RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 KIF1BO60333 1816 aa10.73□□□□□ -0.69
HMGB2-202ENST00000438704 OSBPP22059 807 aa10.73□□□□□ -0.69
HMGB2-202ENST00000438704 SLC52A1Q9NWF4 448 aa10.73□□□□□ -0.69
HMGB2-202ENST00000438704 FAM198AQ9UFP1 575 aa10.73□□□□□ -0.69
HMGB2-202ENST00000438704 SIGLEC1Q9BZZ2 1709 aa10.72□□□□□ -0.69
HMGB2-202ENST00000438704 PPP4CP60510 307 aa10.72□□□□□ -0.69
HMGB2-202ENST00000438704 USP47Q96K76 1375 aa10.72□□□□□ -0.69
HMGB2-202ENST00000438704 IFT172Q9UG01 1749 aa10.72□□□□□ -0.69
HMGB2-202ENST00000438704 ZFYVE9O95405 1425 aa10.71□□□□□ -0.69
HMGB2-202ENST00000438704 ERVK-7P63135 1459 aa10.71□□□□□ -0.69
HMGB2-202ENST00000438704 SPATA31D1Q6ZQQ2 1576 aa10.71□□□□□ -0.69
HMGB2-202ENST00000438704 TATDN2Q93075 761 aa10.71□□□□□ -0.69
HMGB2-202ENST00000438704 POLR1AO95602 1720 aaPredicted RBP10.7□□□□□ -0.7
HMGB2-202ENST00000438704 PREX1Q8TCU6 1659 aa10.7□□□□□ -0.7
HMGB2-202ENST00000438704 UGGT1Q9NYU2 1555 aa10.7□□□□□ -0.7
HMGB2-202ENST00000438704 SAMD7Q7Z3H4 446 aa10.7□□□□□ -0.7
HMGB2-202ENST00000438704 PNMA3Q9UL41 463 aa10.7□□□□□ -0.7
HMGB2-202ENST00000438704 ROCK2O75116 1388 aaKnown RBP10.69□□□□□ -0.7
HMGB2-202ENST00000438704 SMAPO00193 183 aa10.69□□□□□ -0.7
HMGB2-202ENST00000438704 RGL3Q3MIN7 710 aa10.69□□□□□ -0.7
HMGB2-202ENST00000438704 CARD11Q9BXL7 1154 aa10.69□□□□□ -0.7
HMGB2-202ENST00000438704 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
HMGB2-202ENST00000438704 CCDC7Q96M83 1385 aa10.68□□□□□ -0.7
HMGB2-202ENST00000438704 WASHC2AQ641Q2 1341 aa10.68□□□□□ -0.7
HMGB2-202ENST00000438704 KDM2AQ9Y2K7 1162 aa10.68□□□□□ -0.7
HMGB2-202ENST00000438704 MROH2AA6NES4 1674 aa10.68□□□□□ -0.7
HMGB2-202ENST00000438704 PPLO60437 1756 aa10.67□□□□□ -0.7
HMGB2-202ENST00000438704 SETBP1Q9Y6X0 1596 aa10.66□□□□□ -0.7
HMGB2-202ENST00000438704 C3orf80F5H4A9 247 aa10.66□□□□□ -0.7
HMGB2-202ENST00000438704 TTC13Q8NBP0 860 aa10.66□□□□□ -0.7
HMGB2-202ENST00000438704 NECTIN2Q92692 538 aa10.66□□□□□ -0.7
HMGB2-202ENST00000438704 CLTCQ00610 1675 aaKnown RBP10.66□□□□□ -0.7
HMGB2-202ENST00000438704 PIK3C2GO75747 1445 aa10.66□□□□□ -0.7
HMGB2-202ENST00000438704 TMEM131LA2VDJ0 1609 aa10.66□□□□□ -0.7
HMGB2-202ENST00000438704 NEXMIFQ5QGS0 1516 aa10.65□□□□□ -0.7
HMGB2-202ENST00000438704 SLC24A1O60721 1099 aa10.65□□□□□ -0.7
HMGB2-202ENST00000438704 HDGFP51858 240 aaKnown RBP10.65□□□□□ -0.7
HMGB2-202ENST00000438704 IDI1Q13907 227 aa10.65□□□□□ -0.7
HMGB2-202ENST00000438704 ZNF326Q5BKZ1 582 aaKnown RBP10.65□□□□□ -0.7
HMGB2-202ENST00000438704 NUDT18Q6ZVK8 323 aa10.65□□□□□ -0.7
HMGB2-202ENST00000438704 ZMYM3Q14202 1370 aa10.65□□□□□ -0.71
HMGB2-202ENST00000438704 KDM5AP29375 1690 aaKnown RBP10.64□□□□□ -0.71
HMGB2-202ENST00000438704 IQGAP1P46940 1657 aa10.64□□□□□ -0.71
HMGB2-202ENST00000438704 SCAF11Q99590 1463 aaKnown RBP10.64□□□□□ -0.71
HMGB2-202ENST00000438704 NBPF1Q3BBV0 1214 aa10.64□□□□□ -0.71
HMGB2-202ENST00000438704 TJAP1Q5JTD0 557 aa10.64□□□□□ -0.71
HMGB2-202ENST00000438704 CFAP65Q6ZU64 1925 aaKnown RBP10.64□□□□□ -0.71
HMGB2-202ENST00000438704 KIF7Q2M1P5 1343 aa10.63□□□□□ -0.71
HMGB2-202ENST00000438704 C11orf95C9JLR9 678 aaPredicted RBP10.63□□□□□ -0.71
HMGB2-202ENST00000438704 DDX10Q13206 875 aaKnown RBP10.63□□□□□ -0.71
HMGB2-202ENST00000438704 HIRIP3Q9BW71 556 aaPredicted RBP10.63□□□□□ -0.71
HMGB2-202ENST00000438704 C14orf93Q9H972 538 aaKnown RBP10.63□□□□□ -0.71
HMGB2-202ENST00000438704 ADGRF5Q8IZF2 1346 aa10.62□□□□□ -0.71
HMGB2-202ENST00000438704 ARHGEF1Q92888 912 aaKnown RBP10.62□□□□□ -0.71
HMGB2-202ENST00000438704 TESK2Q96S53 571 aa10.62□□□□□ -0.71
HMGB2-202ENST00000438704 IL21Q9HBE4 155 aa10.62□□□□□ -0.71
HMGB2-202ENST00000438704 NPDC1Q9NQX5 325 aaPredicted RBP10.62□□□□□ -0.71
HMGB2-202ENST00000438704 SBNO2Q9Y2G9 1366 aa10.62□□□□□ -0.71
HMGB2-202ENST00000438704 ADGRB1O14514 1584 aa10.61□□□□□ -0.71
HMGB2-202ENST00000438704 ST20-MTHFSA0A0A6YYL1 179 aa10.61□□□□□ -0.71
HMGB2-202ENST00000438704 EIF3AQ14152 1382 aaKnown RBP10.61□□□□□ -0.71
HMGB2-202ENST00000438704 A2ML1A8K2U0 1454 aa10.61□□□□□ -0.71
HMGB2-202ENST00000438704 FBXO31Q5XUX0 539 aaPredicted RBP10.6□□□□□ -0.71
HMGB2-202ENST00000438704 PADI6Q6TGC4 694 aa10.6□□□□□ -0.71
HMGB2-202ENST00000438704 MTRQ99707 1265 aa10.6□□□□□ -0.71
HMGB2-202ENST00000438704 MYO3AQ8NEV4 1616 aa10.59□□□□□ -0.71
HMGB2-202ENST00000438704 CCER2I3L3R5 266 aa10.59□□□□□ -0.71
HMGB2-202ENST00000438704 ESF1Q9H501 851 aaKnown RBP10.59□□□□□ -0.71
HMGB2-202ENST00000438704 TNRQ92752 1358 aa10.59□□□□□ -0.71
HMGB2-202ENST00000438704 NLRP1Q9C000 1473 aa10.59□□□□□ -0.71
HMGB2-202ENST00000438704 RNF40O75150 1001 aa10.58□□□□□ -0.72
HMGB2-202ENST00000438704 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
HMGB2-202ENST00000438704 LAPTM4AQ15012 233 aa10.57□□□□□ -0.72
HMGB2-202ENST00000438704 CFAP70Q5T0N1 1121 aa10.57□□□□□ -0.72
HMGB2-202ENST00000438704 SLC4A3P48751 1232 aa10.56□□□□□ -0.72
HMGB2-202ENST00000438704 MLECQ14165 292 aa10.56□□□□□ -0.72
HMGB2-202ENST00000438704 MYO5BQ9ULV0 1848 aa10.56□□□□□ -0.72
HMGB2-202ENST00000438704 ANP32CO43423 234 aa10.55□□□□□ -0.72
HMGB2-202ENST00000438704 APLP1P51693 650 aa10.55□□□□□ -0.72
HMGB2-202ENST00000438704 TMF1P82094 1093 aa10.55□□□□□ -0.72
HMGB2-202ENST00000438704 CDCA8Q53HL2 280 aa10.55□□□□□ -0.72
HMGB2-202ENST00000438704 SWT1Q5T5J6 900 aaKnown RBP10.55□□□□□ -0.72
HMGB2-202ENST00000438704 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.55□□□□□ -0.72
HMGB2-202ENST00000438704 KCNV2Q8TDN2 545 aa10.55□□□□□ -0.72
HMGB2-202ENST00000438704 FER1L4A9Z1Z3 1794 aa10.54□□□□□ -0.72
HMGB2-202ENST00000438704 PUS7Q96PZ0 661 aaKnown RBP10.54□□□□□ -0.72
HMGB2-202ENST00000438704 EYA1Q99502 592 aa10.54□□□□□ -0.72
HMGB2-202ENST00000438704 RIMS2Q9UQ26 1411 aa10.54□□□□□ -0.72
HMGB2-202ENST00000438704 KTN1Q86UP2 1357 aaKnown RBP10.53□□□□□ -0.72
HMGB2-202ENST00000438704 Q6ZNB5 142 aa10.53□□□□□ -0.72
HMGB2-202ENST00000438704 PRR14Q9BWN1 585 aa10.53□□□□□ -0.72
HMGB2-202ENST00000438704 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
HMGB2-202ENST00000438704 C3P01024 1663 aa10.53□□□□□ -0.72
HMGB2-202ENST00000438704 ADAMTSL3P82987 1691 aa10.53□□□□□ -0.72
HMGB2-202ENST00000438704 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
HMGB2-202ENST00000438704 UBR1Q8IWV7 1749 aa10.53□□□□□ -0.72
HMGB2-202ENST00000438704 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.72
HMGB2-202ENST00000438704 TMEM2Q9UHN6 1383 aa10.52□□□□□ -0.72
HMGB2-202ENST00000438704 MLLT3P42568 568 aaPredicted RBP10.52□□□□□ -0.73
HMGB2-202ENST00000438704 ARHGAP23Q9P227 1491 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms