RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PTPRUQ92729 1446 aa14.93□□□□□ -0.02
LTBR-203ENST00000441074 NCOA3Q9Y6Q9 1424 aa14.93□□□□□ -0.02
LTBR-203ENST00000441074 FYB1O15117 783 aa14.92□□□□□ -0.02
LTBR-203ENST00000441074 CCDC27Q2M243 656 aa14.92□□□□□ -0.02
LTBR-203ENST00000441074 MFAP1P55081 439 aaKnown RBP14.91□□□□□ -0.02
LTBR-203ENST00000441074 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
LTBR-203ENST00000441074 NSD2O96028 1365 aa14.91□□□□□ -0.02
LTBR-203ENST00000441074 CD163L1Q9NR16 1453 aa14.91□□□□□ -0.02
LTBR-203ENST00000441074 SETD1AO15047 1707 aaKnown RBP14.91□□□□□ -0.02
LTBR-203ENST00000441074 ZNF335Q9H4Z2 1342 aaPredicted RBP14.91□□□□□ -0.02
LTBR-203ENST00000441074 SKOR2Q2VWA4 1001 aaPredicted RBP14.91□□□□□ -0.02
LTBR-203ENST00000441074 NUDT16Q96DE0 195 aaKnown RBP14.91□□□□□ -0.02
LTBR-203ENST00000441074 PUS7Q96PZ0 661 aaKnown RBP14.91□□□□□ -0.02
LTBR-203ENST00000441074 TERF2IPQ9NYB0 399 aa14.91□□□□□ -0.02
LTBR-203ENST00000441074 PTMSP20962 102 aa14.9□□□□□ -0.02
LTBR-203ENST00000441074 CFAP53Q96M91 514 aa14.9□□□□□ -0.02
LTBR-203ENST00000441074 CIZ1Q9ULV3 898 aaPredicted RBP14.9□□□□□ -0.02
LTBR-203ENST00000441074 ATAD2Q6PL18 1390 aa14.9□□□□□ -0.02
LTBR-203ENST00000441074 PRR36Q9H6K5 1346 aa14.9□□□□□ -0.02
LTBR-203ENST00000441074 GAS2L3Q86XJ1 694 aa14.89□□□□□ -0.03
LTBR-203ENST00000441074 SNX21Q969T3 373 aa14.89□□□□□ -0.03
LTBR-203ENST00000441074 TNNQ9UQP3 1299 aa14.89□□□□□ -0.03
LTBR-203ENST00000441074 KCNA6P17658 529 aa14.88□□□□□ -0.03
LTBR-203ENST00000441074 HDGFL2Q7Z4V5 671 aaPredicted RBP14.88□□□□□ -0.03
LTBR-203ENST00000441074 SMC5Q8IY18 1101 aa14.88□□□□□ -0.03
LTBR-203ENST00000441074 GBP4Q96PP9 640 aa14.88□□□□□ -0.03
LTBR-203ENST00000441074 DIP2AQ14689 1571 aa14.88□□□□□ -0.03
LTBR-203ENST00000441074 MVPQ14764 893 aaKnown RBP14.87□□□□□ -0.03
LTBR-203ENST00000441074 TCP11L2Q8N4U5 519 aa14.87□□□□□ -0.03
LTBR-203ENST00000441074 TNPO1Q92973 898 aaKnown RBP14.87□□□□□ -0.03
LTBR-203ENST00000441074 ADGRB2O60241 1585 aa14.87□□□□□ -0.03
LTBR-203ENST00000441074 CT47B1P0C2W7 299 aaPredicted RBP14.86□□□□□ -0.03
LTBR-203ENST00000441074 CCDC173Q0VFZ6 552 aa14.86□□□□□ -0.03
LTBR-203ENST00000441074 NME9Q86XW9 330 aa14.86□□□□□ -0.03
LTBR-203ENST00000441074 PPP1R9BQ96SB3 815 aa14.86□□□□□ -0.03
LTBR-203ENST00000441074 PIK3R4Q99570 1358 aa14.86□□□□□ -0.03
LTBR-203ENST00000441074 PPIP5K1Q6PFW1 1433 aa14.86□□□□□ -0.03
LTBR-203ENST00000441074 RBM25P49756 843 aaKnown RBP14.86□□□□□ -0.03
LTBR-203ENST00000441074 NEUROD2Q15784 382 aa14.86□□□□□ -0.03
LTBR-203ENST00000441074 KIAA1211Q6ZU35 1233 aa14.86□□□□□ -0.03
LTBR-203ENST00000441074 DLC1Q96QB1 1528 aa14.85□□□□□ -0.03
LTBR-203ENST00000441074 TERF1P54274 439 aa14.85□□□□□ -0.03
LTBR-203ENST00000441074 RRP7AQ9Y3A4 280 aaKnown RBP14.85□□□□□ -0.03
LTBR-203ENST00000441074 CCDC61Q9Y6R9 512 aa14.85□□□□□ -0.03
LTBR-203ENST00000441074 ADRA2BP18089 450 aa14.84□□□□□ -0.03
LTBR-203ENST00000441074 RAB3GAP1Q15042 981 aa14.84□□□□□ -0.03
LTBR-203ENST00000441074 OFD1O75665 1012 aa14.84□□□□□ -0.03
LTBR-203ENST00000441074 HDAC1Q13547 482 aaPredicted RBP14.84□□□□□ -0.03
LTBR-203ENST00000441074 ZSCAN30Q86W11 494 aa14.83□□□□□ -0.03
LTBR-203ENST00000441074 TECPR2O15040 1411 aa14.83□□□□□ -0.03
LTBR-203ENST00000441074 CHD2O14647 1828 aaKnown RBP14.83□□□□□ -0.04
LTBR-203ENST00000441074 CALD1Q05682 793 aaKnown RBP14.83□□□□□ -0.04
LTBR-203ENST00000441074 BCL2L13Q9BXK5 485 aa14.83□□□□□ -0.04
LTBR-203ENST00000441074 FAM135BQ49AJ0 1406 aa14.83□□□□□ -0.04
LTBR-203ENST00000441074 ZKSCAN2Q63HK3 967 aa14.82□□□□□ -0.04
LTBR-203ENST00000441074 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
LTBR-203ENST00000441074 DZIP1LQ8IYY4 767 aaKnown RBP14.82□□□□□ -0.04
LTBR-203ENST00000441074 SIRT1Q96EB6 747 aa14.82□□□□□ -0.04
LTBR-203ENST00000441074 STRCP1A6NGW2 1772 aa14.82□□□□□ -0.04
LTBR-203ENST00000441074 SOX12O15370 315 aa14.81□□□□□ -0.04
LTBR-203ENST00000441074 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.81□□□□□ -0.04
LTBR-203ENST00000441074 U2SURPO15042 1029 aaKnown RBP14.8□□□□□ -0.04
LTBR-203ENST00000441074 HSP90AB1P08238 724 aaKnown RBP14.8□□□□□ -0.04
LTBR-203ENST00000441074 U2AF1L5P0DN76 240 aaPredicted RBP14.8□□□□□ -0.04
LTBR-203ENST00000441074 U2AF1Q01081 240 aaKnown RBP eCLIP14.8□□□□□ -0.04
LTBR-203ENST00000441074 FTSJ3Q8IY81 847 aaKnown RBP14.8□□□□□ -0.04
LTBR-203ENST00000441074 IBTKQ9P2D0 1353 aaPredicted RBP14.8□□□□□ -0.04
LTBR-203ENST00000441074 ACEP12821 1306 aa14.8□□□□□ -0.04
LTBR-203ENST00000441074 NASPP49321 788 aaPredicted RBP14.8□□□□□ -0.04
LTBR-203ENST00000441074 ANP32BQ92688 251 aaKnown RBP14.8□□□□□ -0.04
LTBR-203ENST00000441074 RRS1Q15050 365 aaKnown RBP14.79□□□□□ -0.04
LTBR-203ENST00000441074 MAP7D2Q96T17 732 aa14.79□□□□□ -0.04
LTBR-203ENST00000441074 EMILIN1Q9Y6C2 1016 aa14.79□□□□□ -0.04
LTBR-203ENST00000441074 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.79□□□□□ -0.04
LTBR-203ENST00000441074 CPS1P31327 1500 aa14.78□□□□□ -0.04
LTBR-203ENST00000441074 CLEC17AQ6ZS10 378 aa14.78□□□□□ -0.04
LTBR-203ENST00000441074 NWD1Q149M9 1564 aa14.78□□□□□ -0.04
LTBR-203ENST00000441074 XRN1Q8IZH2 1706 aaKnown RBP14.78□□□□□ -0.04
LTBR-203ENST00000441074 ATP7BP35670 1465 aa14.78□□□□□ -0.04
LTBR-203ENST00000441074 CPSF1Q10570 1443 aaKnown RBP14.77□□□□□ -0.04
LTBR-203ENST00000441074 MSNP26038 577 aaKnown RBP14.77□□□□□ -0.04
LTBR-203ENST00000441074 RIPK4P57078 832 aa14.77□□□□□ -0.04
LTBR-203ENST00000441074 HS1BP3Q53T59 392 aa14.77□□□□□ -0.04
LTBR-203ENST00000441074 C14orf37Q86TY3 774 aa14.77□□□□□ -0.04
LTBR-203ENST00000441074 TMEM94Q12767 1356 aa14.77□□□□□ -0.04
LTBR-203ENST00000441074 POLKQ9UBT6 870 aa14.77□□□□□ -0.05
LTBR-203ENST00000441074 DDX19BQ9UMR2 479 aa14.77□□□□□ -0.05
LTBR-203ENST00000441074 LTBP4Q8N2S1 1624 aa14.77□□□□□ -0.05
LTBR-203ENST00000441074 GOLGA6L22H0YM25 854 aa14.76□□□□□ -0.05
LTBR-203ENST00000441074 NUTM2GQ5VZR2 741 aa14.76□□□□□ -0.05
LTBR-203ENST00000441074 IL16Q14005 1332 aa14.75□□□□□ -0.05
LTBR-203ENST00000441074 PTCH1Q13635 1447 aa14.75□□□□□ -0.05
LTBR-203ENST00000441074 LRRC7Q96NW7 1537 aa14.75□□□□□ -0.05
LTBR-203ENST00000441074 KLHL40Q2TBA0 621 aa14.75□□□□□ -0.05
LTBR-203ENST00000441074 ANKRD26Q9UPS8 1709 aa14.75□□□□□ -0.05
LTBR-203ENST00000441074 PLEKHG5O94827 1062 aa14.74□□□□□ -0.05
LTBR-203ENST00000441074 KIF2CQ99661 725 aa14.74□□□□□ -0.05
LTBR-203ENST00000441074 PRDM4Q9UKN5 801 aa14.74□□□□□ -0.05
LTBR-203ENST00000441074 NUCB1Q02818 461 aa14.74□□□□□ -0.05
LTBR-203ENST00000441074 NGDNQ8NEJ9 315 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms