RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 GCP02774 474 aa14.5□□□□□ -0.09
SMPD4-208ENST00000439029 ADGRB1O14514 1584 aa14.5□□□□□ -0.09
SMPD4-208ENST00000439029 SHANK3Q9BYB0 1731 aa14.49□□□□□ -0.09
SMPD4-208ENST00000439029 USP19O94966 1318 aa14.48□□□□□ -0.09
SMPD4-208ENST00000439029 CDK19Q9BWU1 502 aa14.48□□□□□ -0.09
SMPD4-208ENST00000439029 KDM2AQ9Y2K7 1162 aa14.48□□□□□ -0.09
SMPD4-208ENST00000439029 NLGN2Q8NFZ4 835 aa14.47□□□□□ -0.09
SMPD4-208ENST00000439029 MAP3K5Q99683 1374 aa14.47□□□□□ -0.09
SMPD4-208ENST00000439029 ITSN1Q15811 1721 aa14.46□□□□□ -0.09
SMPD4-208ENST00000439029 ZNF827Q17R98 1081 aa14.46□□□□□ -0.09
SMPD4-208ENST00000439029 NLRP13Q86W25 1043 aa14.46□□□□□ -0.09
SMPD4-208ENST00000439029 ACSBG1Q96GR2 724 aa14.46□□□□□ -0.09
SMPD4-208ENST00000439029 POLR3AO14802 1390 aaPredicted RBP14.45□□□□□ -0.1
SMPD4-208ENST00000439029 ZNF526Q8TF50 670 aaPredicted RBP14.44□□□□□ -0.1
SMPD4-208ENST00000439029 YBX3P16989 372 aaKnown RBP eCLIP14.43□□□□□ -0.14e-12■■□□□ 11.6
SMPD4-208ENST00000439029 AXIN2Q9Y2T1 843 aa14.43□□□□□ -0.1
SMPD4-208ENST00000439029 CCDC61Q9Y6R9 512 aa14.43□□□□□ -0.1
SMPD4-208ENST00000439029 AKAP12Q02952 1782 aa14.42□□□□□ -0.1
SMPD4-208ENST00000439029 ATP10DQ9P241 1426 aa14.42□□□□□ -0.1
SMPD4-208ENST00000439029 HSPA6P17066 643 aa14.42□□□□□ -0.1
SMPD4-208ENST00000439029 PLEKHG3A1L390 1219 aa14.41□□□□□ -0.1
SMPD4-208ENST00000439029 EXOC5O00471 708 aa14.41□□□□□ -0.1
SMPD4-208ENST00000439029 CSB-PGBD3P0DP91 1061 aa14.41□□□□□ -0.1
SMPD4-208ENST00000439029 POLD1P28340 1107 aa14.41□□□□□ -0.1
SMPD4-208ENST00000439029 NLRP6P59044 892 aa14.41□□□□□ -0.1
SMPD4-208ENST00000439029 AATKQ6ZMQ8 1374 aa14.4□□□□□ -0.1
SMPD4-208ENST00000439029 SOX12O15370 315 aa14.4□□□□□ -0.1
SMPD4-208ENST00000439029 GPBP1L1Q9HC44 474 aaPredicted RBP14.4□□□□□ -0.1
SMPD4-208ENST00000439029 KAT6BQ8WYB5 2073 aa14.4□□□□□ -0.1
SMPD4-208ENST00000439029 BCL9O00512 1426 aa14.4□□□□□ -0.1
SMPD4-208ENST00000439029 WDR17Q8IZU2 1322 aa14.4□□□□□ -0.1
SMPD4-208ENST00000439029 WNK3Q9BYP7 1800 aa14.39□□□□□ -0.11
SMPD4-208ENST00000439029 DCAF11Q8TEB1 546 aa14.39□□□□□ -0.11
SMPD4-208ENST00000439029 CDCA7Q9BWT1 371 aaPredicted RBP14.39□□□□□ -0.11
SMPD4-208ENST00000439029 LRRC4BQ9NT99 713 aa14.39□□□□□ -0.11
SMPD4-208ENST00000439029 TOPAZ1Q8N9V7 1692 aa14.39□□□□□ -0.11
SMPD4-208ENST00000439029 CAPN15O75808 1086 aa14.38□□□□□ -0.11
SMPD4-208ENST00000439029 ARHGEF28Q8N1W1 1705 aaKnown RBP14.38□□□□□ -0.11
SMPD4-208ENST00000439029 PAPPAQ13219 1627 aa14.37□□□□□ -0.11
SMPD4-208ENST00000439029 KCNQ4P56696 695 aa14.37□□□□□ -0.11
SMPD4-208ENST00000439029 GRIN3BO60391 1043 aa14.36□□□□□ -0.11
SMPD4-208ENST00000439029 CARD10Q9BWT7 1032 aa14.36□□□□□ -0.11
SMPD4-208ENST00000439029 CABP2Q9NPB3 220 aa14.36□□□□□ -0.11
SMPD4-208ENST00000439029 COL18A1P39060 1754 aa14.36□□□□□ -0.11
SMPD4-208ENST00000439029 GOLGB1Q14789 3259 aaKnown RBP14.36□□□□□ -0.11
SMPD4-208ENST00000439029 PNPLA7Q6ZV29 1317 aa14.36□□□□□ -0.11
SMPD4-208ENST00000439029 PPIP5K1Q6PFW1 1433 aa14.35□□□□□ -0.11
SMPD4-208ENST00000439029 SRPK2P78362 688 aaKnown RBP14.35□□□□□ -0.11
SMPD4-208ENST00000439029 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
SMPD4-208ENST00000439029 RGPD5Q99666 1765 aa14.34□□□□□ -0.11
SMPD4-208ENST00000439029 USP6P35125 1406 aa14.34□□□□□ -0.11
SMPD4-208ENST00000439029 BRD4O60885 1362 aaPredicted RBP14.34□□□□□ -0.11
SMPD4-208ENST00000439029 NHSQ6T4R5 1651 aa14.33□□□□□ -0.11
SMPD4-208ENST00000439029 SLC16A10Q8TF71 515 aa14.33□□□□□ -0.12
SMPD4-208ENST00000439029 TFCP2L1Q9NZI6 479 aa14.33□□□□□ -0.12
SMPD4-208ENST00000439029 WWC3Q9ULE0 1092 aa14.33□□□□□ -0.12
SMPD4-208ENST00000439029 BTAF1O14981 1849 aa14.32□□□□□ -0.12
SMPD4-208ENST00000439029 SLIT3O75094 1523 aa14.32□□□□□ -0.12
SMPD4-208ENST00000439029 CPSF1Q10570 1443 aaKnown RBP14.32□□□□□ -0.12
SMPD4-208ENST00000439029 TNS2Q63HR2 1409 aa14.32□□□□□ -0.12
SMPD4-208ENST00000439029 MSH5O43196 834 aa14.31□□□□□ -0.12
SMPD4-208ENST00000439029 MSL1Q68DK7 614 aa14.31□□□□□ -0.12
SMPD4-208ENST00000439029 ARHGEF25Q86VW2 580 aa14.31□□□□□ -0.12
SMPD4-208ENST00000439029 CABP1Q9NZU7 370 aa14.31□□□□□ -0.12
SMPD4-208ENST00000439029 CCDC7Q96M83 1385 aa14.28□□□□□ -0.12
SMPD4-208ENST00000439029 NLRP2Q9NX02 1062 aa14.28□□□□□ -0.12
SMPD4-208ENST00000439029 TUBGCP6Q96RT7 1819 aa14.27□□□□□ -0.12
SMPD4-208ENST00000439029 ADCY9O60503 1353 aa14.27□□□□□ -0.12
SMPD4-208ENST00000439029 COL13A1Q5TAT6 717 aaPredicted RBP14.27□□□□□ -0.13
SMPD4-208ENST00000439029 COL24A1Q17RW2 1714 aa14.27□□□□□ -0.13
SMPD4-208ENST00000439029 PIK3C2AO00443 1686 aa14.26□□□□□ -0.13
SMPD4-208ENST00000439029 KIF3CO14782 793 aa14.26□□□□□ -0.13
SMPD4-208ENST00000439029 IL2RBP14784 551 aa14.25□□□□□ -0.13
SMPD4-208ENST00000439029 SLC27A3Q5K4L6 730 aa14.25□□□□□ -0.13
SMPD4-208ENST00000439029 COL23A1Q86Y22 540 aaPredicted RBP14.25□□□□□ -0.13
SMPD4-208ENST00000439029 DNAJC5GQ8N7S2 189 aa14.25□□□□□ -0.13
SMPD4-208ENST00000439029 SYTL4Q96C24 671 aaPredicted RBP14.25□□□□□ -0.13
SMPD4-208ENST00000439029 ABCC6O95255 1503 aa14.25□□□□□ -0.13
SMPD4-208ENST00000439029 TRPM1Q7Z4N2 1603 aa14.24□□□□□ -0.13
SMPD4-208ENST00000439029 APLP1P51693 650 aa14.24□□□□□ -0.13
SMPD4-208ENST00000439029 NBPF1Q3BBV0 1214 aa14.24□□□□□ -0.13
SMPD4-208ENST00000439029 KCNH5Q8NCM2 988 aa14.24□□□□□ -0.13
SMPD4-208ENST00000439029 DDX54Q8TDD1 881 aaKnown RBP14.24□□□□□ -0.13
SMPD4-208ENST00000439029 HTRA3P83110 453 aa14.23□□□□□ -0.13
SMPD4-208ENST00000439029 QSER1Q2KHR3 1735 aa14.23□□□□□ -0.13
SMPD4-208ENST00000439029 TTC21BQ7Z4L5 1316 aa14.22□□□□□ -0.13
SMPD4-208ENST00000439029 PRIM1P49642 420 aaKnown RBP14.21□□□□□ -0.13
SMPD4-208ENST00000439029 CENPJQ9HC77 1338 aaPredicted RBP14.2□□□□□ -0.14
SMPD4-208ENST00000439029 TNS4Q8IZW8 715 aa14.2□□□□□ -0.14
SMPD4-208ENST00000439029 CCNL1Q9UK58 526 aaPredicted RBP14.2□□□□□ -0.14
SMPD4-208ENST00000439029 CD2APQ9Y5K6 639 aa14.19□□□□□ -0.14
SMPD4-208ENST00000439029 NFAT5O94916 1531 aa14.19□□□□□ -0.14
SMPD4-208ENST00000439029 ERBB3P21860 1342 aa14.18□□□□□ -0.14
SMPD4-208ENST00000439029 ANKRD24Q8TF21 1146 aa14.18□□□□□ -0.14
SMPD4-208ENST00000439029 IGSF1Q8N6C5 1336 aa14.17□□□□□ -0.14
SMPD4-208ENST00000439029 QRICH2Q9H0J4 1663 aa14.17□□□□□ -0.14
SMPD4-208ENST00000439029 STAC3Q96MF2 364 aa14.17□□□□□ -0.14
SMPD4-208ENST00000439029 PRELPP51888 382 aa14.16□□□□□ -0.14
SMPD4-208ENST00000439029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.16□□□□□ -0.14
SMPD4-208ENST00000439029 LTV1Q96GA3 475 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms