RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 TRPC5Q9UL62 973 aaPredicted RBP23.16■■□□□ 1.3
TARDBP-203ENST00000439080 WNK3Q9BYP7 1800 aa23.16■■□□□ 1.3
TARDBP-203ENST00000439080 QTRT2Q9H974 415 aaKnown RBP23.14■■□□□ 1.3
TARDBP-203ENST00000439080 RTL1A6NKG5 1358 aa23.14■■□□□ 1.29
TARDBP-203ENST00000439080 MAP3K19Q56UN5 1328 aa23.14■■□□□ 1.29
TARDBP-203ENST00000439080 FBLN1P23142 703 aa23.14■■□□□ 1.29
TARDBP-203ENST00000439080 BLMP54132 1417 aaPredicted RBP23.13■■□□□ 1.29
TARDBP-203ENST00000439080 RRS1Q15050 365 aaKnown RBP23.13■■□□□ 1.29
TARDBP-203ENST00000439080 STRN4Q9NRL3 753 aa23.13■■□□□ 1.29
TARDBP-203ENST00000439080 NPC1L1Q9UHC9 1359 aa23.12■■□□□ 1.29
TARDBP-203ENST00000439080 VPS72Q15906 364 aa23.12■■□□□ 1.29
TARDBP-203ENST00000439080 AXIN2Q9Y2T1 843 aa23.12■■□□□ 1.29
TARDBP-203ENST00000439080 RGPD2P0DJD1 1756 aa23.11■■□□□ 1.29
TARDBP-203ENST00000439080 CDK12Q9NYV4 1490 aaPredicted RBP23.09■■□□□ 1.29
TARDBP-203ENST00000439080 SMG6Q86US8 1419 aaKnown RBP23.09■■□□□ 1.29
TARDBP-203ENST00000439080 RXRBP28702 533 aa23.09■■□□□ 1.29
TARDBP-203ENST00000439080 TNNT2P45379 298 aaPredicted RBP23.09■■□□□ 1.29
TARDBP-203ENST00000439080 RBM6P78332 1123 aaKnown RBP23.09■■□□□ 1.29
TARDBP-203ENST00000439080 CC2D1BQ5T0F9 858 aaKnown RBP23.09■■□□□ 1.29
TARDBP-203ENST00000439080 MORC1Q86VD1 984 aa23.09■■□□□ 1.29
TARDBP-203ENST00000439080 CCDC9Q9Y3X0 531 aaKnown RBP23.09■■□□□ 1.29
TARDBP-203ENST00000439080 RGS12O14924 1447 aa23.08■■□□□ 1.29
TARDBP-203ENST00000439080 CRB1P82279 1406 aa23.08■■□□□ 1.29
TARDBP-203ENST00000439080 THSD7AQ9UPZ6 1657 aa23.08■■□□□ 1.29
TARDBP-203ENST00000439080 EVA1CP58658 441 aa23.08■■□□□ 1.29
TARDBP-203ENST00000439080 GJD4Q96KN9 370 aaPredicted RBP23.08■■□□□ 1.29
TARDBP-203ENST00000439080 FLT4P35916 1363 aa23.08■■□□□ 1.28
TARDBP-203ENST00000439080 KIF24Q5T7B8 1368 aa23.08■■□□□ 1.28
TARDBP-203ENST00000439080 HOXC9P31274 260 aa23.07■■□□□ 1.28
TARDBP-203ENST00000439080 AMPHP49418 695 aa23.07■■□□□ 1.28
TARDBP-203ENST00000439080 LARP1Q6PKG0 1096 aaKnown RBP23.07■■□□□ 1.28
TARDBP-203ENST00000439080 ERBB3P21860 1342 aa23.07■■□□□ 1.28
TARDBP-203ENST00000439080 SPATA31A5Q5VU36 1347 aa23.07■■□□□ 1.28
TARDBP-203ENST00000439080 SPATA31A7Q8IWB4 1347 aa23.07■■□□□ 1.28
TARDBP-203ENST00000439080 WDR17Q8IZU2 1322 aa23.07■■□□□ 1.28
TARDBP-203ENST00000439080 BRWD3Q6RI45 1802 aa23.06■■□□□ 1.28
TARDBP-203ENST00000439080 ZNF316A6NFI3 1004 aaPredicted RBP23.06■■□□□ 1.28
TARDBP-203ENST00000439080 DDX10Q13206 875 aaKnown RBP23.06■■□□□ 1.28
TARDBP-203ENST00000439080 IP6K1Q92551 441 aa23.06■■□□□ 1.28
TARDBP-203ENST00000439080 EMILIN1Q9Y6C2 1016 aa23.06■■□□□ 1.28
TARDBP-203ENST00000439080 CNGB1Q14028 1251 aaPredicted RBP23.04■■□□□ 1.28
TARDBP-203ENST00000439080 SPATA31A1Q5TZJ5 1347 aa23.04■■□□□ 1.28
TARDBP-203ENST00000439080 ILDR2Q71H61 639 aa23.03■■□□□ 1.28
TARDBP-203ENST00000439080 PARP4Q9UKK3 1724 aaKnown RBP23.03■■□□□ 1.28
TARDBP-203ENST00000439080 CSB-PGBD3P0DP91 1061 aa23.02■■□□□ 1.28
TARDBP-203ENST00000439080 ANKRD24Q8TF21 1146 aa23.02■■□□□ 1.28
TARDBP-203ENST00000439080 INSRP06213 1382 aa23.02■■□□□ 1.28
TARDBP-203ENST00000439080 TOM1L2Q6ZVM7 507 aa23.01■■□□□ 1.27
TARDBP-203ENST00000439080 USP35Q9P2H5 1018 aa23.01■■□□□ 1.27
TARDBP-203ENST00000439080 POLKQ9UBT6 870 aa23.01■■□□□ 1.27
TARDBP-203ENST00000439080 LRRC37A3O60309 1634 aa23.01■■□□□ 1.27
TARDBP-203ENST00000439080 PPM1GO15355 546 aaPredicted RBP23.01■■□□□ 1.27
TARDBP-203ENST00000439080 LTV1Q96GA3 475 aaPredicted RBP23■■□□□ 1.27
TARDBP-203ENST00000439080 HSP90AB2PQ58FF8 381 aa22.99■■□□□ 1.27
TARDBP-203ENST00000439080 FAM98CQ17RN3 349 aaKnown RBP22.98■■□□□ 1.27
TARDBP-203ENST00000439080 TCP11L2Q8N4U5 519 aa22.97■■□□□ 1.27
TARDBP-203ENST00000439080 EP400Q96L91 3159 aa22.96■■□□□ 1.27
TARDBP-203ENST00000439080 CARD10Q9BWT7 1032 aa22.95■■□□□ 1.26
TARDBP-203ENST00000439080 NLRP2Q9NX02 1062 aa22.95■■□□□ 1.26
TARDBP-203ENST00000439080 THRAP3Q9Y2W1 955 aaKnown RBP22.95■■□□□ 1.26
TARDBP-203ENST00000439080 PARD3Q8TEW0 1356 aa22.95■■□□□ 1.26
TARDBP-203ENST00000439080 A0A0G2JS52 829 aa22.94■■□□□ 1.26
TARDBP-203ENST00000439080 MYT1Q01538 1121 aa22.94■■□□□ 1.26
TARDBP-203ENST00000439080 BARGINQ6ZT62 677 aa22.94■■□□□ 1.26
TARDBP-203ENST00000439080 RGPD1P0DJD0 1748 aa22.94■■□□□ 1.26
TARDBP-203ENST00000439080 DISP2A7MBM2 1401 aa22.93■■□□□ 1.26
TARDBP-203ENST00000439080 ONECUT3O60422 494 aaPredicted RBP22.92■■□□□ 1.26
TARDBP-203ENST00000439080 SEPT12Q8IYM1 358 aa22.92■■□□□ 1.26
TARDBP-203ENST00000439080 COL3A1P02461 1466 aaPredicted RBP22.91■■□□□ 1.26
TARDBP-203ENST00000439080 SHANK3Q9BYB0 1731 aa22.9■■□□□ 1.26
TARDBP-203ENST00000439080 MTHFSP49914 203 aa22.89■■□□□ 1.26
TARDBP-203ENST00000439080 NCAPD2Q15021 1401 aa22.89■■□□□ 1.25
TARDBP-203ENST00000439080 EIF4A2Q14240 407 aaKnown RBP22.89■■□□□ 1.25
TARDBP-203ENST00000439080 NBPF6Q5VWK0 638 aa22.88■■□□□ 1.25
TARDBP-203ENST00000439080 NBPF4Q96M43 638 aa22.88■■□□□ 1.25
TARDBP-203ENST00000439080 MEGF6O75095 1541 aa22.87■■□□□ 1.25
TARDBP-203ENST00000439080 PPP2R1AP30153 589 aa22.87■■□□□ 1.25
TARDBP-203ENST00000439080 USHBP1Q8N6Y0 703 aa22.87■■□□□ 1.25
TARDBP-203ENST00000439080 TNS2Q63HR2 1409 aa22.87■■□□□ 1.25
TARDBP-203ENST00000439080 PKD1L3Q7Z443 1732 aa22.86■■□□□ 1.25
TARDBP-203ENST00000439080 CDCA7Q9BWT1 371 aaPredicted RBP22.85■■□□□ 1.25
TARDBP-203ENST00000439080 IL2RBP14784 551 aa22.84■■□□□ 1.25
TARDBP-203ENST00000439080 RALBP1Q15311 655 aa22.83■■□□□ 1.25
TARDBP-203ENST00000439080 KRT27Q7Z3Y8 459 aa22.82■■□□□ 1.24
TARDBP-203ENST00000439080 EYA1Q99502 592 aa22.82■■□□□ 1.24
TARDBP-203ENST00000439080 OVOS2A0A0G2JMS6 1433 aa22.82■■□□□ 1.24
TARDBP-203ENST00000439080 IGSF1Q8N6C5 1336 aa22.82■■□□□ 1.24
TARDBP-203ENST00000439080 IL13P35225 146 aa22.8■■□□□ 1.24
TARDBP-203ENST00000439080 DDB1Q16531 1140 aa22.8■■□□□ 1.24
TARDBP-203ENST00000439080 SBF2Q86WG5 1849 aa22.79■■□□□ 1.24
TARDBP-203ENST00000439080 CFAP53Q96M91 514 aa22.78■■□□□ 1.24
TARDBP-203ENST00000439080 DIAPH1O60610 1272 aaKnown RBP22.77■■□□□ 1.24
TARDBP-203ENST00000439080 PDE3BQ13370 1112 aa22.77■■□□□ 1.24
TARDBP-203ENST00000439080 PRKRIP1Q9H875 184 aaPredicted RBP22.77■■□□□ 1.24
TARDBP-203ENST00000439080 MYBBP1AQ9BQG0 1328 aaKnown RBP22.77■■□□□ 1.24
TARDBP-203ENST00000439080 RAPGEF4Q8WZA2 1011 aa22.76■■□□□ 1.23
TARDBP-203ENST00000439080 TNS1Q9HBL0 1735 aaKnown RBP22.76■■□□□ 1.23
TARDBP-203ENST00000439080 KDRP35968 1356 aa22.75■■□□□ 1.23
TARDBP-203ENST00000439080 DOT1LQ8TEK3 1739 aa22.75■■□□□ 1.23
TARDBP-203ENST00000439080 FAM182BQ5T319 152 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms