RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 COG3Q96JB2 828 aa21.78■■□□□ 1.08
UBE2F-214ENST00000440223 STRN4Q9NRL3 753 aa21.78■■□□□ 1.08
UBE2F-214ENST00000440223 COL5A2P05997 1499 aaPredicted RBP21.77■■□□□ 1.08
UBE2F-214ENST00000440223 EVA1CP58658 441 aa21.77■■□□□ 1.08
UBE2F-214ENST00000440223 NSD3Q9BZ95 1437 aa21.77■■□□□ 1.08
UBE2F-214ENST00000440223 ARHGEF25Q86VW2 580 aa21.76■■□□□ 1.07
UBE2F-214ENST00000440223 SPATA31A5Q5VU36 1347 aa21.76■■□□□ 1.07
UBE2F-214ENST00000440223 SPATA31A7Q8IWB4 1347 aa21.76■■□□□ 1.07
UBE2F-214ENST00000440223 ANKRD26Q9UPS8 1709 aa21.75■■□□□ 1.07
UBE2F-214ENST00000440223 RGPD5Q99666 1765 aa21.75■■□□□ 1.07
UBE2F-214ENST00000440223 PRKRIP1Q9H875 184 aaPredicted RBP21.75■■□□□ 1.07
UBE2F-214ENST00000440223 NPC1L1Q9UHC9 1359 aa21.74■■□□□ 1.07
UBE2F-214ENST00000440223 CCER2I3L3R5 266 aa21.74■■□□□ 1.07
UBE2F-214ENST00000440223 PER1O15534 1290 aaPredicted RBP21.74■■□□□ 1.07
UBE2F-214ENST00000440223 RALBP1Q15311 655 aa21.73■■□□□ 1.07
UBE2F-214ENST00000440223 BRWD3Q6RI45 1802 aa21.73■■□□□ 1.07
UBE2F-214ENST00000440223 SPATA31A1Q5TZJ5 1347 aa21.72■■□□□ 1.07
UBE2F-214ENST00000440223 A0A0G2JS52 829 aa21.71■■□□□ 1.07
UBE2F-214ENST00000440223 FYB1O15117 783 aa21.71■■□□□ 1.07
UBE2F-214ENST00000440223 MYT1Q01538 1121 aa21.71■■□□□ 1.07
UBE2F-214ENST00000440223 CARD14Q9BXL6 1004 aa21.71■■□□□ 1.07
UBE2F-214ENST00000440223 THSD7AQ9UPZ6 1657 aa21.71■■□□□ 1.07
UBE2F-214ENST00000440223 NSD2O96028 1365 aa21.71■■□□□ 1.07
UBE2F-214ENST00000440223 CRB1P82279 1406 aa21.71■■□□□ 1.07
UBE2F-214ENST00000440223 ONECUT3O60422 494 aaPredicted RBP21.7■■□□□ 1.06
UBE2F-214ENST00000440223 FAM98CQ17RN3 349 aaKnown RBP21.7■■□□□ 1.06
UBE2F-214ENST00000440223 GGNBP2Q9H3C7 697 aa21.7■■□□□ 1.06
UBE2F-214ENST00000440223 CGNL1Q0VF96 1302 aa21.7■■□□□ 1.06
UBE2F-214ENST00000440223 LARP1Q6PKG0 1096 aaKnown RBP21.69■■□□□ 1.06
UBE2F-214ENST00000440223 SEPT12Q8IYM1 358 aa21.69■■□□□ 1.06
UBE2F-214ENST00000440223 PARD3Q8TEW0 1356 aa21.69■■□□□ 1.06
UBE2F-214ENST00000440223 CNGB1Q14028 1251 aaPredicted RBP21.68■■□□□ 1.06
UBE2F-214ENST00000440223 WNK3Q9BYP7 1800 aa21.67■■□□□ 1.06
UBE2F-214ENST00000440223 WDR17Q8IZU2 1322 aa21.67■■□□□ 1.06
UBE2F-214ENST00000440223 CC2D1BQ5T0F9 858 aaKnown RBP21.67■■□□□ 1.06
UBE2F-214ENST00000440223 USP35Q9P2H5 1018 aa21.67■■□□□ 1.06
UBE2F-214ENST00000440223 AXIN2Q9Y2T1 843 aa21.67■■□□□ 1.06
UBE2F-214ENST00000440223 BLMP54132 1417 aaPredicted RBP21.66■■□□□ 1.06
UBE2F-214ENST00000440223 MYBBP1AQ9BQG0 1328 aaKnown RBP21.66■■□□□ 1.06
UBE2F-214ENST00000440223 AMER1Q5JTC6 1135 aaPredicted RBP21.66■■□□□ 1.06
UBE2F-214ENST00000440223 THRAP3Q9Y2W1 955 aaKnown RBP21.66■■□□□ 1.06
UBE2F-214ENST00000440223 FAM208AQ9UK61 1670 aaKnown RBP21.66■■□□□ 1.06
UBE2F-214ENST00000440223 CSB-PGBD3P0DP91 1061 aa21.65■■□□□ 1.06
UBE2F-214ENST00000440223 BARGINQ6ZT62 677 aa21.65■■□□□ 1.06
UBE2F-214ENST00000440223 TOM1L2Q6ZVM7 507 aa21.65■■□□□ 1.06
UBE2F-214ENST00000440223 TCP11L2Q8N4U5 519 aa21.65■■□□□ 1.06
UBE2F-214ENST00000440223 RTL1A6NKG5 1358 aa21.64■■□□□ 1.06
UBE2F-214ENST00000440223 PARP4Q9UKK3 1724 aaKnown RBP21.63■■□□□ 1.05
UBE2F-214ENST00000440223 MAP3K19Q56UN5 1328 aa21.62■■□□□ 1.05
UBE2F-214ENST00000440223 KRT27Q7Z3Y8 459 aa21.62■■□□□ 1.05
UBE2F-214ENST00000440223 ERBB3P21860 1342 aa21.61■■□□□ 1.05
UBE2F-214ENST00000440223 AMPHP49418 695 aa21.61■■□□□ 1.05
UBE2F-214ENST00000440223 IP6K1Q92551 441 aa21.61■■□□□ 1.05
UBE2F-214ENST00000440223 UPF1Q92900 1129 aaKnown RBP eCLIP21.61■■□□□ 1.05
UBE2F-214ENST00000440223 ANKRD24Q8TF21 1146 aa21.59■■□□□ 1.05
UBE2F-214ENST00000440223 CARD10Q9BWT7 1032 aa21.59■■□□□ 1.05
UBE2F-214ENST00000440223 KIF24Q5T7B8 1368 aa21.59■■□□□ 1.05
UBE2F-214ENST00000440223 HOXC9P31274 260 aa21.58■■□□□ 1.05
UBE2F-214ENST00000440223 RRS1Q15050 365 aaKnown RBP21.58■■□□□ 1.05
UBE2F-214ENST00000440223 MORC1Q86VD1 984 aa21.58■■□□□ 1.05
UBE2F-214ENST00000440223 LRRC37A3O60309 1634 aa21.58■■□□□ 1.04
UBE2F-214ENST00000440223 MAP2P11137 1827 aaKnown RBP21.57■■□□□ 1.04
UBE2F-214ENST00000440223 MRS2Q9HD23 443 aa21.57■■□□□ 1.04
UBE2F-214ENST00000440223 PEAK1Q9H792 1746 aa21.57■■□□□ 1.04
UBE2F-214ENST00000440223 SMG6Q86US8 1419 aaKnown RBP21.56■■□□□ 1.04
UBE2F-214ENST00000440223 FBLN1P23142 703 aa21.56■■□□□ 1.04
UBE2F-214ENST00000440223 CDCA7Q9BWT1 371 aaPredicted RBP21.56■■□□□ 1.04
UBE2F-214ENST00000440223 FLT4P35916 1363 aa21.56■■□□□ 1.04
UBE2F-214ENST00000440223 NLRP2Q9NX02 1062 aa21.55■■□□□ 1.04
UBE2F-214ENST00000440223 EP400Q96L91 3159 aa21.54■■□□□ 1.04
UBE2F-214ENST00000440223 PDE3BQ13370 1112 aa21.53■■□□□ 1.04
UBE2F-214ENST00000440223 CCDC125Q86Z20 511 aa21.52■■□□□ 1.04
UBE2F-214ENST00000440223 LTV1Q96GA3 475 aaPredicted RBP21.52■■□□□ 1.04
UBE2F-214ENST00000440223 DISP2A7MBM2 1401 aa21.52■■□□□ 1.04
UBE2F-214ENST00000440223 RGPD2P0DJD1 1756 aa21.51■■□□□ 1.03
UBE2F-214ENST00000440223 INSRP06213 1382 aa21.51■■□□□ 1.03
UBE2F-214ENST00000440223 RGPD1P0DJD0 1748 aa21.51■■□□□ 1.03
UBE2F-214ENST00000440223 PPP2R1AP30153 589 aa21.5■■□□□ 1.03
UBE2F-214ENST00000440223 DDB1Q16531 1140 aa21.5■■□□□ 1.03
UBE2F-214ENST00000440223 EMILIN1Q9Y6C2 1016 aa21.5■■□□□ 1.03
UBE2F-214ENST00000440223 TNS2Q63HR2 1409 aa21.48■■□□□ 1.03
UBE2F-214ENST00000440223 PPM1GO15355 546 aaPredicted RBP21.48■■□□□ 1.03
UBE2F-214ENST00000440223 TNNT2P45379 298 aaPredicted RBP21.48■■□□□ 1.03
UBE2F-214ENST00000440223 IL2RBP14784 551 aa21.47■■□□□ 1.03
UBE2F-214ENST00000440223 SF3B2Q13435 895 aaKnown RBP21.47■■□□□ 1.03
UBE2F-214ENST00000440223 FAM196AQ6ZSG2 479 aa21.47■■□□□ 1.03
UBE2F-214ENST00000440223 HSP90AB2PQ58FF8 381 aa21.46■■□□□ 1.03
UBE2F-214ENST00000440223 FAM182BQ5T319 152 aa21.46■■□□□ 1.03
UBE2F-214ENST00000440223 OVOS2A0A0G2JMS6 1433 aa21.46■■□□□ 1.03
UBE2F-214ENST00000440223 POLKQ9UBT6 870 aa21.45■■□□□ 1.02
UBE2F-214ENST00000440223 TNS1Q9HBL0 1735 aaKnown RBP21.44■■□□□ 1.02
UBE2F-214ENST00000440223 EXOC5O00471 708 aa21.44■■□□□ 1.02
UBE2F-214ENST00000440223 CFAP53Q96M91 514 aa21.43■■□□□ 1.02
UBE2F-214ENST00000440223 CCDC184Q52MB2 194 aa21.42■■□□□ 1.02
UBE2F-214ENST00000440223 YTHDC1Q96MU7 727 aaKnown RBP21.41■■□□□ 1.02
UBE2F-214ENST00000440223 SBF2Q86WG5 1849 aa21.41■■□□□ 1.02
UBE2F-214ENST00000440223 NBPF6Q5VWK0 638 aa21.4■■□□□ 1.02
UBE2F-214ENST00000440223 NBPF4Q96M43 638 aa21.4■■□□□ 1.02
UBE2F-214ENST00000440223 FAM9BQ8IZU0 186 aa21.39■■□□□ 1.01
UBE2F-214ENST00000440223 BAG6P46379 1132 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms