RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 RABEP1Q15276 862 aa13.81□□□□□ -0.2
CCBE1-202ENST00000439986 ZFYVE27Q5T4F4 411 aa13.81□□□□□ -0.2
CCBE1-202ENST00000439986 AFAP1Q8N556 730 aa13.81□□□□□ -0.2
CCBE1-202ENST00000439986 GCC1Q96CN9 775 aa13.81□□□□□ -0.2
CCBE1-202ENST00000439986 PLEKHH2Q8IVE3 1493 aa13.81□□□□□ -0.2
CCBE1-202ENST00000439986 FAM160A1Q05DH4 1040 aa13.81□□□□□ -0.2
CCBE1-202ENST00000439986 ARMCX6Q7L4S7 300 aa13.8□□□□□ -0.2
CCBE1-202ENST00000439986 K7ELQ4 463 aaPredicted RBP13.8□□□□□ -0.2
CCBE1-202ENST00000439986 TRDNQ13061 729 aa13.8□□□□□ -0.2
CCBE1-202ENST00000439986 NAP1L4Q99733 375 aaKnown RBP13.8□□□□□ -0.2
CCBE1-202ENST00000439986 LIG1P18858 919 aa13.8□□□□□ -0.2
CCBE1-202ENST00000439986 G3BP1Q13283 466 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCBE1-202ENST00000439986 WASHC4Q2M389 1173 aa13.8□□□□□ -0.2
CCBE1-202ENST00000439986 CCDC47Q96A33 483 aaKnown RBP13.8□□□□□ -0.2
CCBE1-202ENST00000439986 ARHGAP5Q13017 1502 aa13.8□□□□□ -0.2
CCBE1-202ENST00000439986 CT47A1Q5JQC4 288 aaPredicted RBP13.8□□□□□ -0.2
CCBE1-202ENST00000439986 BIVM-ERCC5R4GMW8 1640 aa13.8□□□□□ -0.2
CCBE1-202ENST00000439986 ZKSCAN1P17029 563 aaPredicted RBP13.8□□□□□ -0.2
CCBE1-202ENST00000439986 RUFY2Q8WXA3 655 aa13.79□□□□□ -0.2
CCBE1-202ENST00000439986 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCBE1-202ENST00000439986 TBC1D2Q9BYX2 928 aa13.79□□□□□ -0.2
CCBE1-202ENST00000439986 DNMBPQ6XZF7 1577 aa13.79□□□□□ -0.2
CCBE1-202ENST00000439986 IPO7O95373 1038 aaKnown RBP13.79□□□□□ -0.2
CCBE1-202ENST00000439986 CT47B1P0C2W7 299 aaPredicted RBP13.79□□□□□ -0.2
CCBE1-202ENST00000439986 IKQ13123 557 aaPredicted RBP13.79□□□□□ -0.2
CCBE1-202ENST00000439986 HDAC1Q13547 482 aaPredicted RBP13.79□□□□□ -0.2
CCBE1-202ENST00000439986 TEX2Q8IWB9 1127 aa13.79□□□□□ -0.2
CCBE1-202ENST00000439986 CGNQ9P2M7 1197 aaKnown RBP13.79□□□□□ -0.2
CCBE1-202ENST00000439986 LRPPRCP42704 1394 aaKnown RBP13.78□□□□□ -0.2
CCBE1-202ENST00000439986 MBD3O95983 291 aa13.78□□□□□ -0.2
CCBE1-202ENST00000439986 PRKAR2BP31323 418 aa13.78□□□□□ -0.2
CCBE1-202ENST00000439986 TSPYL4Q9UJ04 414 aa13.78□□□□□ -0.2
CCBE1-202ENST00000439986 NKTRP30414 1462 aaKnown RBP13.78□□□□□ -0.2
CCBE1-202ENST00000439986 NEK4P51957 841 aa13.78□□□□□ -0.2
CCBE1-202ENST00000439986 CPLX2Q6PUV4 134 aaKnown RBP13.78□□□□□ -0.2
CCBE1-202ENST00000439986 CERS3Q8IU89 383 aa13.78□□□□□ -0.2
CCBE1-202ENST00000439986 CHD1LQ86WJ1 897 aa13.78□□□□□ -0.2
CCBE1-202ENST00000439986 ANKRD20A12PQ8NF67 263 aa13.78□□□□□ -0.2
CCBE1-202ENST00000439986 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
CCBE1-202ENST00000439986 PIK3R5Q8WYR1 880 aa13.78□□□□□ -0.2
CCBE1-202ENST00000439986 BTN2A1Q7KYR7 527 aa13.77□□□□□ -0.2
CCBE1-202ENST00000439986 SMC3Q9UQE7 1217 aa13.77□□□□□ -0.2
CCBE1-202ENST00000439986 PEG3Q9GZU2 1588 aa13.77□□□□□ -0.2
CCBE1-202ENST00000439986 RARSP54136 660 aaKnown RBP13.77□□□□□ -0.2
CCBE1-202ENST00000439986 ODF2Q5BJF6 829 aa13.77□□□□□ -0.21
CCBE1-202ENST00000439986 SASS6Q6UVJ0 657 aa13.77□□□□□ -0.21
CCBE1-202ENST00000439986 SEPT14Q6ZU15 432 aa13.77□□□□□ -0.21
CCBE1-202ENST00000439986 EPS15P42566 896 aa13.77□□□□□ -0.21
CCBE1-202ENST00000439986 HSP90AB2PQ58FF8 381 aa13.76□□□□□ -0.21
CCBE1-202ENST00000439986 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
CCBE1-202ENST00000439986 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
CCBE1-202ENST00000439986 H0YHG0 523 aa13.76□□□□□ -0.21
CCBE1-202ENST00000439986 SARNPP82979 210 aaKnown RBP13.76□□□□□ -0.21
CCBE1-202ENST00000439986 CAMSAP2Q08AD1 1489 aa13.76□□□□□ -0.21
CCBE1-202ENST00000439986 TEX35Q5T0J7 233 aa13.76□□□□□ -0.21
CCBE1-202ENST00000439986 LRRFIP1Q32MZ4 808 aaKnown RBP13.76□□□□□ -0.21
CCBE1-202ENST00000439986 BICRAQ9NZM4 1560 aa13.75□□□□□ -0.21
CCBE1-202ENST00000439986 IGHDP01880 384 aa13.75□□□□□ -0.21
CCBE1-202ENST00000439986 TWISTNBQ3B726 338 aaPredicted RBP13.75□□□□□ -0.21
CCBE1-202ENST00000439986 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
CCBE1-202ENST00000439986 MNS1Q8NEH6 495 aa13.75□□□□□ -0.21
CCBE1-202ENST00000439986 TCHPQ9BT92 498 aa13.75□□□□□ -0.21
CCBE1-202ENST00000439986 HOOK1Q9UJC3 728 aaKnown RBP13.74□□□□□ -0.21
CCBE1-202ENST00000439986 DDX58O95786 925 aaKnown RBP13.74□□□□□ -0.21
CCBE1-202ENST00000439986 CYB5RLQ6IPT4 315 aa13.74□□□□□ -0.21
CCBE1-202ENST00000439986 TNNT1P13805 278 aa13.74□□□□□ -0.21
CCBE1-202ENST00000439986 RRP12Q5JTH9 1297 aaKnown RBP13.74□□□□□ -0.21
CCBE1-202ENST00000439986 ATP2B1P20020 1258 aa13.74□□□□□ -0.21
CCBE1-202ENST00000439986 TMEM57Q8N5G2 664 aa13.73□□□□□ -0.21
CCBE1-202ENST00000439986 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
CCBE1-202ENST00000439986 HSP90AB3PQ58FF7 597 aa13.73□□□□□ -0.21
CCBE1-202ENST00000439986 CAGE1Q8TC20 777 aa13.72□□□□□ -0.21
CCBE1-202ENST00000439986 C8orf34Q49A92 452 aa13.72□□□□□ -0.21
CCBE1-202ENST00000439986 RNF20Q5VTR2 975 aa13.72□□□□□ -0.21
CCBE1-202ENST00000439986 ZNHIT6Q9NWK9 470 aaKnown RBP13.72□□□□□ -0.21
CCBE1-202ENST00000439986 ANKRD62A6NC57 917 aa13.72□□□□□ -0.21
CCBE1-202ENST00000439986 DISP3Q9P2K9 1392 aa13.72□□□□□ -0.21
CCBE1-202ENST00000439986 MCM2P49736 904 aa13.71□□□□□ -0.21
CCBE1-202ENST00000439986 CEBPZQ03701 1054 aaKnown RBP13.71□□□□□ -0.21
CCBE1-202ENST00000439986 BRPF1P55201 1214 aaPredicted RBP13.71□□□□□ -0.21
CCBE1-202ENST00000439986 ZSCAN30Q86W11 494 aa13.71□□□□□ -0.21
CCBE1-202ENST00000439986 BANK1Q8NDB2 785 aa13.71□□□□□ -0.21
CCBE1-202ENST00000439986 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
CCBE1-202ENST00000439986 FRMD4BQ9Y2L6 1034 aa13.71□□□□□ -0.21
CCBE1-202ENST00000439986 CUL7Q14999 1698 aa13.71□□□□□ -0.21
CCBE1-202ENST00000439986 CHMP4CQ96CF2 233 aa13.71□□□□□ -0.21
CCBE1-202ENST00000439986 RALYLQ86SE5 291 aaKnown RBP13.71□□□□□ -0.22
CCBE1-202ENST00000439986 GIMAP7Q8NHV1 300 aa13.71□□□□□ -0.22
CCBE1-202ENST00000439986 SAFBQ15424 915 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCBE1-202ENST00000439986 TBC1D32Q96NH3 1257 aa13.7□□□□□ -0.22
CCBE1-202ENST00000439986 NSD3Q9BZ95 1437 aa13.7□□□□□ -0.22
CCBE1-202ENST00000439986 IQGAP2Q13576 1575 aa13.7□□□□□ -0.22
CCBE1-202ENST00000439986 SWAP70Q9UH65 585 aa13.7□□□□□ -0.22
CCBE1-202ENST00000439986 MAP4K4O95819 1239 aaPredicted RBP13.7□□□□□ -0.22
CCBE1-202ENST00000439986 MPNDQ8N594 471 aa13.7□□□□□ -0.22
CCBE1-202ENST00000439986 SSH1Q8WYL5 1049 aa13.7□□□□□ -0.22
CCBE1-202ENST00000439986 ATP2B2Q01814 1243 aa13.69□□□□□ -0.22
CCBE1-202ENST00000439986 CCDC73Q6ZRK6 1079 aa13.69□□□□□ -0.22
CCBE1-202ENST00000439986 PRPF38AQ8NAV1 312 aaKnown RBP13.69□□□□□ -0.22
CCBE1-202ENST00000439986 RBM42Q9BTD8 480 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms