RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 PPP4R2Q9NY27 417 aa28.18■■■□□ 2.1
CDKN1C-204ENST00000440480 SHPRHQ149N8 1683 aa28.18■■■□□ 2.1
CDKN1C-204ENST00000440480 LRRC59Q96AG4 307 aaKnown RBP28.18■■■□□ 2.1
CDKN1C-204ENST00000440480 RUNDC1Q96C34 613 aa28.18■■■□□ 2.1
CDKN1C-204ENST00000440480 SLIT3O75094 1523 aa28.17■■■□□ 2.1
CDKN1C-204ENST00000440480 IP6K1Q92551 441 aa28.17■■■□□ 2.1
CDKN1C-204ENST00000440480 PNNQ9H307 717 aaKnown RBP28.17■■■□□ 2.1
CDKN1C-204ENST00000440480 SALL2Q9Y467 1007 aaPredicted RBP28.17■■■□□ 2.1
CDKN1C-204ENST00000440480 FCHSD2O94868 740 aa28.15■■■□□ 2.1
CDKN1C-204ENST00000440480 ZC3H6P61129 1189 aaKnown RBP28.15■■■□□ 2.1
CDKN1C-204ENST00000440480 IRX6P78412 446 aaPredicted RBP28.15■■■□□ 2.1
CDKN1C-204ENST00000440480 RNF123Q5XPI4 1314 aa28.15■■■□□ 2.1
CDKN1C-204ENST00000440480 NFAT5O94916 1531 aa28.15■■■□□ 2.1
CDKN1C-204ENST00000440480 NHSL1Q5SYE7 1610 aa28.15■■■□□ 2.1
CDKN1C-204ENST00000440480 RTL1A6NKG5 1358 aa28.14■■■□□ 2.1
CDKN1C-204ENST00000440480 APAF1O14727 1248 aa28.14■■■□□ 2.1
CDKN1C-204ENST00000440480 PEAK1Q9H792 1746 aa28.12■■■□□ 2.09
CDKN1C-204ENST00000440480 MED1Q15648 1581 aaPredicted RBP28.12■■■□□ 2.09
CDKN1C-204ENST00000440480 HMOX1P09601 288 aa28.11■■■□□ 2.09
CDKN1C-204ENST00000440480 HAP1P54257 671 aaPredicted RBP28.11■■■□□ 2.09
CDKN1C-204ENST00000440480 PLEKHF1Q96S99 279 aa28.1■■■□□ 2.09
CDKN1C-204ENST00000440480 LTV1Q96GA3 475 aaPredicted RBP28.09■■■□□ 2.09
CDKN1C-204ENST00000440480 NEFMP07197 916 aa28.08■■■□□ 2.09
CDKN1C-204ENST00000440480 TCP11L2Q8N4U5 519 aa28.08■■■□□ 2.09
CDKN1C-204ENST00000440480 RSPH6AQ9H0K4 717 aa28.08■■■□□ 2.09
CDKN1C-204ENST00000440480 AHDC1Q5TGY3 1603 aaPredicted RBP28.08■■■□□ 2.09
CDKN1C-204ENST00000440480 NGEFQ8N5V2 710 aa28.08■■■□□ 2.09
CDKN1C-204ENST00000440480 MAPK8IP3Q9UPT6 1336 aa28.07■■■□□ 2.08
CDKN1C-204ENST00000440480 SULT6B1Q6IMI4 303 aa28.07■■■□□ 2.08
CDKN1C-204ENST00000440480 PRKAR2BP31323 418 aa28.06■■■□□ 2.08
CDKN1C-204ENST00000440480 EYA1Q99502 592 aa28.05■■■□□ 2.08
CDKN1C-204ENST00000440480 PHLPP1O60346 1717 aa28.04■■■□□ 2.08
CDKN1C-204ENST00000440480 AXIN2Q9Y2T1 843 aa28.04■■■□□ 2.08
CDKN1C-204ENST00000440480 NEUROD2Q15784 382 aa28.04■■■□□ 2.08
CDKN1C-204ENST00000440480 RCAN3Q9UKA8 241 aa28.02■■■□□ 2.08
CDKN1C-204ENST00000440480 CPDO75976 1380 aa28.02■■■□□ 2.08
CDKN1C-204ENST00000440480 KIAA0232Q92628 1395 aa28.02■■■□□ 2.08
CDKN1C-204ENST00000440480 AEBP1Q8IUX7 1158 aa28.02■■■□□ 2.08
CDKN1C-204ENST00000440480 RRP7AQ9Y3A4 280 aaKnown RBP28.02■■■□□ 2.08
CDKN1C-204ENST00000440480 LTN1O94822 1766 aa28.01■■■□□ 2.07
CDKN1C-204ENST00000440480 CHRNA2Q15822 529 aa28■■■□□ 2.07
CDKN1C-204ENST00000440480 PRDM11Q9NQV5 511 aa28■■■□□ 2.07
CDKN1C-204ENST00000440480 IGSF1Q8N6C5 1336 aa28■■■□□ 2.07
CDKN1C-204ENST00000440480 ANKRD24Q8TF21 1146 aa27.99■■■□□ 2.07
CDKN1C-204ENST00000440480 COL16A1Q07092 1604 aaPredicted RBP27.99■■■□□ 2.07
CDKN1C-204ENST00000440480 PHACTR3Q96KR7 559 aa27.99■■■□□ 2.07
CDKN1C-204ENST00000440480 PHRF1Q9P1Y6 1649 aaKnown RBP27.98■■■□□ 2.07
CDKN1C-204ENST00000440480 TMPOP42166 694 aaKnown RBP27.98■■■□□ 2.07
CDKN1C-204ENST00000440480 NCBP3Q53F19 620 aaKnown RBP27.98■■■□□ 2.07
CDKN1C-204ENST00000440480 NBPF6Q5VWK0 638 aa27.96■■■□□ 2.07
CDKN1C-204ENST00000440480 NBPF4Q96M43 638 aa27.96■■■□□ 2.07
CDKN1C-204ENST00000440480 CCDC27Q2M243 656 aa27.95■■■□□ 2.06
CDKN1C-204ENST00000440480 WWC1Q8IX03 1113 aa27.95■■■□□ 2.06
CDKN1C-204ENST00000440480 CDCA7LQ96GN5 454 aa27.95■■■□□ 2.06
CDKN1C-204ENST00000440480 KDRP35968 1356 aa27.94■■■□□ 2.06
CDKN1C-204ENST00000440480 ERBB3P21860 1342 aa27.94■■■□□ 2.06
CDKN1C-204ENST00000440480 ZNF521Q96K83 1311 aa27.94■■■□□ 2.06
CDKN1C-204ENST00000440480 RIPK4P57078 832 aa27.94■■■□□ 2.06
CDKN1C-204ENST00000440480 TSHZ2Q9NRE2 1034 aa27.94■■■□□ 2.06
CDKN1C-204ENST00000440480 RRP1P56182 461 aaKnown RBP27.93■■■□□ 2.06
CDKN1C-204ENST00000440480 GOLGA2Q08379 1002 aa27.93■■■□□ 2.06
CDKN1C-204ENST00000440480 CRYBG1Q9Y4K1 1723 aa27.93■■■□□ 2.06
CDKN1C-204ENST00000440480 NFE2L2Q16236 605 aa27.92■■■□□ 2.06
CDKN1C-204ENST00000440480 HSPA1LP34931 641 aa27.91■■■□□ 2.06
CDKN1C-204ENST00000440480 USHBP1Q8N6Y0 703 aa27.91■■■□□ 2.06
CDKN1C-204ENST00000440480 RGPD1P0DJD0 1748 aa27.91■■■□□ 2.06
CDKN1C-204ENST00000440480 CSB-PGBD3P0DP91 1061 aa27.9■■■□□ 2.06
CDKN1C-204ENST00000440480 PHF23Q9BUL5 403 aaPredicted RBP27.9■■■□□ 2.06
CDKN1C-204ENST00000440480 FAM83GA6ND36 823 aa27.9■■■□□ 2.06
CDKN1C-204ENST00000440480 NLRP2Q9NX02 1062 aa27.88■■■□□ 2.05
CDKN1C-204ENST00000440480 WDR63Q8IWG1 891 aa27.87■■■□□ 2.05
CDKN1C-204ENST00000440480 TRIM35Q9UPQ4 493 aa27.87■■■□□ 2.05
CDKN1C-204ENST00000440480 ABCC6O95255 1503 aa27.87■■■□□ 2.05
CDKN1C-204ENST00000440480 B4GALNT3Q6L9W6 998 aa27.84■■■□□ 2.05
CDKN1C-204ENST00000440480 EVA1CP58658 441 aa27.83■■■□□ 2.05
CDKN1C-204ENST00000440480 COL18A1P39060 1754 aa27.83■■■□□ 2.05
CDKN1C-204ENST00000440480 E9PSI1 815 aa27.83■■■□□ 2.05
CDKN1C-204ENST00000440480 SLFN5Q08AF3 891 aa27.83■■■□□ 2.05
CDKN1C-204ENST00000440480 FBXO41Q8TF61 875 aa27.83■■■□□ 2.05
CDKN1C-204ENST00000440480 COL22A1Q8NFW1 1626 aaPredicted RBP27.82■■■□□ 2.04
CDKN1C-204ENST00000440480 NUTM2BA6NNL0 878 aaPredicted RBP27.82■■■□□ 2.04
CDKN1C-204ENST00000440480 NUTM2EB1AL46 878 aaPredicted RBP27.82■■■□□ 2.04
CDKN1C-204ENST00000440480 LMOD3Q0VAK6 560 aa27.82■■■□□ 2.04
CDKN1C-204ENST00000440480 MTHFSDQ2M296 383 aaKnown RBP27.82■■■□□ 2.04
CDKN1C-204ENST00000440480 NUTM2AQ8IVF1 878 aaPredicted RBP27.82■■■□□ 2.04
CDKN1C-204ENST00000440480 CCDC136Q96JN2 1154 aa27.82■■■□□ 2.04
CDKN1C-204ENST00000440480 DUSP27Q5VZP5 1158 aa27.81■■■□□ 2.04
CDKN1C-204ENST00000440480 GAS2L2Q8NHY3 880 aa27.81■■■□□ 2.04
CDKN1C-204ENST00000440480 ABCA3Q99758 1704 aa27.81■■■□□ 2.04
CDKN1C-204ENST00000440480 ADAMTS2O95450 1211 aa27.81■■■□□ 2.04
CDKN1C-204ENST00000440480 JCADQ9P266 1359 aa27.8■■■□□ 2.04
CDKN1C-204ENST00000440480 SPINK5Q9NQ38 1064 aaPredicted RBP27.8■■■□□ 2.04
CDKN1C-204ENST00000440480 BTG4Q9NY30 223 aa27.8■■■□□ 2.04
CDKN1C-204ENST00000440480 CAMTA1Q9Y6Y1 1673 aa27.8■■■□□ 2.04
CDKN1C-204ENST00000440480 TOM1L2Q6ZVM7 507 aa27.79■■■□□ 2.04
CDKN1C-204ENST00000440480 WDR17Q8IZU2 1322 aa27.79■■■□□ 2.04
CDKN1C-204ENST00000440480 STRN4Q9NRL3 753 aa27.79■■■□□ 2.04
CDKN1C-204ENST00000440480 TRMT2AQ8IZ69 625 aaKnown RBP27.77■■■□□ 2.04
CDKN1C-204ENST00000440480 NCAPD2Q15021 1401 aa27.77■■■□□ 2.04
CDKN1C-204ENST00000440480 RGPD5Q99666 1765 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms