RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 SLIT3O75094 1523 aa20.45■□□□□ 0.86
LINC01088-201ENST00000437737 ZNF784Q8NCA9 323 aaPredicted RBP20.45■□□□□ 0.86
LINC01088-201ENST00000437737 CABP2Q9NPB3 220 aa20.45■□□□□ 0.86
LINC01088-201ENST00000437737 STK32BQ9NY57 414 aa20.45■□□□□ 0.86
LINC01088-201ENST00000437737 ATF5Q9Y2D1 282 aaPredicted RBP20.45■□□□□ 0.86
LINC01088-201ENST00000437737 CHD4Q14839 1912 aa20.44■□□□□ 0.86
LINC01088-201ENST00000437737 COL18A1P39060 1754 aa20.44■□□□□ 0.86
LINC01088-201ENST00000437737 PTGER2P43116 358 aa20.43■□□□□ 0.86
LINC01088-201ENST00000437737 PROM2Q8N271 834 aa20.43■□□□□ 0.86
LINC01088-201ENST00000437737 MARCH10Q8NA82 808 aaPredicted RBP20.43■□□□□ 0.86
LINC01088-201ENST00000437737 USP6P35125 1406 aa20.43■□□□□ 0.86
LINC01088-201ENST00000437737 RGPD5Q99666 1765 aa20.42■□□□□ 0.86
LINC01088-201ENST00000437737 CDCA7Q9BWT1 371 aaPredicted RBP20.42■□□□□ 0.86
LINC01088-201ENST00000437737 WDR17Q8IZU2 1322 aa20.42■□□□□ 0.86
LINC01088-201ENST00000437737 QRICH2Q9H0J4 1663 aa20.42■□□□□ 0.86
LINC01088-201ENST00000437737 TXNRD1Q16881 649 aa20.41■□□□□ 0.86
LINC01088-201ENST00000437737 FHDC1Q9C0D6 1143 aaPredicted RBP20.41■□□□□ 0.86
LINC01088-201ENST00000437737 PIK3C2AO00443 1686 aa20.41■□□□□ 0.86
LINC01088-201ENST00000437737 BCL9O00512 1426 aa20.4■□□□□ 0.86
LINC01088-201ENST00000437737 CENPJQ9HC77 1338 aaPredicted RBP20.4■□□□□ 0.86
LINC01088-201ENST00000437737 SENP3-EIF4A1A0A087X0R7 540 aa20.39■□□□□ 0.85
LINC01088-201ENST00000437737 CSB-PGBD3P0DP91 1061 aa20.39■□□□□ 0.85
LINC01088-201ENST00000437737 SLC15A2Q16348 729 aa20.39■□□□□ 0.85
LINC01088-201ENST00000437737 NBPF1Q3BBV0 1214 aa20.39■□□□□ 0.85
LINC01088-201ENST00000437737 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
LINC01088-201ENST00000437737 CABP1Q9NZU7 370 aa20.39■□□□□ 0.85
LINC01088-201ENST00000437737 AXIN2Q9Y2T1 843 aa20.39■□□□□ 0.85
LINC01088-201ENST00000437737 CPSF1Q10570 1443 aaKnown RBP20.38■□□□□ 0.85
LINC01088-201ENST00000437737 MTFR1LQ9H019 292 aa20.38■□□□□ 0.85
LINC01088-201ENST00000437737 EXOC5O00471 708 aa20.35■□□□□ 0.85
LINC01088-201ENST00000437737 SOX12O15370 315 aa20.35■□□□□ 0.85
LINC01088-201ENST00000437737 CARD10Q9BWT7 1032 aa20.35■□□□□ 0.85
LINC01088-201ENST00000437737 NHSQ6T4R5 1651 aa20.34■□□□□ 0.85
LINC01088-201ENST00000437737 ARHGEF25Q86VW2 580 aa20.33■□□□□ 0.85
LINC01088-201ENST00000437737 KCNH5Q8NCM2 988 aa20.33■□□□□ 0.85
LINC01088-201ENST00000437737 C1QTNF8P60827 252 aa20.32■□□□□ 0.84
LINC01088-201ENST00000437737 TNS2Q63HR2 1409 aa20.31■□□□□ 0.84
LINC01088-201ENST00000437737 ARXQ96QS3 562 aa20.31■□□□□ 0.84
LINC01088-201ENST00000437737 SGIP1Q9BQI5 828 aa20.31■□□□□ 0.84
LINC01088-201ENST00000437737 CCDC7Q96M83 1385 aa20.31■□□□□ 0.84
LINC01088-201ENST00000437737 TRPM1Q7Z4N2 1603 aa20.31■□□□□ 0.84
LINC01088-201ENST00000437737 ACSBG1Q96GR2 724 aa20.29■□□□□ 0.84
LINC01088-201ENST00000437737 TTC21BQ7Z4L5 1316 aa20.28■□□□□ 0.84
LINC01088-201ENST00000437737 KAT6BQ8WYB5 2073 aa20.28■□□□□ 0.84
LINC01088-201ENST00000437737 PAPPAQ13219 1627 aa20.28■□□□□ 0.84
LINC01088-201ENST00000437737 UTRNP46939 3433 aa20.28■□□□□ 0.84
LINC01088-201ENST00000437737 EVC2Q86UK5 1308 aa20.27■□□□□ 0.84
LINC01088-201ENST00000437737 BTAF1O14981 1849 aa20.27■□□□□ 0.84
LINC01088-201ENST00000437737 ABCC6O95255 1503 aa20.27■□□□□ 0.83
LINC01088-201ENST00000437737 MAP3K5Q99683 1374 aa20.26■□□□□ 0.83
LINC01088-201ENST00000437737 GPR162Q16538 588 aa20.26■□□□□ 0.83
LINC01088-201ENST00000437737 ZNF692Q9BU19 519 aaPredicted RBP20.26■□□□□ 0.83
LINC01088-201ENST00000437737 NFAT5O94916 1531 aa20.26■□□□□ 0.83
LINC01088-201ENST00000437737 KLHL34Q8N239 644 aa20.25■□□□□ 0.83
LINC01088-201ENST00000437737 TTC21AQ8NDW8 1320 aa20.25■□□□□ 0.83
LINC01088-201ENST00000437737 ZNF827Q17R98 1081 aa20.22■□□□□ 0.83
LINC01088-201ENST00000437737 GIGYF1O75420 1035 aaPredicted RBP20.21■□□□□ 0.83
LINC01088-201ENST00000437737 TRIM26Q12899 539 aaPredicted RBP20.21■□□□□ 0.83
LINC01088-201ENST00000437737 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
LINC01088-201ENST00000437737 NLRP2Q9NX02 1062 aa20.21■□□□□ 0.83
LINC01088-201ENST00000437737 LTN1O94822 1766 aa20.21■□□□□ 0.83
LINC01088-201ENST00000437737 KTN1Q86UP2 1357 aaKnown RBP20.21■□□□□ 0.83
LINC01088-201ENST00000437737 QSER1Q2KHR3 1735 aa20.2■□□□□ 0.82
LINC01088-201ENST00000437737 IL2RBP14784 551 aa20.2■□□□□ 0.82
LINC01088-201ENST00000437737 MON2Q7Z3U7 1717 aa20.19■□□□□ 0.82
LINC01088-201ENST00000437737 POLD1P28340 1107 aa20.19■□□□□ 0.82
LINC01088-201ENST00000437737 ERBB3P21860 1342 aa20.19■□□□□ 0.82
LINC01088-201ENST00000437737 LRRC4BQ9NT99 713 aa20.17■□□□□ 0.82
LINC01088-201ENST00000437737 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.16■□□□□ 0.82
LINC01088-201ENST00000437737 SLC16A10Q8TF71 515 aa20.16■□□□□ 0.82
LINC01088-201ENST00000437737 USP54Q70EL1 1684 aa20.15■□□□□ 0.82
LINC01088-201ENST00000437737 COL24A1Q17RW2 1714 aa20.15■□□□□ 0.82
LINC01088-201ENST00000437737 TUBGCP6Q96RT7 1819 aa20.15■□□□□ 0.82
LINC01088-201ENST00000437737 IFFO2Q5TF58 517 aa20.14■□□□□ 0.81
LINC01088-201ENST00000437737 AKT1S1Q96B36 256 aa20.14■□□□□ 0.81
LINC01088-201ENST00000437737 SLC27A3Q5K4L6 730 aa20.13■□□□□ 0.81
LINC01088-201ENST00000437737 ANKRD24Q8TF21 1146 aa20.13■□□□□ 0.81
LINC01088-201ENST00000437737 SHANK3Q9BYB0 1731 aa20.13■□□□□ 0.81
LINC01088-201ENST00000437737 USP31Q70CQ4 1352 aa20.12■□□□□ 0.81
LINC01088-201ENST00000437737 PNPLA7Q6ZV29 1317 aa20.12■□□□□ 0.81
LINC01088-201ENST00000437737 ROCK2O75116 1388 aaKnown RBP20.11■□□□□ 0.81
LINC01088-201ENST00000437737 TFCP2L1Q9NZI6 479 aa20.11■□□□□ 0.81
LINC01088-201ENST00000437737 NME9Q86XW9 330 aa20.1■□□□□ 0.81
LINC01088-201ENST00000437737 NLGN2Q8NFZ4 835 aa20.1■□□□□ 0.81
LINC01088-201ENST00000437737 DDX54Q8TDD1 881 aaKnown RBP20.1■□□□□ 0.81
LINC01088-201ENST00000437737 L3MBTL2Q969R5 705 aa20.1■□□□□ 0.81
LINC01088-201ENST00000437737 SYTL4Q96C24 671 aaPredicted RBP20.09■□□□□ 0.81
LINC01088-201ENST00000437737 DOT1LQ8TEK3 1739 aa20.09■□□□□ 0.81
LINC01088-201ENST00000437737 FAM208AQ9UK61 1670 aaKnown RBP20.07■□□□□ 0.8
LINC01088-201ENST00000437737 KCNQ4P56696 695 aa20.07■□□□□ 0.8
LINC01088-201ENST00000437737 LY75O60449 1722 aa20.07■□□□□ 0.8
LINC01088-201ENST00000437737 GRIN3BO60391 1043 aa20.06■□□□□ 0.8
LINC01088-201ENST00000437737 MSH5O43196 834 aa20.05■□□□□ 0.8
LINC01088-201ENST00000437737 TMC1Q8TDI8 760 aa20.05■□□□□ 0.8
LINC01088-201ENST00000437737 SBNO2Q9Y2G9 1366 aa20.05■□□□□ 0.8
LINC01088-201ENST00000437737 YBX3P16989 372 aaKnown RBP eCLIP20.04■□□□□ 0.8
LINC01088-201ENST00000437737 HDGFL2Q7Z4V5 671 aaPredicted RBP20.04■□□□□ 0.8
LINC01088-201ENST00000437737 LTV1Q96GA3 475 aaPredicted RBP20.04■□□□□ 0.8
LINC01088-201ENST00000437737 CD163L1Q9NR16 1453 aa20.04■□□□□ 0.8
LINC01088-201ENST00000437737 PRIM1P49642 420 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms