RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 TTC21BQ7Z4L5 1316 aa15.74■□□□□ 0.11
SPTLC1P4-201ENST00000435997 ARHGEF25Q86VW2 580 aa15.74■□□□□ 0.11
SPTLC1P4-201ENST00000435997 WDR17Q8IZU2 1322 aa15.73■□□□□ 0.11
SPTLC1P4-201ENST00000435997 TTC21AQ8NDW8 1320 aa15.73■□□□□ 0.11
SPTLC1P4-201ENST00000435997 AKAP12Q02952 1782 aa15.73■□□□□ 0.11
SPTLC1P4-201ENST00000435997 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
SPTLC1P4-201ENST00000435997 AXIN2Q9Y2T1 843 aa15.73■□□□□ 0.11
SPTLC1P4-201ENST00000435997 RGPD3A6NKT7 1758 aaPredicted RBP15.72■□□□□ 0.11
SPTLC1P4-201ENST00000435997 RGPD4Q7Z3J3 1758 aa15.72■□□□□ 0.11
SPTLC1P4-201ENST00000435997 CD163L1Q9NR16 1453 aa15.71■□□□□ 0.11
SPTLC1P4-201ENST00000435997 WNK3Q9BYP7 1800 aa15.71■□□□□ 0.11
SPTLC1P4-201ENST00000435997 USP54Q70EL1 1684 aa15.71■□□□□ 0.11
SPTLC1P4-201ENST00000435997 TOM1L2Q6ZVM7 507 aa15.7■□□□□ 0.1
SPTLC1P4-201ENST00000435997 KCNH5Q8NCM2 988 aa15.7■□□□□ 0.1
SPTLC1P4-201ENST00000435997 MON2Q7Z3U7 1717 aa15.69■□□□□ 0.1
SPTLC1P4-201ENST00000435997 DDB1Q16531 1140 aa15.69■□□□□ 0.1
SPTLC1P4-201ENST00000435997 CDCA7Q9BWT1 371 aaPredicted RBP15.69■□□□□ 0.1
SPTLC1P4-201ENST00000435997 USP31Q70CQ4 1352 aa15.69■□□□□ 0.1
SPTLC1P4-201ENST00000435997 KTN1Q86UP2 1357 aaKnown RBP15.68■□□□□ 0.1
SPTLC1P4-201ENST00000435997 ZBTB7CA1YPR0 619 aa15.68■□□□□ 0.1
SPTLC1P4-201ENST00000435997 CARD10Q9BWT7 1032 aa15.68■□□□□ 0.1
SPTLC1P4-201ENST00000435997 PLSCR1O15162 318 aa15.67■□□□□ 0.1
SPTLC1P4-201ENST00000435997 NEUROD1Q13562 356 aa15.67■□□□□ 0.1
SPTLC1P4-201ENST00000435997 TNS2Q63HR2 1409 aa15.67■□□□□ 0.1
SPTLC1P4-201ENST00000435997 NBPF14Q5TI25 921 aa15.66■□□□□ 0.1
SPTLC1P4-201ENST00000435997 MARCH10Q8NA82 808 aaPredicted RBP15.66■□□□□ 0.1
SPTLC1P4-201ENST00000435997 BCL11BQ9C0K0 894 aaPredicted RBP15.66■□□□□ 0.1
SPTLC1P4-201ENST00000435997 CCDC7Q96M83 1385 aa15.65■□□□□ 0.1
SPTLC1P4-201ENST00000435997 PTF1AQ7RTS3 328 aa15.65■□□□□ 0.1
SPTLC1P4-201ENST00000435997 ANO8Q9HCE9 1232 aaPredicted RBP15.65■□□□□ 0.1
SPTLC1P4-201ENST00000435997 SBF2Q86WG5 1849 aa15.64■□□□□ 0.09
SPTLC1P4-201ENST00000435997 ERBB3P21860 1342 aa15.64■□□□□ 0.09
SPTLC1P4-201ENST00000435997 EDC4Q6P2E9 1401 aaKnown RBP15.63■□□□□ 0.09
SPTLC1P4-201ENST00000435997 CASZ1Q86V15 1759 aa15.62■□□□□ 0.09
SPTLC1P4-201ENST00000435997 SOX12O15370 315 aa15.62■□□□□ 0.09
SPTLC1P4-201ENST00000435997 PROM2Q8N271 834 aa15.62■□□□□ 0.09
SPTLC1P4-201ENST00000435997 CARD11Q9BXL7 1154 aa15.62■□□□□ 0.09
SPTLC1P4-201ENST00000435997 A0A1W2PP64 1363 aa15.62■□□□□ 0.09
SPTLC1P4-201ENST00000435997 CSB-PGBD3P0DP91 1061 aa15.61■□□□□ 0.09
SPTLC1P4-201ENST00000435997 NME9Q86XW9 330 aa15.61■□□□□ 0.09
SPTLC1P4-201ENST00000435997 NINLQ9Y2I6 1382 aa15.61■□□□□ 0.09
SPTLC1P4-201ENST00000435997 PUS7Q96PZ0 661 aaKnown RBP15.6■□□□□ 0.09
SPTLC1P4-201ENST00000435997 SPON1Q9HCB6 807 aa15.6■□□□□ 0.09
SPTLC1P4-201ENST00000435997 RGPD5Q99666 1765 aa15.59■□□□□ 0.09
SPTLC1P4-201ENST00000435997 KCNQ2O43526 872 aa15.59■□□□□ 0.09
SPTLC1P4-201ENST00000435997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.59■□□□□ 0.09
SPTLC1P4-201ENST00000435997 NHSQ6T4R5 1651 aa15.58■□□□□ 0.08
SPTLC1P4-201ENST00000435997 EXOC5O00471 708 aa15.57■□□□□ 0.08
SPTLC1P4-201ENST00000435997 TESK2Q96S53 571 aa15.57■□□□□ 0.08
SPTLC1P4-201ENST00000435997 SLC12A5Q9H2X9 1139 aa15.57■□□□□ 0.08
SPTLC1P4-201ENST00000435997 TONSLQ96HA7 1378 aa15.57■□□□□ 0.08
SPTLC1P4-201ENST00000435997 TXNRD1Q16881 649 aa15.56■□□□□ 0.08
SPTLC1P4-201ENST00000435997 HDGFL2Q7Z4V5 671 aaPredicted RBP15.56■□□□□ 0.08
SPTLC1P4-201ENST00000435997 PAPPAQ13219 1627 aa15.56■□□□□ 0.08
SPTLC1P4-201ENST00000435997 PDGFDQ9GZP0 370 aaPredicted RBP15.55■□□□□ 0.08
SPTLC1P4-201ENST00000435997 LTN1O94822 1766 aa15.54■□□□□ 0.08
SPTLC1P4-201ENST00000435997 IL2RBP14784 551 aa15.54■□□□□ 0.08
SPTLC1P4-201ENST00000435997 TMC1Q8TDI8 760 aa15.54■□□□□ 0.08
SPTLC1P4-201ENST00000435997 TERF2IPQ9NYB0 399 aa15.54■□□□□ 0.08
SPTLC1P4-201ENST00000435997 PTGER2P43116 358 aa15.53■□□□□ 0.08
SPTLC1P4-201ENST00000435997 ANKRD24Q8TF21 1146 aa15.53■□□□□ 0.08
SPTLC1P4-201ENST00000435997 NLRP2Q9NX02 1062 aa15.53■□□□□ 0.08
SPTLC1P4-201ENST00000435997 UTRNP46939 3433 aa15.52■□□□□ 0.08
SPTLC1P4-201ENST00000435997 SLC15A2Q16348 729 aa15.51■□□□□ 0.07
SPTLC1P4-201ENST00000435997 IP6K1Q92551 441 aa15.51■□□□□ 0.07
SPTLC1P4-201ENST00000435997 PPP1R1BQ9UD71 204 aaPredicted RBP15.51■□□□□ 0.07
SPTLC1P4-201ENST00000435997 MYOM1P52179 1685 aa15.51■□□□□ 0.07
SPTLC1P4-201ENST00000435997 SGIP1Q9BQI5 828 aa15.5■□□□□ 0.07
SPTLC1P4-201ENST00000435997 FAM208AQ9UK61 1670 aaKnown RBP15.5■□□□□ 0.07
SPTLC1P4-201ENST00000435997 ANKRD36BQ8N2N9 1353 aa15.49■□□□□ 0.07
SPTLC1P4-201ENST00000435997 ST20-MTHFSA0A0A6YYL1 179 aa15.49■□□□□ 0.07
SPTLC1P4-201ENST00000435997 ZBTB7AO95365 584 aa15.49■□□□□ 0.07
SPTLC1P4-201ENST00000435997 STK32BQ9NY57 414 aa15.49■□□□□ 0.07
SPTLC1P4-201ENST00000435997 MAP3K19Q56UN5 1328 aa15.48■□□□□ 0.07
SPTLC1P4-201ENST00000435997 ACSBG1Q96GR2 724 aa15.48■□□□□ 0.07
SPTLC1P4-201ENST00000435997 RTL1A6NKG5 1358 aa15.48■□□□□ 0.07
SPTLC1P4-201ENST00000435997 MTFR1LQ9H019 292 aa15.47■□□□□ 0.07
SPTLC1P4-201ENST00000435997 BTAF1O14981 1849 aa15.46■□□□□ 0.07
SPTLC1P4-201ENST00000435997 SLC24A1O60721 1099 aa15.46■□□□□ 0.07
SPTLC1P4-201ENST00000435997 YY1P25490 414 aa15.46■□□□□ 0.07
SPTLC1P4-201ENST00000435997 HOXC9P31274 260 aa15.46■□□□□ 0.07
SPTLC1P4-201ENST00000435997 NSD2O96028 1365 aa15.46■□□□□ 0.07
SPTLC1P4-201ENST00000435997 MEGF6O75095 1541 aa15.45■□□□□ 0.06
SPTLC1P4-201ENST00000435997 ZNF827Q17R98 1081 aa15.45■□□□□ 0.06
SPTLC1P4-201ENST00000435997 COG3Q96JB2 828 aa15.45■□□□□ 0.06
SPTLC1P4-201ENST00000435997 LRRC4BQ9NT99 713 aa15.45■□□□□ 0.06
SPTLC1P4-201ENST00000435997 MAP3K5Q99683 1374 aa15.45■□□□□ 0.06
SPTLC1P4-201ENST00000435997 USP47Q96K76 1375 aa15.44■□□□□ 0.06
SPTLC1P4-201ENST00000435997 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
SPTLC1P4-201ENST00000435997 SHANK3Q9BYB0 1731 aa15.43■□□□□ 0.06
SPTLC1P4-201ENST00000435997 FBLN1P23142 703 aa15.42■□□□□ 0.06
SPTLC1P4-201ENST00000435997 SLC27A3Q5K4L6 730 aa15.42■□□□□ 0.06
SPTLC1P4-201ENST00000435997 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
SPTLC1P4-201ENST00000435997 SYT17Q9BSW7 474 aa15.42■□□□□ 0.06
SPTLC1P4-201ENST00000435997 LTV1Q96GA3 475 aaPredicted RBP15.41■□□□□ 0.06
SPTLC1P4-201ENST00000435997 FHDC1Q9C0D6 1143 aaPredicted RBP15.41■□□□□ 0.06
SPTLC1P4-201ENST00000435997 FYB1O15117 783 aa15.4■□□□□ 0.06
SPTLC1P4-201ENST00000435997 KIF24Q5T7B8 1368 aa15.39■□□□□ 0.05
SPTLC1P4-201ENST00000435997 AMPHP49418 695 aa15.39■□□□□ 0.05
SPTLC1P4-201ENST00000435997 DDX54Q8TDD1 881 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms