RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 TRPC5Q9UL62 973 aaPredicted RBP19.73■□□□□ 0.75
TNFRSF1A-204ENST00000440083 GLI3P10071 1580 aa19.72■□□□□ 0.75
TNFRSF1A-204ENST00000440083 STRN4Q9NRL3 753 aa19.72■□□□□ 0.75
TNFRSF1A-204ENST00000440083 AATKQ6ZMQ8 1374 aa19.71■□□□□ 0.75
TNFRSF1A-204ENST00000440083 RGPD5Q99666 1765 aa19.71■□□□□ 0.75
TNFRSF1A-204ENST00000440083 ANKRD26Q9UPS8 1709 aa19.71■□□□□ 0.75
TNFRSF1A-204ENST00000440083 AXIN2Q9Y2T1 843 aa19.7■□□□□ 0.74
TNFRSF1A-204ENST00000440083 COL5A2P05997 1499 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF1A-204ENST00000440083 RXRBP28702 533 aa19.69■□□□□ 0.74
TNFRSF1A-204ENST00000440083 VPS72Q15906 364 aa19.69■□□□□ 0.74
TNFRSF1A-204ENST00000440083 CCDC9Q9Y3X0 531 aaKnown RBP19.69■□□□□ 0.74
TNFRSF1A-204ENST00000440083 RRS1Q15050 365 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-204ENST00000440083 KNSTRNQ9Y448 316 aa19.68■□□□□ 0.74
TNFRSF1A-204ENST00000440083 MAP3K19Q56UN5 1328 aa19.68■□□□□ 0.74
TNFRSF1A-204ENST00000440083 RBM6P78332 1123 aaKnown RBP19.67■□□□□ 0.74
TNFRSF1A-204ENST00000440083 AMER1Q5JTC6 1135 aaPredicted RBP19.67■□□□□ 0.74
TNFRSF1A-204ENST00000440083 LARP1Q6PKG0 1096 aaKnown RBP19.67■□□□□ 0.74
TNFRSF1A-204ENST00000440083 GJD4Q96KN9 370 aaPredicted RBP19.67■□□□□ 0.74
TNFRSF1A-204ENST00000440083 RGS12O14924 1447 aa19.67■□□□□ 0.74
TNFRSF1A-204ENST00000440083 PEAK1Q9H792 1746 aa19.66■□□□□ 0.74
TNFRSF1A-204ENST00000440083 PER1O15534 1290 aaPredicted RBP19.66■□□□□ 0.74
TNFRSF1A-204ENST00000440083 TNNT2P45379 298 aaPredicted RBP19.66■□□□□ 0.74
TNFRSF1A-204ENST00000440083 ABCC6O95255 1503 aa19.66■□□□□ 0.74
TNFRSF1A-204ENST00000440083 EVA1CP58658 441 aa19.65■□□□□ 0.74
TNFRSF1A-204ENST00000440083 CNGB1Q14028 1251 aaPredicted RBP19.65■□□□□ 0.74
TNFRSF1A-204ENST00000440083 MRS2Q9HD23 443 aa19.64■□□□□ 0.73
TNFRSF1A-204ENST00000440083 SPATA31A5Q5VU36 1347 aa19.64■□□□□ 0.73
TNFRSF1A-204ENST00000440083 SPATA31A7Q8IWB4 1347 aa19.64■□□□□ 0.73
TNFRSF1A-204ENST00000440083 NSD2O96028 1365 aa19.64■□□□□ 0.73
TNFRSF1A-204ENST00000440083 RALBP1Q15311 655 aa19.63■□□□□ 0.73
TNFRSF1A-204ENST00000440083 CC2D1BQ5T0F9 858 aaKnown RBP19.62■□□□□ 0.73
TNFRSF1A-204ENST00000440083 USP35Q9P2H5 1018 aa19.62■□□□□ 0.73
TNFRSF1A-204ENST00000440083 EMILIN1Q9Y6C2 1016 aa19.62■□□□□ 0.73
TNFRSF1A-204ENST00000440083 CDK12Q9NYV4 1490 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF1A-204ENST00000440083 SPATA31A1Q5TZJ5 1347 aa19.61■□□□□ 0.73
TNFRSF1A-204ENST00000440083 HOXC9P31274 260 aa19.61■□□□□ 0.73
TNFRSF1A-204ENST00000440083 AMPHP49418 695 aa19.61■□□□□ 0.73
TNFRSF1A-204ENST00000440083 MORC1Q86VD1 984 aa19.61■□□□□ 0.73
TNFRSF1A-204ENST00000440083 IP6K1Q92551 441 aa19.61■□□□□ 0.73
TNFRSF1A-204ENST00000440083 CSB-PGBD3P0DP91 1061 aa19.6■□□□□ 0.73
TNFRSF1A-204ENST00000440083 FAM98CQ17RN3 349 aaKnown RBP19.6■□□□□ 0.73
TNFRSF1A-204ENST00000440083 LTV1Q96GA3 475 aaPredicted RBP19.6■□□□□ 0.73
TNFRSF1A-204ENST00000440083 RTL1A6NKG5 1358 aa19.59■□□□□ 0.73
TNFRSF1A-204ENST00000440083 WDR17Q8IZU2 1322 aa19.59■□□□□ 0.73
TNFRSF1A-204ENST00000440083 MYBBP1AQ9BQG0 1328 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-204ENST00000440083 ANKRD24Q8TF21 1146 aa19.59■□□□□ 0.73
TNFRSF1A-204ENST00000440083 MAP2P11137 1827 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-204ENST00000440083 BLMP54132 1417 aaPredicted RBP19.59■□□□□ 0.73
TNFRSF1A-204ENST00000440083 CRB1P82279 1406 aa19.59■□□□□ 0.73
TNFRSF1A-204ENST00000440083 ERBB3P21860 1342 aa19.58■□□□□ 0.73
TNFRSF1A-204ENST00000440083 TOM1L2Q6ZVM7 507 aa19.58■□□□□ 0.72
TNFRSF1A-204ENST00000440083 PPM1GO15355 546 aaPredicted RBP19.57■□□□□ 0.72
TNFRSF1A-204ENST00000440083 POLKQ9UBT6 870 aa19.57■□□□□ 0.72
TNFRSF1A-204ENST00000440083 PARD3Q8TEW0 1356 aa19.57■□□□□ 0.72
TNFRSF1A-204ENST00000440083 THSD7AQ9UPZ6 1657 aa19.56■□□□□ 0.72
TNFRSF1A-204ENST00000440083 HSP90AB2PQ58FF8 381 aa19.56■□□□□ 0.72
TNFRSF1A-204ENST00000440083 SEPT12Q8IYM1 358 aa19.56■□□□□ 0.72
TNFRSF1A-204ENST00000440083 FLT4P35916 1363 aa19.56■□□□□ 0.72
TNFRSF1A-204ENST00000440083 BRWD3Q6RI45 1802 aa19.55■□□□□ 0.72
TNFRSF1A-204ENST00000440083 RGPD2P0DJD1 1756 aa19.55■□□□□ 0.72
TNFRSF1A-204ENST00000440083 A0A0G2JS52 829 aa19.55■□□□□ 0.72
TNFRSF1A-204ENST00000440083 MYT1Q01538 1121 aa19.55■□□□□ 0.72
TNFRSF1A-204ENST00000440083 NPC1L1Q9UHC9 1359 aa19.55■□□□□ 0.72
TNFRSF1A-204ENST00000440083 WNK3Q9BYP7 1800 aa19.54■□□□□ 0.72
TNFRSF1A-204ENST00000440083 TCP11L2Q8N4U5 519 aa19.54■□□□□ 0.72
TNFRSF1A-204ENST00000440083 NLRP2Q9NX02 1062 aa19.54■□□□□ 0.72
TNFRSF1A-204ENST00000440083 SMG6Q86US8 1419 aaKnown RBP19.53■□□□□ 0.72
TNFRSF1A-204ENST00000440083 CCDC184Q52MB2 194 aa19.53■□□□□ 0.72
TNFRSF1A-204ENST00000440083 CARD10Q9BWT7 1032 aa19.53■□□□□ 0.72
TNFRSF1A-204ENST00000440083 INSRP06213 1382 aa19.53■□□□□ 0.72
TNFRSF1A-204ENST00000440083 ONECUT3O60422 494 aaPredicted RBP19.52■□□□□ 0.72
TNFRSF1A-204ENST00000440083 KIF24Q5T7B8 1368 aa19.52■□□□□ 0.72
TNFRSF1A-204ENST00000440083 FAM208AQ9UK61 1670 aaKnown RBP19.52■□□□□ 0.71
TNFRSF1A-204ENST00000440083 BARGINQ6ZT62 677 aa19.51■□□□□ 0.71
TNFRSF1A-204ENST00000440083 FAM9BQ8IZU0 186 aa19.51■□□□□ 0.71
TNFRSF1A-204ENST00000440083 HNRNPUQ00839 825 aaKnown RBP eCLIP19.5■□□□□ 0.71
TNFRSF1A-204ENST00000440083 USHBP1Q8N6Y0 703 aa19.49■□□□□ 0.71
TNFRSF1A-204ENST00000440083 LRRC37A3O60309 1634 aa19.49■□□□□ 0.71
TNFRSF1A-204ENST00000440083 DISP2A7MBM2 1401 aa19.49■□□□□ 0.71
TNFRSF1A-204ENST00000440083 THRAP3Q9Y2W1 955 aaKnown RBP19.48■□□□□ 0.71
TNFRSF1A-204ENST00000440083 PARP4Q9UKK3 1724 aaKnown RBP19.48■□□□□ 0.71
TNFRSF1A-204ENST00000440083 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
TNFRSF1A-204ENST00000440083 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
TNFRSF1A-204ENST00000440083 EIF4A2Q14240 407 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1A-204ENST00000440083 FAM182BQ5T319 152 aa19.46■□□□□ 0.71
TNFRSF1A-204ENST00000440083 MTHFSP49914 203 aa19.45■□□□□ 0.7
TNFRSF1A-204ENST00000440083 KRT27Q7Z3Y8 459 aa19.45■□□□□ 0.7
TNFRSF1A-204ENST00000440083 GTF3C3Q9Y5Q9 886 aa19.44■□□□□ 0.7
TNFRSF1A-204ENST00000440083 MEGF6O75095 1541 aa19.43■□□□□ 0.7
TNFRSF1A-204ENST00000440083 COL3A1P02461 1466 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF1A-204ENST00000440083 IL2RBP14784 551 aa19.41■□□□□ 0.7
TNFRSF1A-204ENST00000440083 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
TNFRSF1A-204ENST00000440083 EYA1Q99502 592 aa19.41■□□□□ 0.7
TNFRSF1A-204ENST00000440083 NCAPD2Q15021 1401 aa19.4■□□□□ 0.7
TNFRSF1A-204ENST00000440083 TNS2Q63HR2 1409 aa19.4■□□□□ 0.7
TNFRSF1A-204ENST00000440083 DDB1Q16531 1140 aa19.39■□□□□ 0.69
TNFRSF1A-204ENST00000440083 CDCA7Q9BWT1 371 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF1A-204ENST00000440083 RGPD1P0DJD0 1748 aa19.38■□□□□ 0.69
TNFRSF1A-204ENST00000440083 IL13P35225 146 aa19.38■□□□□ 0.69
TNFRSF1A-204ENST00000440083 PDE3BQ13370 1112 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms