RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 DDB1Q16531 1140 aa26.2■■□□□ 1.78
SMG1P3-201ENST00000435197 NBPF1Q3BBV0 1214 aa26.18■■□□□ 1.78
SMG1P3-201ENST00000435197 CABP2Q9NPB3 220 aa26.18■■□□□ 1.78
SMG1P3-201ENST00000435197 RGPD5Q99666 1765 aa26.18■■□□□ 1.78
SMG1P3-201ENST00000435197 CENPJQ9HC77 1338 aaPredicted RBP26.17■■□□□ 1.78
SMG1P3-201ENST00000435197 NLRP6P59044 892 aa26.17■■□□□ 1.78
SMG1P3-201ENST00000435197 PTF1AQ7RTS3 328 aa26.17■■□□□ 1.78
SMG1P3-201ENST00000435197 BCL11BQ9C0K0 894 aaPredicted RBP26.17■■□□□ 1.78
SMG1P3-201ENST00000435197 TOM1L2Q6ZVM7 507 aa26.16■■□□□ 1.78
SMG1P3-201ENST00000435197 BCL9O00512 1426 aa26.15■■□□□ 1.78
SMG1P3-201ENST00000435197 PDGFDQ9GZP0 370 aaPredicted RBP26.14■■□□□ 1.78
SMG1P3-201ENST00000435197 WDR17Q8IZU2 1322 aa26.14■■□□□ 1.77
SMG1P3-201ENST00000435197 CPSF1Q10570 1443 aaKnown RBP26.13■■□□□ 1.77
SMG1P3-201ENST00000435197 PROM2Q8N271 834 aa26.12■■□□□ 1.77
SMG1P3-201ENST00000435197 MARCH10Q8NA82 808 aaPredicted RBP26.12■■□□□ 1.77
SMG1P3-201ENST00000435197 CABP1Q9NZU7 370 aa26.12■■□□□ 1.77
SMG1P3-201ENST00000435197 ZBTB7AO95365 584 aa26.1■■□□□ 1.77
SMG1P3-201ENST00000435197 CDCA7Q9BWT1 371 aaPredicted RBP26.1■■□□□ 1.77
SMG1P3-201ENST00000435197 AXIN2Q9Y2T1 843 aa26.1■■□□□ 1.77
SMG1P3-201ENST00000435197 PTGER2P43116 358 aa26.08■■□□□ 1.77
SMG1P3-201ENST00000435197 TRPM1Q7Z4N2 1603 aa26.07■■□□□ 1.76
SMG1P3-201ENST00000435197 NHSQ6T4R5 1651 aa26.06■■□□□ 1.76
SMG1P3-201ENST00000435197 TXNRD1Q16881 649 aa26.05■■□□□ 1.76
SMG1P3-201ENST00000435197 STK32BQ9NY57 414 aa26.05■■□□□ 1.76
SMG1P3-201ENST00000435197 CHD4Q14839 1912 aa26.04■■□□□ 1.76
SMG1P3-201ENST00000435197 ARHGEF25Q86VW2 580 aa26.04■■□□□ 1.76
SMG1P3-201ENST00000435197 ATF5Q9Y2D1 282 aaPredicted RBP26.04■■□□□ 1.76
SMG1P3-201ENST00000435197 CARD10Q9BWT7 1032 aa26.03■■□□□ 1.76
SMG1P3-201ENST00000435197 NFAT5O94916 1531 aa26.03■■□□□ 1.76
SMG1P3-201ENST00000435197 SLC15A2Q16348 729 aa26.02■■□□□ 1.76
SMG1P3-201ENST00000435197 ABCC6O95255 1503 aa26.01■■□□□ 1.75
SMG1P3-201ENST00000435197 CSB-PGBD3P0DP91 1061 aa26.01■■□□□ 1.75
SMG1P3-201ENST00000435197 TNS2Q63HR2 1409 aa26.01■■□□□ 1.75
SMG1P3-201ENST00000435197 ZNF784Q8NCA9 323 aaPredicted RBP26.01■■□□□ 1.75
SMG1P3-201ENST00000435197 KCNH5Q8NCM2 988 aa26.01■■□□□ 1.75
SMG1P3-201ENST00000435197 TTC21BQ7Z4L5 1316 aa26■■□□□ 1.75
SMG1P3-201ENST00000435197 FHDC1Q9C0D6 1143 aaPredicted RBP26■■□□□ 1.75
SMG1P3-201ENST00000435197 PAPPAQ13219 1627 aa25.99■■□□□ 1.75
SMG1P3-201ENST00000435197 CCDC7Q96M83 1385 aa25.99■■□□□ 1.75
SMG1P3-201ENST00000435197 EVC2Q86UK5 1308 aa25.99■■□□□ 1.75
SMG1P3-201ENST00000435197 EXOC5O00471 708 aa25.98■■□□□ 1.75
SMG1P3-201ENST00000435197 SOX12O15370 315 aa25.98■■□□□ 1.75
SMG1P3-201ENST00000435197 SYT17Q9BSW7 474 aa25.98■■□□□ 1.75
SMG1P3-201ENST00000435197 MTFR1LQ9H019 292 aa25.98■■□□□ 1.75
SMG1P3-201ENST00000435197 SGIP1Q9BQI5 828 aa25.97■■□□□ 1.75
SMG1P3-201ENST00000435197 TTC21AQ8NDW8 1320 aa25.96■■□□□ 1.75
SMG1P3-201ENST00000435197 ZNF692Q9BU19 519 aaPredicted RBP25.96■■□□□ 1.75
SMG1P3-201ENST00000435197 MON2Q7Z3U7 1717 aa25.96■■□□□ 1.75
SMG1P3-201ENST00000435197 BTAF1O14981 1849 aa25.95■■□□□ 1.75
SMG1P3-201ENST00000435197 USP54Q70EL1 1684 aa25.93■■□□□ 1.74
SMG1P3-201ENST00000435197 LTN1O94822 1766 aa25.92■■□□□ 1.74
SMG1P3-201ENST00000435197 ACSBG1Q96GR2 724 aa25.89■■□□□ 1.74
SMG1P3-201ENST00000435197 KTN1Q86UP2 1357 aaKnown RBP25.89■■□□□ 1.74
SMG1P3-201ENST00000435197 MAP3K5Q99683 1374 aa25.89■■□□□ 1.74
SMG1P3-201ENST00000435197 ARXQ96QS3 562 aa25.88■■□□□ 1.73
SMG1P3-201ENST00000435197 QSER1Q2KHR3 1735 aa25.87■■□□□ 1.73
SMG1P3-201ENST00000435197 ERBB3P21860 1342 aa25.87■■□□□ 1.73
SMG1P3-201ENST00000435197 L3MBTL2Q969R5 705 aa25.86■■□□□ 1.73
SMG1P3-201ENST00000435197 KAT6BQ8WYB5 2073 aa25.86■■□□□ 1.73
SMG1P3-201ENST00000435197 USP31Q70CQ4 1352 aa25.84■■□□□ 1.73
SMG1P3-201ENST00000435197 COL24A1Q17RW2 1714 aa25.84■■□□□ 1.73
SMG1P3-201ENST00000435197 ZNF827Q17R98 1081 aa25.83■■□□□ 1.73
SMG1P3-201ENST00000435197 NLRP2Q9NX02 1062 aa25.83■■□□□ 1.73
SMG1P3-201ENST00000435197 SENP3-EIF4A1A0A087X0R7 540 aa25.82■■□□□ 1.72
SMG1P3-201ENST00000435197 IL2RBP14784 551 aa25.82■■□□□ 1.72
SMG1P3-201ENST00000435197 ROCK2O75116 1388 aaKnown RBP25.82■■□□□ 1.72
SMG1P3-201ENST00000435197 C1QTNF8P60827 252 aa25.81■■□□□ 1.72
SMG1P3-201ENST00000435197 TUBGCP6Q96RT7 1819 aa25.8■■□□□ 1.72
SMG1P3-201ENST00000435197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.79■■□□□ 1.72
SMG1P3-201ENST00000435197 LRRC4BQ9NT99 713 aa25.79■■□□□ 1.72
SMG1P3-201ENST00000435197 CD163L1Q9NR16 1453 aa25.79■■□□□ 1.72
SMG1P3-201ENST00000435197 NME9Q86XW9 330 aa25.77■■□□□ 1.72
SMG1P3-201ENST00000435197 FAM208AQ9UK61 1670 aaKnown RBP25.77■■□□□ 1.72
SMG1P3-201ENST00000435197 ANKRD24Q8TF21 1146 aa25.76■■□□□ 1.71
SMG1P3-201ENST00000435197 SBNO2Q9Y2G9 1366 aa25.76■■□□□ 1.71
SMG1P3-201ENST00000435197 GPR162Q16538 588 aa25.75■■□□□ 1.71
SMG1P3-201ENST00000435197 AKT1S1Q96B36 256 aa25.75■■□□□ 1.71
SMG1P3-201ENST00000435197 UTRNP46939 3433 aa25.74■■□□□ 1.71
SMG1P3-201ENST00000435197 SLC16A10Q8TF71 515 aa25.73■■□□□ 1.71
SMG1P3-201ENST00000435197 DOT1LQ8TEK3 1739 aa25.73■■□□□ 1.71
SMG1P3-201ENST00000435197 LY75O60449 1722 aa25.72■■□□□ 1.71
SMG1P3-201ENST00000435197 SLC27A3Q5K4L6 730 aa25.71■■□□□ 1.71
SMG1P3-201ENST00000435197 KLHL34Q8N239 644 aa25.71■■□□□ 1.71
SMG1P3-201ENST00000435197 PNPLA7Q6ZV29 1317 aa25.7■■□□□ 1.71
SMG1P3-201ENST00000435197 POLD1P28340 1107 aa25.7■■□□□ 1.7
SMG1P3-201ENST00000435197 SHANK3Q9BYB0 1731 aa25.69■■□□□ 1.7
SMG1P3-201ENST00000435197 SIN3AQ96ST3 1273 aa25.69■■□□□ 1.7
SMG1P3-201ENST00000435197 EDC4Q6P2E9 1401 aaKnown RBP25.69■■□□□ 1.7
SMG1P3-201ENST00000435197 CCER1Q8TC90 406 aaPredicted RBP25.68■■□□□ 1.7
SMG1P3-201ENST00000435197 GIGYF1O75420 1035 aaPredicted RBP25.66■■□□□ 1.7
SMG1P3-201ENST00000435197 HDGFL2Q7Z4V5 671 aaPredicted RBP25.66■■□□□ 1.7
SMG1P3-201ENST00000435197 PELP1Q8IZL8 1130 aaKnown RBP25.66■■□□□ 1.7
SMG1P3-201ENST00000435197 DDX54Q8TDD1 881 aaKnown RBP25.66■■□□□ 1.7
SMG1P3-201ENST00000435197 TMC1Q8TDI8 760 aa25.65■■□□□ 1.7
SMG1P3-201ENST00000435197 RGPD2P0DJD1 1756 aa25.64■■□□□ 1.7
SMG1P3-201ENST00000435197 TFCP2L1Q9NZI6 479 aa25.64■■□□□ 1.7
SMG1P3-201ENST00000435197 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
SMG1P3-201ENST00000435197 KCNQ4P56696 695 aa25.63■■□□□ 1.69
SMG1P3-201ENST00000435197 NLGN2Q8NFZ4 835 aa25.63■■□□□ 1.69
SMG1P3-201ENST00000435197 IP6K1Q92551 441 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms