RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 LMO7Q8WWI1 1683 aa22.68■■□□□ 1.22
CALD1-209ENST00000436461 HOXC9P31274 260 aa22.68■■□□□ 1.22
CALD1-209ENST00000436461 C8orf37Q96NL8 207 aa22.68■■□□□ 1.22
CALD1-209ENST00000436461 COL14A1Q05707 1796 aaKnown RBP22.67■■□□□ 1.22
CALD1-209ENST00000436461 HSP90AB2PQ58FF8 381 aa22.67■■□□□ 1.22
CALD1-209ENST00000436461 CCDC184Q52MB2 194 aa22.66■■□□□ 1.22
CALD1-209ENST00000436461 MEX3CQ5U5Q3 659 aaKnown RBP22.66■■□□□ 1.22
CALD1-209ENST00000436461 FLT4P35916 1363 aa22.66■■□□□ 1.22
CALD1-209ENST00000436461 CAMTA1Q9Y6Y1 1673 aa22.65■■□□□ 1.22
CALD1-209ENST00000436461 CDK12Q9NYV4 1490 aaPredicted RBP22.65■■□□□ 1.22
CALD1-209ENST00000436461 IP6K1Q92551 441 aa22.64■■□□□ 1.22
CALD1-209ENST00000436461 LTV1Q96GA3 475 aaPredicted RBP22.64■■□□□ 1.21
CALD1-209ENST00000436461 BTG4Q9NY30 223 aa22.63■■□□□ 1.21
CALD1-209ENST00000436461 RTL1A6NKG5 1358 aa22.63■■□□□ 1.21
CALD1-209ENST00000436461 RGPD2P0DJD1 1756 aa22.62■■□□□ 1.21
CALD1-209ENST00000436461 NGLY1Q96IV0 654 aa22.61■■□□□ 1.21
CALD1-209ENST00000436461 COL3A1P02461 1466 aaPredicted RBP22.61■■□□□ 1.21
CALD1-209ENST00000436461 NRAPQ86VF7 1730 aa22.6■■□□□ 1.21
CALD1-209ENST00000436461 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
CALD1-209ENST00000436461 STRN4Q9NRL3 753 aa22.6■■□□□ 1.21
CALD1-209ENST00000436461 ABCC6O95255 1503 aa22.59■■□□□ 1.21
CALD1-209ENST00000436461 COL5A2P05997 1499 aaPredicted RBP22.59■■□□□ 1.21
CALD1-209ENST00000436461 BLMP54132 1417 aaPredicted RBP22.59■■□□□ 1.21
CALD1-209ENST00000436461 INSRP06213 1382 aa22.59■■□□□ 1.21
CALD1-209ENST00000436461 SLIT2O94813 1529 aa22.59■■□□□ 1.21
CALD1-209ENST00000436461 NWD2Q9ULI1 1742 aa22.58■■□□□ 1.21
CALD1-209ENST00000436461 EIF4A2Q14240 407 aaKnown RBP22.58■■□□□ 1.21
CALD1-209ENST00000436461 ANKRD24Q8TF21 1146 aa22.58■■□□□ 1.21
CALD1-209ENST00000436461 ERBB3P21860 1342 aa22.57■■□□□ 1.2
CALD1-209ENST00000436461 CFAP53Q96M91 514 aa22.57■■□□□ 1.2
CALD1-209ENST00000436461 MRS2Q9HD23 443 aa22.56■■□□□ 1.2
CALD1-209ENST00000436461 AFF2P51816 1311 aa22.55■■□□□ 1.2
CALD1-209ENST00000436461 BCL9LQ86UU0 1499 aa22.54■■□□□ 1.2
CALD1-209ENST00000436461 DIAPH1O60610 1272 aaKnown RBP22.54■■□□□ 1.2
CALD1-209ENST00000436461 CSB-PGBD3P0DP91 1061 aa22.54■■□□□ 1.2
CALD1-209ENST00000436461 EVA1CP58658 441 aa22.54■■□□□ 1.2
CALD1-209ENST00000436461 FNBP4Q8N3X1 1017 aaPredicted RBP22.54■■□□□ 1.2
CALD1-209ENST00000436461 IL13P35225 146 aa22.53■■□□□ 1.2
CALD1-209ENST00000436461 LARP1Q6PKG0 1096 aaKnown RBP22.53■■□□□ 1.2
CALD1-209ENST00000436461 USP21Q9UK80 565 aa22.53■■□□□ 1.2
CALD1-209ENST00000436461 USHBP1Q8N6Y0 703 aa22.52■■□□□ 1.2
CALD1-209ENST00000436461 U2SURPO15042 1029 aaKnown RBP22.51■■□□□ 1.19
CALD1-209ENST00000436461 UNC5CLQ8IV45 518 aa22.51■■□□□ 1.19
CALD1-209ENST00000436461 RGPD1P0DJD0 1748 aa22.51■■□□□ 1.19
CALD1-209ENST00000436461 WDR17Q8IZU2 1322 aa22.51■■□□□ 1.19
CALD1-209ENST00000436461 NBPF6Q5VWK0 638 aa22.5■■□□□ 1.19
CALD1-209ENST00000436461 NBPF4Q96M43 638 aa22.5■■□□□ 1.19
CALD1-209ENST00000436461 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.5■■□□□ 1.19
CALD1-209ENST00000436461 FAM208AQ9UK61 1670 aaKnown RBP22.5■■□□□ 1.19
CALD1-209ENST00000436461 TOM1L2Q6ZVM7 507 aa22.49■■□□□ 1.19
CALD1-209ENST00000436461 EYA1Q99502 592 aa22.49■■□□□ 1.19
CALD1-209ENST00000436461 NLRP2Q9NX02 1062 aa22.49■■□□□ 1.19
CALD1-209ENST00000436461 USP35Q9P2H5 1018 aa22.49■■□□□ 1.19
CALD1-209ENST00000436461 CCER2I3L3R5 266 aa22.48■■□□□ 1.19
CALD1-209ENST00000436461 CCDC9Q9Y3X0 531 aaKnown RBP22.47■■□□□ 1.19
CALD1-209ENST00000436461 CRB1P82279 1406 aa22.46■■□□□ 1.19
CALD1-209ENST00000436461 HMOX1P09601 288 aa22.46■■□□□ 1.19
CALD1-209ENST00000436461 AEBP1Q8IUX7 1158 aa22.46■■□□□ 1.19
CALD1-209ENST00000436461 U2AF1L5P0DN76 240 aaPredicted RBP22.45■■□□□ 1.18
CALD1-209ENST00000436461 U2AF1Q01081 240 aaKnown RBP eCLIP22.45■■□□□ 1.18
CALD1-209ENST00000436461 NUDCQ9Y266 331 aa22.45■■□□□ 1.18
CALD1-209ENST00000436461 IGSF1Q8N6C5 1336 aa22.45■■□□□ 1.18
CALD1-209ENST00000436461 SULT6B1Q6IMI4 303 aa22.44■■□□□ 1.18
CALD1-209ENST00000436461 PNISRQ8TF01 805 aaKnown RBP22.43■■□□□ 1.18
CALD1-209ENST00000436461 WDR43Q15061 677 aaKnown RBP eCLIP22.42■■□□□ 1.18
CALD1-209ENST00000436461 VPS72Q15906 364 aa22.42■■□□□ 1.18
CALD1-209ENST00000436461 FAM9BQ8IZU0 186 aa22.42■■□□□ 1.18
CALD1-209ENST00000436461 RGS17Q9UGC6 210 aaPredicted RBP22.42■■□□□ 1.18
CALD1-209ENST00000436461 PHF23Q9BUL5 403 aaPredicted RBP22.42■■□□□ 1.18
CALD1-209ENST00000436461 CARD10Q9BWT7 1032 aa22.42■■□□□ 1.18
CALD1-209ENST00000436461 ADAMTS8Q9UP79 889 aa22.42■■□□□ 1.18
CALD1-209ENST00000436461 SPATA31A1Q5TZJ5 1347 aa22.42■■□□□ 1.18
CALD1-209ENST00000436461 SPATA31A5Q5VU36 1347 aa22.42■■□□□ 1.18
CALD1-209ENST00000436461 SPATA31A7Q8IWB4 1347 aa22.42■■□□□ 1.18
CALD1-209ENST00000436461 ATRNO75882 1429 aa22.42■■□□□ 1.18
CALD1-209ENST00000436461 QTRT2Q9H974 415 aaKnown RBP22.41■■□□□ 1.18
CALD1-209ENST00000436461 GLI3P10071 1580 aa22.4■■□□□ 1.18
CALD1-209ENST00000436461 TRPC5Q9UL62 973 aaPredicted RBP22.4■■□□□ 1.18
CALD1-209ENST00000436461 WNK3Q9BYP7 1800 aa22.4■■□□□ 1.18
CALD1-209ENST00000436461 NCAPD2Q15021 1401 aa22.39■■□□□ 1.18
CALD1-209ENST00000436461 ZNF772Q68DY9 489 aaPredicted RBP22.39■■□□□ 1.17
CALD1-209ENST00000436461 MEGF6O75095 1541 aa22.38■■□□□ 1.17
CALD1-209ENST00000436461 KDRP35968 1356 aa22.37■■□□□ 1.17
CALD1-209ENST00000436461 CCDC146Q8IYE0 955 aa22.37■■□□□ 1.17
CALD1-209ENST00000436461 TCP11L2Q8N4U5 519 aa22.37■■□□□ 1.17
CALD1-209ENST00000436461 GJD4Q96KN9 370 aaPredicted RBP22.37■■□□□ 1.17
CALD1-209ENST00000436461 RSPH6AQ9H0K4 717 aa22.37■■□□□ 1.17
CALD1-209ENST00000436461 SENP3-EIF4A1A0A087X0R7 540 aa22.35■■□□□ 1.17
CALD1-209ENST00000436461 PRKAR2BP31323 418 aa22.35■■□□□ 1.17
CALD1-209ENST00000436461 FAM98CQ17RN3 349 aaKnown RBP22.35■■□□□ 1.17
CALD1-209ENST00000436461 POTEAQ6S8J7 498 aa22.35■■□□□ 1.17
CALD1-209ENST00000436461 PARP4Q9UKK3 1724 aaKnown RBP22.33■■□□□ 1.17
CALD1-209ENST00000436461 DISP2A7MBM2 1401 aa22.32■■□□□ 1.16
CALD1-209ENST00000436461 IL2RBP14784 551 aa22.32■■□□□ 1.16
CALD1-209ENST00000436461 RAPGEF4Q8WZA2 1011 aa22.32■■□□□ 1.16
CALD1-209ENST00000436461 FCHSD2O94868 740 aa22.31■■□□□ 1.16
CALD1-209ENST00000436461 PHACTR3Q96KR7 559 aa22.31■■□□□ 1.16
CALD1-209ENST00000436461 THRAP3Q9Y2W1 955 aaKnown RBP22.31■■□□□ 1.16
CALD1-209ENST00000436461 PLEKHF1Q96S99 279 aa22.31■■□□□ 1.16
CALD1-209ENST00000436461 A0A0G2JS52 829 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms