RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
TOP2B-204ENST00000435706 NOL10Q9BSC4 688 aaKnown RBP26.61■■□□□ 1.85
TOP2B-204ENST00000435706 PDRG1Q9NUG6 133 aa26.61■■□□□ 1.85
TOP2B-204ENST00000435706 PLEKHH2Q8IVE3 1493 aa26.6■■□□□ 1.85
TOP2B-204ENST00000435706 MAP4K4O95819 1239 aaPredicted RBP26.6■■□□□ 1.85
TOP2B-204ENST00000435706 PIP4K2AP48426 406 aaPredicted RBP26.6■■□□□ 1.85
TOP2B-204ENST00000435706 MAPK8IP2Q13387 824 aaPredicted RBP26.6■■□□□ 1.85
TOP2B-204ENST00000435706 CCDC183Q5T5S1 534 aa26.59■■□□□ 1.85
TOP2B-204ENST00000435706 PPP6R1Q9UPN7 881 aa26.59■■□□□ 1.85
TOP2B-204ENST00000435706 CLCN1P35523 988 aa26.58■■□□□ 1.85
TOP2B-204ENST00000435706 TMCO3Q6UWJ1 677 aa26.58■■□□□ 1.85
TOP2B-204ENST00000435706 UPF3BQ9BZI7 483 aaKnown RBP26.58■■□□□ 1.85
TOP2B-204ENST00000435706 CFAP45Q9UL16 551 aa26.58■■□□□ 1.85
TOP2B-204ENST00000435706 MCM5P33992 734 aa26.58■■□□□ 1.85
TOP2B-204ENST00000435706 KIF2AO00139 706 aaPredicted RBP26.57■■□□□ 1.84
TOP2B-204ENST00000435706 HSP90AB3PQ58FF7 597 aa26.57■■□□□ 1.84
TOP2B-204ENST00000435706 GAS2L2Q8NHY3 880 aa26.57■■□□□ 1.84
TOP2B-204ENST00000435706 DACH1Q9UI36 760 aa26.57■■□□□ 1.84
TOP2B-204ENST00000435706 MYO6Q9UM54 1294 aa26.57■■□□□ 1.84
TOP2B-204ENST00000435706 PTPN14Q15678 1187 aa26.57■■□□□ 1.84
TOP2B-204ENST00000435706 MAGEC2Q9UBF1 373 aaPredicted RBP26.57■■□□□ 1.84
TOP2B-204ENST00000435706 EPS15P42566 896 aa26.57■■□□□ 1.84
TOP2B-204ENST00000435706 EHBP1L1Q8N3D4 1523 aa26.57■■□□□ 1.84
TOP2B-204ENST00000435706 JAKMIP1Q96N16 626 aaKnown RBP26.57■■□□□ 1.84
TOP2B-204ENST00000435706 RPAP2Q8IXW5 612 aaPredicted RBP26.56■■□□□ 1.84
TOP2B-204ENST00000435706 NKTRP30414 1462 aaKnown RBP26.56■■□□□ 1.84
TOP2B-204ENST00000435706 BLOC1S2Q6QNY1 142 aa26.56■■□□□ 1.84
TOP2B-204ENST00000435706 VPS37DQ86XT2 251 aa26.55■■□□□ 1.84
TOP2B-204ENST00000435706 ZNF428Q96B54 188 aa26.55■■□□□ 1.84
TOP2B-204ENST00000435706 USP8P40818 1118 aa26.55■■□□□ 1.84
TOP2B-204ENST00000435706 RARSP54136 660 aaKnown RBP26.55■■□□□ 1.84
TOP2B-204ENST00000435706 CGNQ9P2M7 1197 aaKnown RBP26.55■■□□□ 1.84
TOP2B-204ENST00000435706 SART3Q15020 963 aaKnown RBP26.55■■□□□ 1.84
TOP2B-204ENST00000435706 ZNHIT6Q9NWK9 470 aaKnown RBP26.55■■□□□ 1.84
TOP2B-204ENST00000435706 DEF6Q9H4E7 631 aa26.54■■□□□ 1.84
TOP2B-204ENST00000435706 DYNC1I1O14576 645 aa26.54■■□□□ 1.84
TOP2B-204ENST00000435706 RAD21O60216 631 aa26.54■■□□□ 1.84
TOP2B-204ENST00000435706 PDIA4P13667 645 aaKnown RBP26.54■■□□□ 1.84
TOP2B-204ENST00000435706 PRDM2Q13029 1718 aa26.54■■□□□ 1.84
TOP2B-204ENST00000435706 CAMK4Q16566 473 aa26.54■■□□□ 1.84
TOP2B-204ENST00000435706 CT47A1Q5JQC4 288 aaPredicted RBP26.54■■□□□ 1.84
TOP2B-204ENST00000435706 CCDC102AQ96A19 550 aa26.54■■□□□ 1.84
TOP2B-204ENST00000435706 ZHX1Q9UKY1 873 aaPredicted RBP26.54■■□□□ 1.84
TOP2B-204ENST00000435706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.54■■□□□ 1.843e-6■■□□□ 14.5
TOP2B-204ENST00000435706 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
TOP2B-204ENST00000435706 USP25Q9UHP3 1055 aa26.53■■□□□ 1.84
TOP2B-204ENST00000435706 LRPPRCP42704 1394 aaKnown RBP26.53■■□□□ 1.84
TOP2B-204ENST00000435706 GOLGA6L10A6NI86 522 aa26.52■■□□□ 1.84
TOP2B-204ENST00000435706 PPP4R3BQ5MIZ7 849 aa26.51■■□□□ 1.83
TOP2B-204ENST00000435706 KIF18AQ8NI77 898 aa26.51■■□□□ 1.83
TOP2B-204ENST00000435706 PRXQ9BXM0 1461 aa26.51■■□□□ 1.83
TOP2B-204ENST00000435706 SMTNL1A8MU46 457 aa26.5■■□□□ 1.83
TOP2B-204ENST00000435706 CWC27Q6UX04 472 aaKnown RBP26.5■■□□□ 1.83
TOP2B-204ENST00000435706 TBC1D32Q96NH3 1257 aa26.5■■□□□ 1.83
TOP2B-204ENST00000435706 CALCOCO1Q9P1Z2 691 aa26.5■■□□□ 1.83
TOP2B-204ENST00000435706 NAIPQ13075 1403 aa26.5■■□□□ 1.83
TOP2B-204ENST00000435706 HSP90AB2PQ58FF8 381 aa26.5■■□□□ 1.83
TOP2B-204ENST00000435706 XRCC6P12956 609 aaKnown RBP eCLIP26.49■■□□□ 1.83
TOP2B-204ENST00000435706 TXLNAP40222 546 aa26.49■■□□□ 1.83
TOP2B-204ENST00000435706 CCDC181Q5TID7 509 aa26.48■■□□□ 1.83
TOP2B-204ENST00000435706 TCEAL9Q9UHQ7 104 aa26.48■■□□□ 1.83
TOP2B-204ENST00000435706 FAM193AP78312 1265 aa26.48■■□□□ 1.83
TOP2B-204ENST00000435706 TNNT1P13805 278 aa26.47■■□□□ 1.83
TOP2B-204ENST00000435706 CASTP20810 708 aaKnown RBP26.47■■□□□ 1.83
TOP2B-204ENST00000435706 EFCAB5A4FU69 1503 aa26.47■■□□□ 1.83
TOP2B-204ENST00000435706 SFPQP23246 707 aaKnown RBP eCLIP26.47■■□□□ 1.83
TOP2B-204ENST00000435706 KLHL40Q2TBA0 621 aa26.47■■□□□ 1.83
TOP2B-204ENST00000435706 HDGFL1Q5TGJ6 251 aa26.47■■□□□ 1.83
TOP2B-204ENST00000435706 BAG4O95429 457 aaKnown RBP26.47■■□□□ 1.83
TOP2B-204ENST00000435706 TBC1D2BQ9UPU7 963 aa26.47■■□□□ 1.83
TOP2B-204ENST00000435706 NCOA1Q15788 1441 aa26.46■■□□□ 1.83
TOP2B-204ENST00000435706 C9orf84Q5VXU9 1444 aa26.46■■□□□ 1.83
TOP2B-204ENST00000435706 FERMT3Q86UX7 667 aa26.46■■□□□ 1.83
TOP2B-204ENST00000435706 TMPOP42166 694 aaKnown RBP26.46■■□□□ 1.83
TOP2B-204ENST00000435706 IL1RAPL2Q9NP60 686 aa26.46■■□□□ 1.83
TOP2B-204ENST00000435706 PLEKHH1Q9ULM0 1364 aa26.45■■□□□ 1.83
TOP2B-204ENST00000435706 DUSP27Q5VZP5 1158 aa26.45■■□□□ 1.82
TOP2B-204ENST00000435706 CCDC83Q8IWF9 413 aa26.45■■□□□ 1.82
TOP2B-204ENST00000435706 CLIP2Q9UDT6 1046 aa26.45■■□□□ 1.82
TOP2B-204ENST00000435706 FYB1O15117 783 aa26.44■■□□□ 1.82
TOP2B-204ENST00000435706 PSME1Q06323 249 aa26.44■■□□□ 1.82
TOP2B-204ENST00000435706 SULT6B1Q6IMI4 303 aa26.44■■□□□ 1.82
TOP2B-204ENST00000435706 PRIMPOLQ96LW4 560 aa26.44■■□□□ 1.82
TOP2B-204ENST00000435706 C16orf45Q96MC5 204 aaPredicted RBP26.44■■□□□ 1.82
TOP2B-204ENST00000435706 SSH1Q8WYL5 1049 aa26.44■■□□□ 1.82
TOP2B-204ENST00000435706 RAPGEF4Q8WZA2 1011 aa26.44■■□□□ 1.82
TOP2B-204ENST00000435706 PLCD4Q9BRC7 762 aa26.44■■□□□ 1.82
TOP2B-204ENST00000435706 DAPK1P53355 1430 aa26.43■■□□□ 1.82
TOP2B-204ENST00000435706 CFAP100Q494V2 611 aa26.43■■□□□ 1.82
TOP2B-204ENST00000435706 IQCEQ6IPM2 695 aa26.43■■□□□ 1.82
TOP2B-204ENST00000435706 GBP3Q9H0R5 595 aa26.43■■□□□ 1.82
TOP2B-204ENST00000435706 ERLIN2O94905 339 aa26.42■■□□□ 1.82
TOP2B-204ENST00000435706 ADCY5O95622 1261 aa26.42■■□□□ 1.82
TOP2B-204ENST00000435706 KRT32Q14532 448 aa26.42■■□□□ 1.82
TOP2B-204ENST00000435706 POLA1P09884 1462 aaPredicted RBP26.42■■□□□ 1.82
TOP2B-204ENST00000435706 SRGAP3O43295 1099 aa26.42■■□□□ 1.82
TOP2B-204ENST00000435706 ODF2Q5BJF6 829 aa26.42■■□□□ 1.82
TOP2B-204ENST00000435706 AACSQ86V21 672 aa26.41■■□□□ 1.82
TOP2B-204ENST00000435706 PANK2Q9BZ23 570 aa26.41■■□□□ 1.82
TOP2B-204ENST00000435706 SCAND2PQ9GZW5 306 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms