RNA–Protein interactions for RNA: ENST00000437167.1

RGPD6-203, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-203ENST00000437167 PDXDC2PQ6P474 469 aa10.45□□□□□ -0.74
RGPD6-203ENST00000437167 CCDC116Q8IYX3 515 aa10.45□□□□□ -0.74
RGPD6-203ENST00000437167 IRF7Q92985 503 aa10.45□□□□□ -0.74
RGPD6-203ENST00000437167 LINC00528Q8N1L1 170 aa10.44□□□□□ -0.74
RGPD6-203ENST00000437167 SLC10A4Q96EP9 437 aa10.44□□□□□ -0.74
RGPD6-203ENST00000437167 EMILIN1Q9Y6C2 1016 aa10.44□□□□□ -0.74
RGPD6-203ENST00000437167 PPP2R2DQ66LE6 453 aa10.43□□□□□ -0.74
RGPD6-203ENST00000437167 NPAS3Q8IXF0 933 aa10.43□□□□□ -0.74
RGPD6-203ENST00000437167 GMPRP36959 345 aa10.42□□□□□ -0.74
RGPD6-203ENST00000437167 MEIOBQ8N635 442 aa10.42□□□□□ -0.74
RGPD6-203ENST00000437167 H3BM21 787 aa10.41□□□□□ -0.74
RGPD6-203ENST00000437167 PTK2Q05397 1052 aa10.41□□□□□ -0.74
RGPD6-203ENST00000437167 PNMA1Q8ND90 353 aa10.41□□□□□ -0.74
RGPD6-203ENST00000437167 PGPEP1Q9NXJ5 209 aa10.41□□□□□ -0.74
RGPD6-203ENST00000437167 STK17AQ9UEE5 414 aa10.41□□□□□ -0.74
RGPD6-203ENST00000437167 USP17L8P0C7I0 530 aa10.4□□□□□ -0.74
RGPD6-203ENST00000437167 PPP1R26Q5T8A7 1209 aaPredicted RBP10.4□□□□□ -0.74
RGPD6-203ENST00000437167 KCTD15Q96SI1 283 aaPredicted RBP10.4□□□□□ -0.74
RGPD6-203ENST00000437167 ZC3H4Q9UPT8 1303 aaKnown RBP10.39□□□□□ -0.75
RGPD6-203ENST00000437167 EPS8L1Q8TE68 723 aa10.39□□□□□ -0.75
RGPD6-203ENST00000437167 PCMTD1Q96MG8 357 aaPredicted RBP10.39□□□□□ -0.75
RGPD6-203ENST00000437167 TSEN34Q9BSV6 310 aaKnown RBP10.39□□□□□ -0.75
RGPD6-203ENST00000437167 CDV3Q9UKY7 258 aaKnown RBP10.39□□□□□ -0.75
RGPD6-203ENST00000437167 RFC5P40937 340 aa10.38□□□□□ -0.75
RGPD6-203ENST00000437167 CBLBQ13191 982 aa10.38□□□□□ -0.75
RGPD6-203ENST00000437167 IL27Q8NEV9 243 aa10.38□□□□□ -0.75
RGPD6-203ENST00000437167 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
RGPD6-203ENST00000437167 RAB15P59190 212 aa10.37□□□□□ -0.75
RGPD6-203ENST00000437167 ADAM32Q8TC27 787 aa10.37□□□□□ -0.75
RGPD6-203ENST00000437167 HMX1Q9NP08 348 aaPredicted RBP10.37□□□□□ -0.75
RGPD6-203ENST00000437167 DHX9Q08211 1270 aaKnown RBP10.36□□□□□ -0.75
RGPD6-203ENST00000437167 FIGNL2A6NMB9 653 aa10.34□□□□□ -0.75
RGPD6-203ENST00000437167 INTS6LQ5JSJ4 861 aaKnown RBP10.34□□□□□ -0.75
RGPD6-203ENST00000437167 DZIP3Q86Y13 1208 aaKnown RBP10.34□□□□□ -0.75
RGPD6-203ENST00000437167 GOPCQ9HD26 462 aa10.34□□□□□ -0.75
RGPD6-203ENST00000437167 DNMT3LQ9UJW3 386 aa10.34□□□□□ -0.75
RGPD6-203ENST00000437167 SOS2Q07890 1332 aaPredicted RBP10.33□□□□□ -0.76
RGPD6-203ENST00000437167 TTLL8A6PVC2 850 aa10.33□□□□□ -0.76
RGPD6-203ENST00000437167 OCSTAMPQ9BR26 566 aa10.33□□□□□ -0.76
RGPD6-203ENST00000437167 GPSM3Q9Y4H4 160 aa10.33□□□□□ -0.76
RGPD6-203ENST00000437167 FAM181BA6NEQ2 426 aa10.32□□□□□ -0.76
RGPD6-203ENST00000437167 NBPF20Q3BBV1 942 aa10.32□□□□□ -0.76
RGPD6-203ENST00000437167 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
RGPD6-203ENST00000437167 PPFIA3O75145 1194 aa10.31□□□□□ -0.76
RGPD6-203ENST00000437167 RELBQ01201 579 aa10.31□□□□□ -0.76
RGPD6-203ENST00000437167 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.31□□□□□ -0.76
RGPD6-203ENST00000437167 AGBL1Q96MI9 1066 aa10.31□□□□□ -0.76
RGPD6-203ENST00000437167 TMPRSS4Q9NRS4 437 aa10.3□□□□□ -0.76
RGPD6-203ENST00000437167 TMEM259Q4ZIN3 620 aa10.29□□□□□ -0.76
RGPD6-203ENST00000437167 Q6ZVU0 165 aa10.29□□□□□ -0.76
RGPD6-203ENST00000437167 SPINT1O43278 529 aa10.27□□□□□ -0.77
RGPD6-203ENST00000437167 POLMQ9NP87 494 aaPredicted RBP10.27□□□□□ -0.77
RGPD6-203ENST00000437167 TMEM132AQ24JP5 1023 aa10.26□□□□□ -0.77
RGPD6-203ENST00000437167 TRIM34Q9BYJ4 488 aa10.26□□□□□ -0.77
RGPD6-203ENST00000437167 ZNF395Q9H8N7 513 aaPredicted RBP10.26□□□□□ -0.77
RGPD6-203ENST00000437167 PTSQ03393 145 aa10.25□□□□□ -0.77
RGPD6-203ENST00000437167 ZNF784Q8NCA9 323 aaPredicted RBP10.25□□□□□ -0.77
RGPD6-203ENST00000437167 INSM2Q96T92 566 aaPredicted RBP10.25□□□□□ -0.77
RGPD6-203ENST00000437167 ERVH48-1M5A8F1 160 aa10.24□□□□□ -0.77
RGPD6-203ENST00000437167 VSIG8P0DPA2 414 aa10.24□□□□□ -0.77
RGPD6-203ENST00000437167 CTSOP43234 321 aaPredicted RBP10.24□□□□□ -0.77
RGPD6-203ENST00000437167 PCDHB9Q9Y5E1 797 aa10.24□□□□□ -0.77
RGPD6-203ENST00000437167 ZBBXA8MT70 800 aa10.21□□□□□ -0.77
RGPD6-203ENST00000437167 ADH1AP07327 375 aa10.21□□□□□ -0.77
RGPD6-203ENST00000437167 LORP23490 312 aaPredicted RBP10.21□□□□□ -0.77
RGPD6-203ENST00000437167 CYLDQ9NQC7 956 aa10.21□□□□□ -0.77
RGPD6-203ENST00000437167 ADD1P35611 737 aaKnown RBP10.2□□□□□ -0.78
RGPD6-203ENST00000437167 CCDC155Q8N6L0 562 aa10.2□□□□□ -0.78
RGPD6-203ENST00000437167 CDC14CA4D256 554 aa10.18□□□□□ -0.78
RGPD6-203ENST00000437167 ESPNB1AK53 854 aa10.18□□□□□ -0.78
RGPD6-203ENST00000437167 GIGYF1O75420 1035 aaPredicted RBP10.18□□□□□ -0.78
RGPD6-203ENST00000437167 FBXO45P0C2W1 286 aa10.18□□□□□ -0.78
RGPD6-203ENST00000437167 GJD4Q96KN9 370 aaPredicted RBP10.18□□□□□ -0.78
RGPD6-203ENST00000437167 LILRA1O75019 489 aa10.17□□□□□ -0.78
RGPD6-203ENST00000437167 PTGIRP43119 386 aa10.17□□□□□ -0.78
RGPD6-203ENST00000437167 SEPT12Q8IYM1 358 aa10.17□□□□□ -0.78
RGPD6-203ENST00000437167 TRIM52Q96A61 297 aa10.17□□□□□ -0.78
RGPD6-203ENST00000437167 CNTNAP3BQ96NU0 1288 aa10.17□□□□□ -0.78
RGPD6-203ENST00000437167 CNTNAP3Q9BZ76 1288 aa10.17□□□□□ -0.78
RGPD6-203ENST00000437167 GPR161Q8N6U8 529 aaKnown RBP10.16□□□□□ -0.78
RGPD6-203ENST00000437167 RNF217Q8TC41 542 aa10.16□□□□□ -0.78
RGPD6-203ENST00000437167 SLC35F4A4IF30 521 aa10.15□□□□□ -0.78
RGPD6-203ENST00000437167 VWA5B2Q8N398 1253 aa10.14□□□□□ -0.79
RGPD6-203ENST00000437167 MEN1O00255 615 aa10.13□□□□□ -0.79
RGPD6-203ENST00000437167 ITGA6P23229 1130 aa10.13□□□□□ -0.79
RGPD6-203ENST00000437167 FOXD4L5Q5VV16 416 aaPredicted RBP10.13□□□□□ -0.79
RGPD6-203ENST00000437167 COL25A1Q9BXS0 654 aaPredicted RBP10.13□□□□□ -0.79
RGPD6-203ENST00000437167 ZNF330Q9Y3S2 320 aaPredicted RBP10.13□□□□□ -0.79
RGPD6-203ENST00000437167 ATP5J2-PTCD1G3V325 749 aa10.12□□□□□ -0.79
RGPD6-203ENST00000437167 NR1H3Q13133 447 aa10.12□□□□□ -0.79
RGPD6-203ENST00000437167 SV2AQ7L0J3 742 aa10.12□□□□□ -0.79
RGPD6-203ENST00000437167 LYSMD3Q7Z3D4 306 aa10.12□□□□□ -0.79
RGPD6-203ENST00000437167 PRICKLE2Q7Z3G6 844 aa10.12□□□□□ -0.79
RGPD6-203ENST00000437167 KRT76Q01546 638 aa10.11□□□□□ -0.79
RGPD6-203ENST00000437167 RNF20Q5VTR2 975 aa10.11□□□□□ -0.79
RGPD6-203ENST00000437167 KDF1Q8NAX2 398 aaPredicted RBP10.11□□□□□ -0.79
RGPD6-203ENST00000437167 BANK1Q8NDB2 785 aa10.11□□□□□ -0.79
RGPD6-203ENST00000437167 ESF1Q9H501 851 aaKnown RBP10.11□□□□□ -0.79
RGPD6-203ENST00000437167 NDUFB9Q9Y6M9 179 aa10.11□□□□□ -0.79
RGPD6-203ENST00000437167 APBB1O00213 710 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms