RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 QRICH2Q9H0J4 1663 aa21.49■■□□□ 1.03
HDAC8-213ENST00000436675 AKAP12Q02952 1782 aa21.48■■□□□ 1.03
HDAC8-213ENST00000436675 RGPD5Q99666 1765 aa21.48■■□□□ 1.03
HDAC8-213ENST00000436675 WNK3Q9BYP7 1800 aa21.48■■□□□ 1.03
HDAC8-213ENST00000436675 MARCH10Q8NA82 808 aaPredicted RBP21.48■■□□□ 1.03
HDAC8-213ENST00000436675 AXIN2Q9Y2T1 843 aa21.48■■□□□ 1.03
HDAC8-213ENST00000436675 COL18A1P39060 1754 aa21.48■■□□□ 1.03
HDAC8-213ENST00000436675 USP6P35125 1406 aa21.47■■□□□ 1.03
HDAC8-213ENST00000436675 SLIT3O75094 1523 aa21.47■■□□□ 1.03
HDAC8-213ENST00000436675 SOX12O15370 315 aa21.47■■□□□ 1.03
HDAC8-213ENST00000436675 PROM2Q8N271 834 aa21.47■■□□□ 1.03
HDAC8-213ENST00000436675 ATF5Q9Y2D1 282 aaPredicted RBP21.46■■□□□ 1.03
HDAC8-213ENST00000436675 PIK3C2AO00443 1686 aa21.46■■□□□ 1.03
HDAC8-213ENST00000436675 BRD4O60885 1362 aaPredicted RBP21.45■■□□□ 1.02
HDAC8-213ENST00000436675 MYOM1P52179 1685 aa21.44■■□□□ 1.02
HDAC8-213ENST00000436675 WDR17Q8IZU2 1322 aa21.44■■□□□ 1.02
HDAC8-213ENST00000436675 CSB-PGBD3P0DP91 1061 aa21.43■■□□□ 1.02
HDAC8-213ENST00000436675 TXNRD1Q16881 649 aa21.41■■□□□ 1.02
HDAC8-213ENST00000436675 STK32BQ9NY57 414 aa21.41■■□□□ 1.02
HDAC8-213ENST00000436675 CPSF1Q10570 1443 aaKnown RBP21.4■■□□□ 1.02
HDAC8-213ENST00000436675 PTGER2P43116 358 aa21.4■■□□□ 1.02
HDAC8-213ENST00000436675 ARHGEF25Q86VW2 580 aa21.39■■□□□ 1.01
HDAC8-213ENST00000436675 CDCA7Q9BWT1 371 aaPredicted RBP21.39■■□□□ 1.01
HDAC8-213ENST00000436675 KAT6BQ8WYB5 2073 aa21.39■■□□□ 1.01
HDAC8-213ENST00000436675 TTC21BQ7Z4L5 1316 aa21.37■■□□□ 1.01
HDAC8-213ENST00000436675 EXOC5O00471 708 aa21.37■■□□□ 1.01
HDAC8-213ENST00000436675 SLC15A2Q16348 729 aa21.37■■□□□ 1.01
HDAC8-213ENST00000436675 CARD10Q9BWT7 1032 aa21.37■■□□□ 1.01
HDAC8-213ENST00000436675 FHDC1Q9C0D6 1143 aaPredicted RBP21.36■■□□□ 1.01
HDAC8-213ENST00000436675 EVC2Q86UK5 1308 aa21.35■■□□□ 1.01
HDAC8-213ENST00000436675 ZNF784Q8NCA9 323 aaPredicted RBP21.35■■□□□ 1.01
HDAC8-213ENST00000436675 KCNH5Q8NCM2 988 aa21.35■■□□□ 1.01
HDAC8-213ENST00000436675 ACSBG1Q96GR2 724 aa21.35■■□□□ 1.01
HDAC8-213ENST00000436675 SYT17Q9BSW7 474 aa21.34■■□□□ 1.01
HDAC8-213ENST00000436675 BCL9O00512 1426 aa21.34■■□□□ 1.01
HDAC8-213ENST00000436675 UTRNP46939 3433 aa21.33■■□□□ 1.01
HDAC8-213ENST00000436675 TRPM1Q7Z4N2 1603 aa21.33■■□□□ 1
HDAC8-213ENST00000436675 CHD4Q14839 1912 aa21.32■■□□□ 1
HDAC8-213ENST00000436675 ZNF692Q9BU19 519 aaPredicted RBP21.31■■□□□ 1
HDAC8-213ENST00000436675 MTFR1LQ9H019 292 aa21.31■■□□□ 1
HDAC8-213ENST00000436675 NFAT5O94916 1531 aa21.3■■□□□ 1
HDAC8-213ENST00000436675 CCDC7Q96M83 1385 aa21.3■■□□□ 1
HDAC8-213ENST00000436675 NHSQ6T4R5 1651 aa21.29■■□□□ 1
HDAC8-213ENST00000436675 L3MBTL2Q969R5 705 aa21.29■■□□□ 1
HDAC8-213ENST00000436675 TNS2Q63HR2 1409 aa21.29■■□□□ 1
HDAC8-213ENST00000436675 TTC21AQ8NDW8 1320 aa21.29■■□□□ 1
HDAC8-213ENST00000436675 KTN1Q86UP2 1357 aaKnown RBP21.28■■□□□ 1
HDAC8-213ENST00000436675 NLRP2Q9NX02 1062 aa21.28■■□□□ 1
HDAC8-213ENST00000436675 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.27■■□□□ 1
HDAC8-213ENST00000436675 SGIP1Q9BQI5 828 aa21.27■■□□□ 1
HDAC8-213ENST00000436675 BTAF1O14981 1849 aa21.27■□□□□ 0.99
HDAC8-213ENST00000436675 ARXQ96QS3 562 aa21.26■□□□□ 0.99
HDAC8-213ENST00000436675 SENP3-EIF4A1A0A087X0R7 540 aa21.24■□□□□ 0.99
HDAC8-213ENST00000436675 LTN1O94822 1766 aa21.23■□□□□ 0.99
HDAC8-213ENST00000436675 ZNF827Q17R98 1081 aa21.23■□□□□ 0.99
HDAC8-213ENST00000436675 KLHL34Q8N239 644 aa21.23■□□□□ 0.99
HDAC8-213ENST00000436675 MON2Q7Z3U7 1717 aa21.23■□□□□ 0.99
HDAC8-213ENST00000436675 ROCK2O75116 1388 aaKnown RBP21.23■□□□□ 0.99
HDAC8-213ENST00000436675 PAPPAQ13219 1627 aa21.22■□□□□ 0.99
HDAC8-213ENST00000436675 IL2RBP14784 551 aa21.22■□□□□ 0.99
HDAC8-213ENST00000436675 SIN3AQ96ST3 1273 aa21.22■□□□□ 0.99
HDAC8-213ENST00000436675 ABCC6O95255 1503 aa21.22■□□□□ 0.99
HDAC8-213ENST00000436675 NME9Q86XW9 330 aa21.21■□□□□ 0.99
HDAC8-213ENST00000436675 ERBB3P21860 1342 aa21.21■□□□□ 0.99
HDAC8-213ENST00000436675 GPR162Q16538 588 aa21.2■□□□□ 0.98
HDAC8-213ENST00000436675 LRRC4BQ9NT99 713 aa21.2■□□□□ 0.98
HDAC8-213ENST00000436675 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
HDAC8-213ENST00000436675 ANKRD24Q8TF21 1146 aa21.19■□□□□ 0.98
HDAC8-213ENST00000436675 PELP1Q8IZL8 1130 aaKnown RBP21.18■□□□□ 0.98
HDAC8-213ENST00000436675 C1QTNF8P60827 252 aa21.17■□□□□ 0.98
HDAC8-213ENST00000436675 TMC1Q8TDI8 760 aa21.17■□□□□ 0.98
HDAC8-213ENST00000436675 USP31Q70CQ4 1352 aa21.16■□□□□ 0.98
HDAC8-213ENST00000436675 DDX54Q8TDD1 881 aaKnown RBP21.16■□□□□ 0.98
HDAC8-213ENST00000436675 KCNQ4P56696 695 aa21.15■□□□□ 0.98
HDAC8-213ENST00000436675 LTV1Q96GA3 475 aaPredicted RBP21.14■□□□□ 0.97
HDAC8-213ENST00000436675 USP54Q70EL1 1684 aa21.14■□□□□ 0.97
HDAC8-213ENST00000436675 MAP3K5Q99683 1374 aa21.13■□□□□ 0.97
HDAC8-213ENST00000436675 SBNO2Q9Y2G9 1366 aa21.13■□□□□ 0.97
HDAC8-213ENST00000436675 AKT1S1Q96B36 256 aa21.13■□□□□ 0.97
HDAC8-213ENST00000436675 TUBGCP6Q96RT7 1819 aa21.13■□□□□ 0.97
HDAC8-213ENST00000436675 CD163L1Q9NR16 1453 aa21.13■□□□□ 0.97
HDAC8-213ENST00000436675 POLD1P28340 1107 aa21.12■□□□□ 0.97
HDAC8-213ENST00000436675 SYTL4Q96C24 671 aaPredicted RBP21.12■□□□□ 0.97
HDAC8-213ENST00000436675 GOLGB1Q14789 3259 aaKnown RBP21.12■□□□□ 0.97
HDAC8-213ENST00000436675 HDGFL2Q7Z4V5 671 aaPredicted RBP21.11■□□□□ 0.97
HDAC8-213ENST00000436675 SLC12A5Q9H2X9 1139 aa21.11■□□□□ 0.97
HDAC8-213ENST00000436675 PNPLA7Q6ZV29 1317 aa21.1■□□□□ 0.97
HDAC8-213ENST00000436675 QSER1Q2KHR3 1735 aa21.1■□□□□ 0.97
HDAC8-213ENST00000436675 TFCP2L1Q9NZI6 479 aa21.1■□□□□ 0.97
HDAC8-213ENST00000436675 NLGN2Q8NFZ4 835 aa21.09■□□□□ 0.97
HDAC8-213ENST00000436675 SLC16A10Q8TF71 515 aa21.09■□□□□ 0.97
HDAC8-213ENST00000436675 SLC27A3Q5K4L6 730 aa21.08■□□□□ 0.97
HDAC8-213ENST00000436675 DOT1LQ8TEK3 1739 aa21.07■□□□□ 0.96
HDAC8-213ENST00000436675 GIGYF1O75420 1035 aaPredicted RBP21.07■□□□□ 0.96
HDAC8-213ENST00000436675 PRIM1P49642 420 aaKnown RBP21.07■□□□□ 0.96
HDAC8-213ENST00000436675 RGPD2P0DJD1 1756 aa21.06■□□□□ 0.96
HDAC8-213ENST00000436675 IP6K1Q92551 441 aa21.06■□□□□ 0.96
HDAC8-213ENST00000436675 COL24A1Q17RW2 1714 aa21.06■□□□□ 0.96
HDAC8-213ENST00000436675 EDC4Q6P2E9 1401 aaKnown RBP21.05■□□□□ 0.96
HDAC8-213ENST00000436675 MSH5O43196 834 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms