 1409 aa13.33□□□□□ -0.28
ABCF1-203ENST00000441867 SLC27A3Q5K4L6 730 aa13.33□□□□□ -0.28
ABCF1-203ENST00000441867 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
ABCF1-203ENST00000441867 SHANK3Q9BYB0 1731 aa13.33□□□□□ -0.28
ABCF1-203ENST00000441867 ZNF827Q17R98 1081 aa13.32□□□□□ -0.28
ABCF1-203ENST00000441867 ACSBG1Q96GR2 724 aa13.32□□□□□ -0.28
ABCF1-203ENST00000441867 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
ABCF1-203ENST00000441867 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
ABCF1-203ENST00000441867 LRRC4BQ9NT99 713 aa13.3□□□□□ -0.28
ABCF1-203ENST00000441867 TTC21BQ7Z4L5 1316 aa13.3□□□□□ -0.28
ABCF1-203ENST00000441867 TTC21AQ8NDW8 1320 aa13.3□□□□□ -0.28
ABCF1-203ENST00000441867 SOX12O15370 315 aa13.29□□□□□ -0.28
ABCF1-203ENST00000441867 IL2RBP14784 551 aa13.29□□□□□ -0.28
ABCF1-203ENST00000441867 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
ABCF1-203ENST00000441867 TFCP2L1Q9NZI6 479 aa13.29□□□□□ -0.28
ABCF1-203ENST00000441867 COL18A1P39060 1754 aa13.28□□□□□ -0.28
ABCF1-203ENST00000441867 COL13A1Q5TAT6 717 aaPredicted RBP13.28□□□□□ -0.28
ABCF1-203ENST00000441867 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
ABCF1-203ENST00000441867 NLRP2Q9NX02 1062 aa13.28□□□□□ -0.28
ABCF1-203ENST00000441867 EVC2Q86UK5 1308 aa13.28□□□□□ -0.28
ABCF1-203ENST00000441867 AKAP12Q02952 1782 aa13.27□□□□□ -0.28
ABCF1-203ENST00000441867 NLGN2Q8NFZ4 835 aa13.27□□□□□ -0.29
ABCF1-203ENST00000441867 GPBP1L1Q9HC44 474 aaPredicted RBP13.27□□□□□ -0.29
ABCF1-203ENST00000441867 PNPLA7Q6ZV29 1317 aa13.27□□□□□ -0.29
ABCF1-203ENST00000441867 ABCC6O95255 1503 aa13.27□□□□□ -0.29
ABCF1-203ENST00000441867 PAPPAQ13219 1627 aa13.27□□□□□ -0.29
ABCF1-203ENST00000441867 YBX3P16989 372 aaKnown RBP eCLIP13.26□□□□□ -0.291e-7■□□□□ 8.2
ABCF1-203ENST00000441867 NHSQ6T4R5 1651 aa13.25□□□□□ -0.29
ABCF1-203ENST00000441867 TRPM1Q7Z4N2 1603 aa13.25□□□□□ -0.29
ABCF1-203ENST00000441867 ATP10DQ9P241 1426 aa13.25□□□□□ -0.29
ABCF1-203ENST00000441867 ERBB3P21860 1342 aa13.25□□□□□ -0.29
ABCF1-203ENST00000441867 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
ABCF1-203ENST00000441867 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
ABCF1-203ENST00000441867 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
ABCF1-203ENST00000441867 WNK3Q9BYP7 1800 aa13.24□□□□□ -0.29
ABCF1-203ENST00000441867 KIAA1210Q9ULL0 1709 aa13.24□□□□□ -0.29
ABCF1-203ENST00000441867 DNAJC5GQ8N7S2 189 aa13.23□□□□□ -0.29
ABCF1-203ENST00000441867 PIK3C2AO00443 1686 aa13.23□□□□□ -0.29
ABCF1-203ENST00000441867 PRELPP51888 382 aa13.22□□□□□ -0.29
ABCF1-203ENST00000441867 CD2APQ9Y5K6 639 aa13.22□□□□□ -0.29
ABCF1-203ENST00000441867 KTN1Q86UP2 1357 aaKnown RBP13.21□□□□□ -0.29
ABCF1-203ENST00000441867 ANKRD24Q8TF21 1146 aa13.21□□□□□ -0.29
ABCF1-203ENST00000441867 NFAT5O94916 1531 aa13.21□□□□□ -0.29
ABCF1-203ENST00000441867 TNS4Q8IZW8 715 aa13.2□□□□□ -0.3
ABCF1-203ENST00000441867 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
ABCF1-203ENST00000441867 SYTL4Q96C24 671 aaPredicted RBP13.2□□□□□ -0.3
ABCF1-203ENST00000441867 QRICH2Q9H0J4 1663 aa13.2□□□□□ -0.3
ABCF1-203ENST00000441867 USP31Q70CQ4 1352 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms