RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PTMSP20962 102 aa16.43■□□□□ 0.22
ACTN1-204ENST00000438964 ABCA6Q8N139 1617 aa16.43■□□□□ 0.22
ACTN1-204ENST00000438964 FAM83GA6ND36 823 aa16.43■□□□□ 0.22
ACTN1-204ENST00000438964 NUCB2P80303 420 aa16.43■□□□□ 0.22
ACTN1-204ENST00000438964 KRT24Q2M2I5 525 aa16.43■□□□□ 0.22
ACTN1-204ENST00000438964 USP26Q9BXU7 913 aa16.43■□□□□ 0.22
ACTN1-204ENST00000438964 RABEP1Q15276 862 aa16.42■□□□□ 0.22
ACTN1-204ENST00000438964 GCC1Q96CN9 775 aa16.42■□□□□ 0.22
ACTN1-204ENST00000438964 LARP6Q9BRS8 491 aaKnown RBP16.42■□□□□ 0.22
ACTN1-204ENST00000438964 LRSAM1Q6UWE0 723 aa16.41■□□□□ 0.22
ACTN1-204ENST00000438964 KANK1Q14678 1352 aa16.41■□□□□ 0.22
ACTN1-204ENST00000438964 MINK1Q8N4C8 1332 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-204ENST00000438964 GADD45BO75293 160 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-204ENST00000438964 SDSP20132 328 aa16.41■□□□□ 0.22
ACTN1-204ENST00000438964 GGT6Q6P531 493 aa16.41■□□□□ 0.22
ACTN1-204ENST00000438964 TRPM2O94759 1503 aa16.41■□□□□ 0.22
ACTN1-204ENST00000438964 CYP2E1P05181 493 aaPredicted RBP16.4■□□□□ 0.22
ACTN1-204ENST00000438964 NEK4P51957 841 aa16.4■□□□□ 0.22
ACTN1-204ENST00000438964 SASS6Q6UVJ0 657 aa16.4■□□□□ 0.22
ACTN1-204ENST00000438964 USP25Q9UHP3 1055 aa16.4■□□□□ 0.22
ACTN1-204ENST00000438964 DIAPH1O60610 1272 aaKnown RBP16.4■□□□□ 0.22
ACTN1-204ENST00000438964 VAMP4O75379 141 aa16.39■□□□□ 0.21
ACTN1-204ENST00000438964 MRPL50Q8N5N7 158 aaKnown RBP16.39■□□□□ 0.21
ACTN1-204ENST00000438964 C8orf58Q8NAV2 365 aa16.39■□□□□ 0.21
ACTN1-204ENST00000438964 CCDC39Q9UFE4 941 aa16.39■□□□□ 0.21
ACTN1-204ENST00000438964 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
ACTN1-204ENST00000438964 DYNC1I1O14576 645 aa16.38■□□□□ 0.21
ACTN1-204ENST00000438964 CT47B1P0C2W7 299 aaPredicted RBP16.38■□□□□ 0.21
ACTN1-204ENST00000438964 TTC22Q5TAA0 569 aa16.38■□□□□ 0.21
ACTN1-204ENST00000438964 ST18O60284 1047 aa16.37■□□□□ 0.21
ACTN1-204ENST00000438964 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
ACTN1-204ENST00000438964 CFAP74Q9C0B2 1584 aa16.37■□□□□ 0.21
ACTN1-204ENST00000438964 FYB1O15117 783 aa16.37■□□□□ 0.21
ACTN1-204ENST00000438964 ZNF710Q8N1W2 664 aa16.37■□□□□ 0.21
ACTN1-204ENST00000438964 IBTKQ9P2D0 1353 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-204ENST00000438964 KIAA2012Q0VF49 1180 aa16.37■□□□□ 0.21
ACTN1-204ENST00000438964 CLEC17AQ6ZS10 378 aa16.37■□□□□ 0.21
ACTN1-204ENST00000438964 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
ACTN1-204ENST00000438964 ATP2B3Q16720 1220 aa16.36■□□□□ 0.21
ACTN1-204ENST00000438964 A0A1W2PP64 1363 aa16.36■□□□□ 0.21
ACTN1-204ENST00000438964 MAP7D2Q96T17 732 aa16.36■□□□□ 0.21
ACTN1-204ENST00000438964 TWISTNBQ3B726 338 aaPredicted RBP16.35■□□□□ 0.21
ACTN1-204ENST00000438964 PPP4R3BQ5MIZ7 849 aa16.35■□□□□ 0.21
ACTN1-204ENST00000438964 CSPP1Q1MSJ5 1256 aa16.35■□□□□ 0.21
ACTN1-204ENST00000438964 TMX3Q96JJ7 454 aa16.35■□□□□ 0.21
ACTN1-204ENST00000438964 EVC2Q86UK5 1308 aa16.35■□□□□ 0.21
ACTN1-204ENST00000438964 INTS3Q68E01 1043 aaKnown RBP16.35■□□□□ 0.21
ACTN1-204ENST00000438964 TSPY26PQ9H489 355 aa16.35■□□□□ 0.21
ACTN1-204ENST00000438964 PALD1Q9ULE6 856 aa16.35■□□□□ 0.21
ACTN1-204ENST00000438964 MAP3K4Q9Y6R4 1608 aa16.34■□□□□ 0.21
ACTN1-204ENST00000438964 HS1BP3Q53T59 392 aa16.34■□□□□ 0.21
ACTN1-204ENST00000438964 SLC24A1O60721 1099 aa16.33■□□□□ 0.21
ACTN1-204ENST00000438964 ZSCAN20P17040 1043 aaPredicted RBP16.33■□□□□ 0.21
ACTN1-204ENST00000438964 ALDH1L2Q3SY69 923 aa16.33■□□□□ 0.21
ACTN1-204ENST00000438964 SMAP1Q8IYB5 467 aaPredicted RBP16.33■□□□□ 0.21
ACTN1-204ENST00000438964 CCDC94Q9BW85 323 aaPredicted RBP16.33■□□□□ 0.21
ACTN1-204ENST00000438964 HCLS1P14317 486 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-204ENST00000438964 TERF1P54274 439 aa16.33■□□□□ 0.2
ACTN1-204ENST00000438964 SPC24Q8NBT2 197 aa16.33■□□□□ 0.2
ACTN1-204ENST00000438964 SHROOM2Q13796 1616 aa16.33■□□□□ 0.2
ACTN1-204ENST00000438964 C14orf93Q9H972 538 aaKnown RBP16.32■□□□□ 0.2
ACTN1-204ENST00000438964 STAC3Q96MF2 364 aa16.32■□□□□ 0.2
ACTN1-204ENST00000438964 SLC4A10Q6U841 1118 aa16.31■□□□□ 0.2
ACTN1-204ENST00000438964 EMILIN1Q9Y6C2 1016 aa16.31■□□□□ 0.2
ACTN1-204ENST00000438964 NOLC1Q14978 699 aaKnown RBP eCLIP16.31■□□□□ 0.28e-10■□□□□ 9.7
ACTN1-204ENST00000438964 CHMP3Q9Y3E7 222 aa16.31■□□□□ 0.2
ACTN1-204ENST00000438964 ERCC6L2Q5T890 1561 aa16.31■□□□□ 0.2
ACTN1-204ENST00000438964 ANKRD36BQ8N2N9 1353 aa16.31■□□□□ 0.2
ACTN1-204ENST00000438964 MEIS3Q99687 375 aa16.3■□□□□ 0.2
ACTN1-204ENST00000438964 ZRANB1Q9UGI0 708 aa16.3■□□□□ 0.2
ACTN1-204ENST00000438964 RILPL2Q969X0 211 aa16.3■□□□□ 0.2
ACTN1-204ENST00000438964 PLCH2O75038 1416 aa16.3■□□□□ 0.2
ACTN1-204ENST00000438964 ADCY5O95622 1261 aa16.29■□□□□ 0.2
ACTN1-204ENST00000438964 ANO2Q9NQ90 1003 aa16.29■□□□□ 0.2
ACTN1-204ENST00000438964 EXOC6BQ9Y2D4 811 aa16.29■□□□□ 0.2
ACTN1-204ENST00000438964 U2AF2P26368 475 aaKnown RBP eCLIP16.29■□□□□ 0.21e-13■■■□□ 15
ACTN1-204ENST00000438964 USP48Q86UV5 1035 aa16.29■□□□□ 0.2
ACTN1-204ENST00000438964 MYRIPQ8NFW9 859 aa16.29■□□□□ 0.2
ACTN1-204ENST00000438964 MIS18AQ9NYP9 233 aa16.29■□□□□ 0.2
ACTN1-204ENST00000438964 DCTPP1Q9H773 170 aa16.29■□□□□ 0.2
ACTN1-204ENST00000438964 CWC22Q9HCG8 908 aaKnown RBP16.29■□□□□ 0.2
ACTN1-204ENST00000438964 CABP1Q9NZU7 370 aa16.29■□□□□ 0.2
ACTN1-204ENST00000438964 MROH2AA6NES4 1674 aa16.29■□□□□ 0.2
ACTN1-204ENST00000438964 QRICH2Q9H0J4 1663 aa16.29■□□□□ 0.2
ACTN1-204ENST00000438964 ADGRB2O60241 1585 aa16.28■□□□□ 0.2
ACTN1-204ENST00000438964 CASC1Q6TDU7 716 aa16.28■□□□□ 0.2
ACTN1-204ENST00000438964 MAP4K4O95819 1239 aaPredicted RBP16.28■□□□□ 0.2
ACTN1-204ENST00000438964 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
ACTN1-204ENST00000438964 F6X3S4 739 aa16.27■□□□□ 0.2
ACTN1-204ENST00000438964 DMTNQ08495 405 aa16.27■□□□□ 0.2
ACTN1-204ENST00000438964 TRIM6-TRIM34B2RNG4 842 aa16.27■□□□□ 0.2
ACTN1-204ENST00000438964 BCL2L12Q9HB09 334 aa16.27■□□□□ 0.2
ACTN1-204ENST00000438964 CNPY2Q9Y2B0 182 aa16.27■□□□□ 0.2
ACTN1-204ENST00000438964 ABCC4O15439 1325 aa16.27■□□□□ 0.19
ACTN1-204ENST00000438964 IL16Q14005 1332 aa16.27■□□□□ 0.19
ACTN1-204ENST00000438964 ERC2O15083 957 aa16.26■□□□□ 0.19
ACTN1-204ENST00000438964 FIBPO43427 364 aa16.26■□□□□ 0.19
ACTN1-204ENST00000438964 RRS1Q15050 365 aaKnown RBP16.26■□□□□ 0.19
ACTN1-204ENST00000438964 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
ACTN1-204ENST00000438964 SBNO2Q9Y2G9 1366 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms