RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 LRRC37A3O60309 1634 aa9.45□□□□□ -0.9
HDAC6-210ENST00000441703 YBX3P16989 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
HDAC6-210ENST00000441703 CRB1P82279 1406 aa9.44□□□□□ -0.9
HDAC6-210ENST00000441703 SPATA31E1Q6ZUB1 1445 aa9.44□□□□□ -0.9
HDAC6-210ENST00000441703 AKAP12Q02952 1782 aa9.43□□□□□ -0.9
HDAC6-210ENST00000441703 ZBTB7CA1YPR0 619 aa9.43□□□□□ -0.9
HDAC6-210ENST00000441703 SLC16A10Q8TF71 515 aa9.43□□□□□ -0.9
HDAC6-210ENST00000441703 HIRIP3Q9BW71 556 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-210ENST00000441703 AATKQ6ZMQ8 1374 aa9.42□□□□□ -0.9
HDAC6-210ENST00000441703 GTF3C3Q9Y5Q9 886 aa9.42□□□□□ -0.9
HDAC6-210ENST00000441703 TULP4Q9NRJ4 1543 aa9.41□□□□□ -0.9
HDAC6-210ENST00000441703 COL5A2P05997 1499 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-210ENST00000441703 CPDO75976 1380 aa9.41□□□□□ -0.9
HDAC6-210ENST00000441703 TOM1L2Q6ZVM7 507 aa9.41□□□□□ -0.9
HDAC6-210ENST00000441703 DNAJC5GQ8N7S2 189 aa9.41□□□□□ -0.9
HDAC6-210ENST00000441703 MARCH10Q8NA82 808 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-210ENST00000441703 LMO7Q8WWI1 1683 aa9.41□□□□□ -0.9
HDAC6-210ENST00000441703 BCL9O00512 1426 aa9.4□□□□□ -0.9
HDAC6-210ENST00000441703 ADCY9O60503 1353 aa9.4□□□□□ -0.9
HDAC6-210ENST00000441703 ITSN1Q15811 1721 aa9.4□□□□□ -0.9
HDAC6-210ENST00000441703 MINK1Q8N4C8 1332 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-210ENST00000441703 PRR36Q9H6K5 1346 aa9.4□□□□□ -0.9
HDAC6-210ENST00000441703 KIF3CO14782 793 aa9.4□□□□□ -0.9
HDAC6-210ENST00000441703 CDCA7Q9BWT1 371 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-210ENST00000441703 WWC3Q9ULE0 1092 aa9.4□□□□□ -0.9
HDAC6-210ENST00000441703 ZNF827Q17R98 1081 aa9.39□□□□□ -0.91
HDAC6-210ENST00000441703 ABTB2Q8N961 1025 aa9.39□□□□□ -0.91
HDAC6-210ENST00000441703 KLRG1Q96E93 195 aa9.39□□□□□ -0.91
HDAC6-210ENST00000441703 SLC4A1APQ9BWU0 796 aaKnown RBP9.39□□□□□ -0.91
HDAC6-210ENST00000441703 WASLO00401 505 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-210ENST00000441703 TOMM70O94826 608 aa9.38□□□□□ -0.91
HDAC6-210ENST00000441703 CFAP70Q5T0N1 1121 aa9.38□□□□□ -0.91
HDAC6-210ENST00000441703 C14orf93Q9H972 538 aaKnown RBP9.38□□□□□ -0.91
HDAC6-210ENST00000441703 PAPPAQ13219 1627 aa9.38□□□□□ -0.91
HDAC6-210ENST00000441703 WDR90Q96KV7 1748 aa9.37□□□□□ -0.91
HDAC6-210ENST00000441703 EXOC5O00471 708 aa9.37□□□□□ -0.91
HDAC6-210ENST00000441703 JMYQ8N9B5 988 aa9.37□□□□□ -0.91
HDAC6-210ENST00000441703 ACSBG1Q96GR2 724 aa9.37□□□□□ -0.91
HDAC6-210ENST00000441703 WNK3Q9BYP7 1800 aa9.37□□□□□ -0.91
HDAC6-210ENST00000441703 BRD4O60885 1362 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-210ENST00000441703 MSH5O43196 834 aa9.36□□□□□ -0.91
HDAC6-210ENST00000441703 GCP02774 474 aa9.36□□□□□ -0.91
HDAC6-210ENST00000441703 NLRP13Q86W25 1043 aa9.36□□□□□ -0.91
HDAC6-210ENST00000441703 TFCP2L1Q9NZI6 479 aa9.36□□□□□ -0.91
HDAC6-210ENST00000441703 TRAK1Q9UPV9 953 aa9.36□□□□□ -0.91
HDAC6-210ENST00000441703 ADGRB1O14514 1584 aa9.36□□□□□ -0.91
HDAC6-210ENST00000441703 NHSQ6T4R5 1651 aa9.36□□□□□ -0.91
HDAC6-210ENST00000441703 USP19O94966 1318 aa9.35□□□□□ -0.91
HDAC6-210ENST00000441703 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
HDAC6-210ENST00000441703 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
HDAC6-210ENST00000441703 NUDT16Q96DE0 195 aaKnown RBP9.35□□□□□ -0.91
HDAC6-210ENST00000441703 PNPLA7Q6ZV29 1317 aa9.34□□□□□ -0.91
HDAC6-210ENST00000441703 COL24A1Q17RW2 1714 aa9.34□□□□□ -0.91
HDAC6-210ENST00000441703 C16orf71Q8IYS4 520 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-210ENST00000441703 AKT1S1Q96B36 256 aa9.34□□□□□ -0.91
HDAC6-210ENST00000441703 GOLGB1Q14789 3259 aaKnown RBP9.34□□□□□ -0.91
HDAC6-210ENST00000441703 WDR17Q8IZU2 1322 aa9.33□□□□□ -0.92
HDAC6-210ENST00000441703 HTRA3P83110 453 aa9.33□□□□□ -0.92
HDAC6-210ENST00000441703 ARHGEF28Q8N1W1 1705 aaKnown RBP9.33□□□□□ -0.92
HDAC6-210ENST00000441703 ACEP12821 1306 aa9.32□□□□□ -0.92
HDAC6-210ENST00000441703 USP6P35125 1406 aa9.32□□□□□ -0.92
HDAC6-210ENST00000441703 SLC27A3Q5K4L6 730 aa9.32□□□□□ -0.92
HDAC6-210ENST00000441703 LRRC4BQ9NT99 713 aa9.32□□□□□ -0.92
HDAC6-210ENST00000441703 CD2APQ9Y5K6 639 aa9.32□□□□□ -0.92
HDAC6-210ENST00000441703 TNS2Q63HR2 1409 aa9.31□□□□□ -0.92
HDAC6-210ENST00000441703 BTAF1O14981 1849 aa9.31□□□□□ -0.92
HDAC6-210ENST00000441703 HSPA1AP0DMV8 641 aaKnown RBP9.31□□□□□ -0.92
HDAC6-210ENST00000441703 HSPA1BP0DMV9 641 aaKnown RBP9.31□□□□□ -0.92
HDAC6-210ENST00000441703 RBM46Q8TBY0 533 aaKnown RBP9.31□□□□□ -0.92
HDAC6-210ENST00000441703 CARD10Q9BWT7 1032 aa9.31□□□□□ -0.92
HDAC6-210ENST00000441703 KAT6BQ8WYB5 2073 aa9.31□□□□□ -0.92
HDAC6-210ENST00000441703 POLR3AO14802 1390 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-210ENST00000441703 MSL1Q68DK7 614 aa9.3□□□□□ -0.92
HDAC6-210ENST00000441703 TUBGCP6Q96RT7 1819 aa9.29□□□□□ -0.92
HDAC6-210ENST00000441703 CCDC7Q96M83 1385 aa9.29□□□□□ -0.92
HDAC6-210ENST00000441703 DIEXFQ68CQ4 756 aaKnown RBP9.29□□□□□ -0.92
HDAC6-210ENST00000441703 IGSF1Q8N6C5 1336 aa9.29□□□□□ -0.92
HDAC6-210ENST00000441703 TRPM1Q7Z4N2 1603 aa9.28□□□□□ -0.92
HDAC6-210ENST00000441703 NLRP6P59044 892 aa9.28□□□□□ -0.92
HDAC6-210ENST00000441703 FSTL1Q12841 308 aa9.28□□□□□ -0.92
HDAC6-210ENST00000441703 NMRK2Q9NPI5 230 aa9.28□□□□□ -0.92
HDAC6-210ENST00000441703 CCDC61Q9Y6R9 512 aa9.28□□□□□ -0.92
HDAC6-210ENST00000441703 PPIP5K1Q6PFW1 1433 aa9.28□□□□□ -0.92
HDAC6-210ENST00000441703 ABCC6O95255 1503 aa9.27□□□□□ -0.93
HDAC6-210ENST00000441703 CDK19Q9BWU1 502 aa9.27□□□□□ -0.93
HDAC6-210ENST00000441703 CPSF1Q10570 1443 aaKnown RBP9.26□□□□□ -0.93
HDAC6-210ENST00000441703 PLEKHG3A1L390 1219 aa9.26□□□□□ -0.93
HDAC6-210ENST00000441703 COL23A1Q86Y22 540 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-210ENST00000441703 AXIN2Q9Y2T1 843 aa9.26□□□□□ -0.93
HDAC6-210ENST00000441703 PIK3C2AO00443 1686 aa9.26□□□□□ -0.93
HDAC6-210ENST00000441703 KCNQ4P56696 695 aa9.25□□□□□ -0.93
HDAC6-210ENST00000441703 SYTL4Q96C24 671 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-210ENST00000441703 MPHOSPH9Q99550 1183 aa9.25□□□□□ -0.93
HDAC6-210ENST00000441703 SLIT3O75094 1523 aa9.25□□□□□ -0.93
HDAC6-210ENST00000441703 COL18A1P39060 1754 aa9.24□□□□□ -0.93
HDAC6-210ENST00000441703 SOX12O15370 315 aa9.24□□□□□ -0.93
HDAC6-210ENST00000441703 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
HDAC6-210ENST00000441703 CCNL1Q9UK58 526 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-210ENST00000441703 RGPD5Q99666 1765 aa9.23□□□□□ -0.93
HDAC6-210ENST00000441703 IL2RBP14784 551 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms