RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 MINK1Q8N4C8 1332 aaPredicted RBP15.51■□□□□ 0.07
CPNE1-214ENST00000435747 POLD1P28340 1107 aa15.51■□□□□ 0.07
CPNE1-214ENST00000435747 ITSN1Q15811 1721 aa15.51■□□□□ 0.07
CPNE1-214ENST00000435747 BCL9O00512 1426 aa15.51■□□□□ 0.07
CPNE1-214ENST00000435747 CFAP70Q5T0N1 1121 aa15.5■□□□□ 0.07
CPNE1-214ENST00000435747 WASLO00401 505 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-214ENST00000435747 MARCH10Q8NA82 808 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-214ENST00000435747 NLGN2Q8NFZ4 835 aa15.49■□□□□ 0.07
CPNE1-214ENST00000435747 ZNF526Q8TF50 670 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-214ENST00000435747 WNK3Q9BYP7 1800 aa15.48■□□□□ 0.07
CPNE1-214ENST00000435747 YBX3P16989 372 aaKnown RBP eCLIP15.48■□□□□ 0.072e-6■■■■□ 21.8
CPNE1-214ENST00000435747 KAT6BQ8WYB5 2073 aa15.47■□□□□ 0.07
CPNE1-214ENST00000435747 APLP1P51693 650 aa15.47■□□□□ 0.07
CPNE1-214ENST00000435747 PAPPAQ13219 1627 aa15.46■□□□□ 0.07
CPNE1-214ENST00000435747 PRELPP51888 382 aa15.46■□□□□ 0.07
CPNE1-214ENST00000435747 COL13A1Q5TAT6 717 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-214ENST00000435747 TOM1L2Q6ZVM7 507 aa15.45■□□□□ 0.06
CPNE1-214ENST00000435747 ABTB2Q8N961 1025 aa15.45■□□□□ 0.06
CPNE1-214ENST00000435747 SLC16A10Q8TF71 515 aa15.45■□□□□ 0.06
CPNE1-214ENST00000435747 CDCA7Q9BWT1 371 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-214ENST00000435747 COL24A1Q17RW2 1714 aa15.44■□□□□ 0.06
CPNE1-214ENST00000435747 ZBTB7CA1YPR0 619 aa15.44■□□□□ 0.06
CPNE1-214ENST00000435747 ZNF827Q17R98 1081 aa15.44■□□□□ 0.06
CPNE1-214ENST00000435747 TRAK1Q9UPV9 953 aa15.44■□□□□ 0.06
CPNE1-214ENST00000435747 USP19O94966 1318 aa15.43■□□□□ 0.06
CPNE1-214ENST00000435747 TNS4Q8IZW8 715 aa15.43■□□□□ 0.06
CPNE1-214ENST00000435747 ADCY9O60503 1353 aa15.43■□□□□ 0.06
CPNE1-214ENST00000435747 GCP02774 474 aa15.42■□□□□ 0.06
CPNE1-214ENST00000435747 DNAJC5GQ8N7S2 189 aa15.42■□□□□ 0.06
CPNE1-214ENST00000435747 NUDT16Q96DE0 195 aaKnown RBP15.42■□□□□ 0.06
CPNE1-214ENST00000435747 QSER1Q2KHR3 1735 aa15.42■□□□□ 0.06
CPNE1-214ENST00000435747 SLC34A2O95436 690 aa15.41■□□□□ 0.06
CPNE1-214ENST00000435747 NHSQ6T4R5 1651 aa15.41■□□□□ 0.06
CPNE1-214ENST00000435747 NLRP13Q86W25 1043 aa15.4■□□□□ 0.06
CPNE1-214ENST00000435747 POLR3AO14802 1390 aaPredicted RBP15.39■□□□□ 0.05
CPNE1-214ENST00000435747 ACEP12821 1306 aa15.39■□□□□ 0.05
CPNE1-214ENST00000435747 PCNTO95613 3336 aa15.38■□□□□ 0.05
CPNE1-214ENST00000435747 EXOC5O00471 708 aa15.38■□□□□ 0.05
CPNE1-214ENST00000435747 KIF3CO14782 793 aa15.38■□□□□ 0.05
CPNE1-214ENST00000435747 WDR17Q8IZU2 1322 aa15.38■□□□□ 0.05
CPNE1-214ENST00000435747 ADGRB1O14514 1584 aa15.37■□□□□ 0.05
CPNE1-214ENST00000435747 ACSBG1Q96GR2 724 aa15.37■□□□□ 0.05
CPNE1-214ENST00000435747 MPHOSPH9Q99550 1183 aa15.37■□□□□ 0.05
CPNE1-214ENST00000435747 BTAF1O14981 1849 aa15.37■□□□□ 0.05
CPNE1-214ENST00000435747 BRD4O60885 1362 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-214ENST00000435747 AKT1S1Q96B36 256 aa15.36■□□□□ 0.05
CPNE1-214ENST00000435747 PNPLA7Q6ZV29 1317 aa15.36■□□□□ 0.05
CPNE1-214ENST00000435747 TUBGCP6Q96RT7 1819 aa15.36■□□□□ 0.05
CPNE1-214ENST00000435747 LRRC4BQ9NT99 713 aa15.35■□□□□ 0.05
CPNE1-214ENST00000435747 TFCP2L1Q9NZI6 479 aa15.34■□□□□ 0.05
CPNE1-214ENST00000435747 WDR90Q96KV7 1748 aa15.34■□□□□ 0.05
CPNE1-214ENST00000435747 USP6P35125 1406 aa15.34■□□□□ 0.05
CPNE1-214ENST00000435747 TNS2Q63HR2 1409 aa15.34■□□□□ 0.05
CPNE1-214ENST00000435747 COL18A1P39060 1754 aa15.33■□□□□ 0.04
CPNE1-214ENST00000435747 PLEKHG3A1L390 1219 aa15.32■□□□□ 0.04
CPNE1-214ENST00000435747 CSB-PGBD3P0DP91 1061 aa15.32■□□□□ 0.04
CPNE1-214ENST00000435747 CARD10Q9BWT7 1032 aa15.32■□□□□ 0.04
CPNE1-214ENST00000435747 CCDC61Q9Y6R9 512 aa15.32■□□□□ 0.04
CPNE1-214ENST00000435747 RAB3GAP2Q9H2M9 1393 aa15.32■□□□□ 0.04
CPNE1-214ENST00000435747 ARHGEF28Q8N1W1 1705 aaKnown RBP15.31■□□□□ 0.04
CPNE1-214ENST00000435747 KLRG1Q96E93 195 aa15.31■□□□□ 0.04
CPNE1-214ENST00000435747 CDK19Q9BWU1 502 aa15.31■□□□□ 0.04
CPNE1-214ENST00000435747 RGPD5Q99666 1765 aa15.31■□□□□ 0.04
CPNE1-214ENST00000435747 TOMM70O94826 608 aa15.3■□□□□ 0.04
CPNE1-214ENST00000435747 SLC27A3Q5K4L6 730 aa15.3■□□□□ 0.04
CPNE1-214ENST00000435747 JMYQ8N9B5 988 aa15.3■□□□□ 0.04
CPNE1-214ENST00000435747 AXIN2Q9Y2T1 843 aa15.3■□□□□ 0.04
CPNE1-214ENST00000435747 NLRP6P59044 892 aa15.29■□□□□ 0.04
CPNE1-214ENST00000435747 SLIT3O75094 1523 aa15.28■□□□□ 0.04
CPNE1-214ENST00000435747 ABCC6O95255 1503 aa15.28■□□□□ 0.04
CPNE1-214ENST00000435747 MSH5O43196 834 aa15.28■□□□□ 0.04
CPNE1-214ENST00000435747 CD2APQ9Y5K6 639 aa15.28■□□□□ 0.04
CPNE1-214ENST00000435747 CCDC7Q96M83 1385 aa15.27■□□□□ 0.04
CPNE1-214ENST00000435747 WWC3Q9ULE0 1092 aa15.27■□□□□ 0.04
CPNE1-214ENST00000435747 CPSF1Q10570 1443 aaKnown RBP15.26■□□□□ 0.03
CPNE1-214ENST00000435747 PPIP5K1Q6PFW1 1433 aa15.26■□□□□ 0.03
CPNE1-214ENST00000435747 TRPM1Q7Z4N2 1603 aa15.26■□□□□ 0.03
CPNE1-214ENST00000435747 HTRA3P83110 453 aa15.25■□□□□ 0.03
CPNE1-214ENST00000435747 PCDH10Q9P2E7 1040 aa15.25■□□□□ 0.03
CPNE1-214ENST00000435747 MSL1Q68DK7 614 aa15.24■□□□□ 0.03
CPNE1-214ENST00000435747 KCNQ4P56696 695 aa15.22■□□□□ 0.03
CPNE1-214ENST00000435747 PIK3C2AO00443 1686 aa15.22■□□□□ 0.03
CPNE1-214ENST00000435747 ARHGEF25Q86VW2 580 aa15.21■□□□□ 0.03
CPNE1-214ENST00000435747 COL23A1Q86Y22 540 aaPredicted RBP15.21■□□□□ 0.03
CPNE1-214ENST00000435747 IGSF1Q8N6C5 1336 aa15.2■□□□□ 0.02
CPNE1-214ENST00000435747 RBM46Q8TBY0 533 aaKnown RBP15.2■□□□□ 0.02
CPNE1-214ENST00000435747 C16orf71Q8IYS4 520 aaPredicted RBP15.19■□□□□ 0.02
CPNE1-214ENST00000435747 LY75O60449 1722 aa15.18■□□□□ 0.02
CPNE1-214ENST00000435747 SOX12O15370 315 aa15.18■□□□□ 0.02
CPNE1-214ENST00000435747 IL2RBP14784 551 aa15.18■□□□□ 0.02
CPNE1-214ENST00000435747 KCNH5Q8NCM2 988 aa15.18■□□□□ 0.02
CPNE1-214ENST00000435747 NMRK2Q9NPI5 230 aa15.18■□□□□ 0.02
CPNE1-214ENST00000435747 KDM2AQ9Y2K7 1162 aa15.18■□□□□ 0.02
CPNE1-214ENST00000435747 SRPK2P78362 688 aaKnown RBP15.17■□□□□ 0.02
CPNE1-214ENST00000435747 HSPA1AP0DMV8 641 aaKnown RBP15.16■□□□□ 0.02
CPNE1-214ENST00000435747 HSPA1BP0DMV9 641 aaKnown RBP15.16■□□□□ 0.02
CPNE1-214ENST00000435747 FSTL1Q12841 308 aa15.16■□□□□ 0.02
CPNE1-214ENST00000435747 CCNL1Q9UK58 526 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-214ENST00000435747 CICQ96RK0 1608 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-214ENST00000435747 SYTL4Q96C24 671 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms