RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 COG3Q96JB2 828 aa24.72■■□□□ 1.55
NCSTN-208ENST00000438008 CARD14Q9BXL6 1004 aa24.72■■□□□ 1.55
NCSTN-208ENST00000438008 THRAP3Q9Y2W1 955 aaKnown RBP24.71■■□□□ 1.55
NCSTN-208ENST00000438008 KRT27Q7Z3Y8 459 aa24.7■■□□□ 1.54
NCSTN-208ENST00000438008 TCP11L2Q8N4U5 519 aa24.7■■□□□ 1.54
NCSTN-208ENST00000438008 CRB1P82279 1406 aa24.69■■□□□ 1.54
NCSTN-208ENST00000438008 A0A0G2JS52 829 aa24.69■■□□□ 1.54
NCSTN-208ENST00000438008 MYT1Q01538 1121 aa24.69■■□□□ 1.54
NCSTN-208ENST00000438008 USP35Q9P2H5 1018 aa24.69■■□□□ 1.54
NCSTN-208ENST00000438008 THSD7AQ9UPZ6 1657 aa24.69■■□□□ 1.54
NCSTN-208ENST00000438008 WDR17Q8IZU2 1322 aa24.68■■□□□ 1.54
NCSTN-208ENST00000438008 C11orf95C9JLR9 678 aaPredicted RBP24.67■■□□□ 1.54
NCSTN-208ENST00000438008 POLR3GLQ9BT43 218 aa24.67■■□□□ 1.54
NCSTN-208ENST00000438008 BRWD3Q6RI45 1802 aa24.66■■□□□ 1.54
NCSTN-208ENST00000438008 GGNBP2Q9H3C7 697 aa24.66■■□□□ 1.54
NCSTN-208ENST00000438008 NSD3Q9BZ95 1437 aa24.66■■□□□ 1.54
NCSTN-208ENST00000438008 TOM1L2Q6ZVM7 507 aa24.65■■□□□ 1.54
NCSTN-208ENST00000438008 CCDC125Q86Z20 511 aa24.65■■□□□ 1.54
NCSTN-208ENST00000438008 IP6K1Q92551 441 aa24.62■■□□□ 1.53
NCSTN-208ENST00000438008 CARD10Q9BWT7 1032 aa24.62■■□□□ 1.53
NCSTN-208ENST00000438008 CSB-PGBD3P0DP91 1061 aa24.61■■□□□ 1.53
NCSTN-208ENST00000438008 ERBB3P21860 1342 aa24.61■■□□□ 1.53
NCSTN-208ENST00000438008 MAP3K19Q56UN5 1328 aa24.61■■□□□ 1.53
NCSTN-208ENST00000438008 BLMP54132 1417 aaPredicted RBP24.6■■□□□ 1.53
NCSTN-208ENST00000438008 CGNL1Q0VF96 1302 aa24.6■■□□□ 1.53
NCSTN-208ENST00000438008 LTN1O94822 1766 aa24.59■■□□□ 1.53
NCSTN-208ENST00000438008 PANK3Q9H999 370 aa24.59■■□□□ 1.53
NCSTN-208ENST00000438008 RGPD5Q99666 1765 aa24.59■■□□□ 1.53
NCSTN-208ENST00000438008 FBLN1P23142 703 aa24.58■■□□□ 1.53
NCSTN-208ENST00000438008 KIF7Q2M1P5 1343 aa24.58■■□□□ 1.52
NCSTN-208ENST00000438008 KIF20BQ96Q89 1820 aa24.57■■□□□ 1.52
NCSTN-208ENST00000438008 ANKRD24Q8TF21 1146 aa24.57■■□□□ 1.52
NCSTN-208ENST00000438008 CDCA7Q9BWT1 371 aaPredicted RBP24.57■■□□□ 1.52
NCSTN-208ENST00000438008 EP400Q96L91 3159 aa24.56■■□□□ 1.52
NCSTN-208ENST00000438008 CCDC7Q96M83 1385 aa24.56■■□□□ 1.52
NCSTN-208ENST00000438008 HOXC9P31274 260 aa24.56■■□□□ 1.52
NCSTN-208ENST00000438008 AMPHP49418 695 aa24.55■■□□□ 1.52
NCSTN-208ENST00000438008 PDE3BQ13370 1112 aa24.55■■□□□ 1.52
NCSTN-208ENST00000438008 RTL1A6NKG5 1358 aa24.54■■□□□ 1.52
NCSTN-208ENST00000438008 RRS1Q15050 365 aaKnown RBP24.54■■□□□ 1.52
NCSTN-208ENST00000438008 PARP4Q9UKK3 1724 aaKnown RBP24.53■■□□□ 1.52
NCSTN-208ENST00000438008 FAM182BQ5T319 152 aa24.53■■□□□ 1.52
NCSTN-208ENST00000438008 DISP2A7MBM2 1401 aa24.52■■□□□ 1.52
NCSTN-208ENST00000438008 FAM196AQ6ZSG2 479 aa24.52■■□□□ 1.52
NCSTN-208ENST00000438008 NLRP2Q9NX02 1062 aa24.52■■□□□ 1.52
NCSTN-208ENST00000438008 KIF24Q5T7B8 1368 aa24.52■■□□□ 1.52
NCSTN-208ENST00000438008 DDB1Q16531 1140 aa24.51■■□□□ 1.51
NCSTN-208ENST00000438008 SF3B2Q13435 895 aaKnown RBP24.49■■□□□ 1.51
NCSTN-208ENST00000438008 NSD2O96028 1365 aa24.48■■□□□ 1.51
NCSTN-208ENST00000438008 LTV1Q96GA3 475 aaPredicted RBP24.47■■□□□ 1.51
NCSTN-208ENST00000438008 INSRP06213 1382 aa24.46■■□□□ 1.51
NCSTN-208ENST00000438008 FLT4P35916 1363 aa24.46■■□□□ 1.51
NCSTN-208ENST00000438008 WNK3Q9BYP7 1800 aa24.46■■□□□ 1.51
NCSTN-208ENST00000438008 LRRC37A3O60309 1634 aa24.46■■□□□ 1.51
NCSTN-208ENST00000438008 IL2RBP14784 551 aa24.45■■□□□ 1.5
NCSTN-208ENST00000438008 KNSTRNQ9Y448 316 aa24.45■■□□□ 1.5
NCSTN-208ENST00000438008 WASHC2AQ641Q2 1341 aa24.44■■□□□ 1.5
NCSTN-208ENST00000438008 EXOC5O00471 708 aa24.44■■□□□ 1.5
NCSTN-208ENST00000438008 HSP90AB2PQ58FF8 381 aa24.44■■□□□ 1.5
NCSTN-208ENST00000438008 EMILIN1Q9Y6C2 1016 aa24.44■■□□□ 1.5
NCSTN-208ENST00000438008 FAM208AQ9UK61 1670 aaKnown RBP24.43■■□□□ 1.5
NCSTN-208ENST00000438008 DEFB132Q7Z7B7 95 aa24.43■■□□□ 1.5
NCSTN-208ENST00000438008 OVOS2A0A0G2JMS6 1433 aa24.43■■□□□ 1.5
NCSTN-208ENST00000438008 PEAK1Q9H792 1746 aa24.41■■□□□ 1.5
NCSTN-208ENST00000438008 TRIM37O94972 964 aa24.41■■□□□ 1.5
NCSTN-208ENST00000438008 BAG6P46379 1132 aa24.41■■□□□ 1.5
NCSTN-208ENST00000438008 MARCH10Q8NA82 808 aaPredicted RBP24.41■■□□□ 1.5
NCSTN-208ENST00000438008 POLKQ9UBT6 870 aa24.41■■□□□ 1.5
NCSTN-208ENST00000438008 BCL9O00512 1426 aa24.41■■□□□ 1.5
NCSTN-208ENST00000438008 SMG6Q86US8 1419 aaKnown RBP24.41■■□□□ 1.5
NCSTN-208ENST00000438008 ANKRD26Q9UPS8 1709 aa24.41■■□□□ 1.5
NCSTN-208ENST00000438008 PER1O15534 1290 aaPredicted RBP24.4■■□□□ 1.5
NCSTN-208ENST00000438008 AMER1Q5JTC6 1135 aaPredicted RBP24.4■■□□□ 1.5
NCSTN-208ENST00000438008 TNS2Q63HR2 1409 aa24.4■■□□□ 1.5
NCSTN-208ENST00000438008 RGPD1P0DJD0 1748 aa24.39■■□□□ 1.5
NCSTN-208ENST00000438008 NBPF6Q5VWK0 638 aa24.39■■□□□ 1.49
NCSTN-208ENST00000438008 NBPF4Q96M43 638 aa24.39■■□□□ 1.49
NCSTN-208ENST00000438008 PPM1GO15355 546 aaPredicted RBP24.37■■□□□ 1.49
NCSTN-208ENST00000438008 TNNT2P45379 298 aaPredicted RBP24.37■■□□□ 1.49
NCSTN-208ENST00000438008 MORC1Q86VD1 984 aa24.37■■□□□ 1.49
NCSTN-208ENST00000438008 TNS1Q9HBL0 1735 aaKnown RBP24.34■■□□□ 1.49
NCSTN-208ENST00000438008 APBA3O96018 575 aa24.33■■□□□ 1.49
NCSTN-208ENST00000438008 EN1Q05925 392 aaPredicted RBP24.33■■□□□ 1.49
NCSTN-208ENST00000438008 MAP2P11137 1827 aaKnown RBP24.33■■□□□ 1.48
NCSTN-208ENST00000438008 BCL11BQ9C0K0 894 aaPredicted RBP24.31■■□□□ 1.48
NCSTN-208ENST00000438008 RGPD2P0DJD1 1756 aa24.31■■□□□ 1.48
NCSTN-208ENST00000438008 NPC1L1Q9UHC9 1359 aa24.3■■□□□ 1.48
NCSTN-208ENST00000438008 USHBP1Q8N6Y0 703 aa24.3■■□□□ 1.48
NCSTN-208ENST00000438008 CAMKK2Q96RR4 588 aa24.3■■□□□ 1.48
NCSTN-208ENST00000438008 MEGF6O75095 1541 aa24.3■■□□□ 1.48
NCSTN-208ENST00000438008 PARD3Q8TEW0 1356 aa24.29■■□□□ 1.48
NCSTN-208ENST00000438008 NCAPD2Q15021 1401 aa24.29■■□□□ 1.48
NCSTN-208ENST00000438008 RAPGEF4Q8WZA2 1011 aa24.29■■□□□ 1.48
NCSTN-208ENST00000438008 ZCRB1Q8TBF4 217 aaKnown RBP24.28■■□□□ 1.48
NCSTN-208ENST00000438008 EIF4A2Q14240 407 aaKnown RBP24.27■■□□□ 1.48
NCSTN-208ENST00000438008 EZH2Q15910 746 aaKnown RBP24.27■■□□□ 1.48
NCSTN-208ENST00000438008 EYA1Q99502 592 aa24.27■■□□□ 1.48
NCSTN-208ENST00000438008 TATP17735 454 aaPredicted RBP24.26■■□□□ 1.47
NCSTN-208ENST00000438008 SBF2Q86WG5 1849 aa24.26■■□□□ 1.47
NCSTN-208ENST00000438008 PLSCR1O15162 318 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms