RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 SOX12O15370 315 aa16.7■□□□□ 0.26
CHRNA1-207ENST00000435083 ANO8Q9HCE9 1232 aaPredicted RBP16.7■□□□□ 0.26
CHRNA1-207ENST00000435083 COL18A1P39060 1754 aa16.7■□□□□ 0.26
CHRNA1-207ENST00000435083 PIK3C2AO00443 1686 aa16.7■□□□□ 0.26
CHRNA1-207ENST00000435083 CSB-PGBD3P0DP91 1061 aa16.69■□□□□ 0.26
CHRNA1-207ENST00000435083 MARCH10Q8NA82 808 aaPredicted RBP16.69■□□□□ 0.26
CHRNA1-207ENST00000435083 RGPD3A6NKT7 1758 aaPredicted RBP16.69■□□□□ 0.26
CHRNA1-207ENST00000435083 RGPD4Q7Z3J3 1758 aa16.69■□□□□ 0.26
CHRNA1-207ENST00000435083 NINLQ9Y2I6 1382 aa16.69■□□□□ 0.26
CHRNA1-207ENST00000435083 CDCA7Q9BWT1 371 aaPredicted RBP16.68■□□□□ 0.26
CHRNA1-207ENST00000435083 CPSF1Q10570 1443 aaKnown RBP16.68■□□□□ 0.26
CHRNA1-207ENST00000435083 WNK3Q9BYP7 1800 aa16.68■□□□□ 0.26
CHRNA1-207ENST00000435083 TTC21BQ7Z4L5 1316 aa16.68■□□□□ 0.26
CHRNA1-207ENST00000435083 ARHGEF25Q86VW2 580 aa16.68■□□□□ 0.26
CHRNA1-207ENST00000435083 KCNH5Q8NCM2 988 aa16.68■□□□□ 0.26
CHRNA1-207ENST00000435083 ZNF692Q9BU19 519 aaPredicted RBP16.68■□□□□ 0.26
CHRNA1-207ENST00000435083 RGPD5Q99666 1765 aa16.67■□□□□ 0.26
CHRNA1-207ENST00000435083 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
CHRNA1-207ENST00000435083 AKAP12Q02952 1782 aa16.67■□□□□ 0.26
CHRNA1-207ENST00000435083 PROM2Q8N271 834 aa16.66■□□□□ 0.26
CHRNA1-207ENST00000435083 CARD10Q9BWT7 1032 aa16.66■□□□□ 0.26
CHRNA1-207ENST00000435083 PDGFDQ9GZP0 370 aaPredicted RBP16.65■□□□□ 0.26
CHRNA1-207ENST00000435083 TRPM1Q7Z4N2 1603 aa16.65■□□□□ 0.26
CHRNA1-207ENST00000435083 EXOC5O00471 708 aa16.64■□□□□ 0.25
CHRNA1-207ENST00000435083 ZBTB7AO95365 584 aa16.64■□□□□ 0.25
CHRNA1-207ENST00000435083 CASZ1Q86V15 1759 aa16.64■□□□□ 0.25
CHRNA1-207ENST00000435083 TXNRD1Q16881 649 aa16.64■□□□□ 0.25
CHRNA1-207ENST00000435083 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
CHRNA1-207ENST00000435083 TTC21AQ8NDW8 1320 aa16.63■□□□□ 0.25
CHRNA1-207ENST00000435083 BCL9O00512 1426 aa16.63■□□□□ 0.25
CHRNA1-207ENST00000435083 STK32BQ9NY57 414 aa16.63■□□□□ 0.25
CHRNA1-207ENST00000435083 ROCK2O75116 1388 aaKnown RBP16.61■□□□□ 0.25
CHRNA1-207ENST00000435083 KTN1Q86UP2 1357 aaKnown RBP16.61■□□□□ 0.25
CHRNA1-207ENST00000435083 SIN3AQ96ST3 1273 aa16.61■□□□□ 0.25
CHRNA1-207ENST00000435083 CCDC7Q96M83 1385 aa16.6■□□□□ 0.25
CHRNA1-207ENST00000435083 NEUROD1Q13562 356 aa16.6■□□□□ 0.25
CHRNA1-207ENST00000435083 SLC15A2Q16348 729 aa16.6■□□□□ 0.25
CHRNA1-207ENST00000435083 NFAT5O94916 1531 aa16.59■□□□□ 0.25
CHRNA1-207ENST00000435083 PTGER2P43116 358 aa16.59■□□□□ 0.25
CHRNA1-207ENST00000435083 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
CHRNA1-207ENST00000435083 MYOM1P52179 1685 aa16.58■□□□□ 0.25
CHRNA1-207ENST00000435083 ACSBG1Q96GR2 724 aa16.58■□□□□ 0.24
CHRNA1-207ENST00000435083 TNS2Q63HR2 1409 aa16.57■□□□□ 0.24
CHRNA1-207ENST00000435083 NLRP2Q9NX02 1062 aa16.57■□□□□ 0.24
CHRNA1-207ENST00000435083 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
CHRNA1-207ENST00000435083 MON2Q7Z3U7 1717 aa16.55■□□□□ 0.24
CHRNA1-207ENST00000435083 ABCC6O95255 1503 aa16.55■□□□□ 0.24
CHRNA1-207ENST00000435083 SYT17Q9BSW7 474 aa16.55■□□□□ 0.24
CHRNA1-207ENST00000435083 MTFR1LQ9H019 292 aa16.55■□□□□ 0.24
CHRNA1-207ENST00000435083 NHSQ6T4R5 1651 aa16.54■□□□□ 0.24
CHRNA1-207ENST00000435083 NME9Q86XW9 330 aa16.54■□□□□ 0.24
CHRNA1-207ENST00000435083 ERBB3P21860 1342 aa16.54■□□□□ 0.24
CHRNA1-207ENST00000435083 IL2RBP14784 551 aa16.53■□□□□ 0.24
CHRNA1-207ENST00000435083 TMC1Q8TDI8 760 aa16.53■□□□□ 0.24
CHRNA1-207ENST00000435083 USP31Q70CQ4 1352 aa16.53■□□□□ 0.24
CHRNA1-207ENST00000435083 ANKRD24Q8TF21 1146 aa16.51■□□□□ 0.23
CHRNA1-207ENST00000435083 LTN1O94822 1766 aa16.51■□□□□ 0.23
CHRNA1-207ENST00000435083 HDGFL2Q7Z4V5 671 aaPredicted RBP16.51■□□□□ 0.23
CHRNA1-207ENST00000435083 SGIP1Q9BQI5 828 aa16.51■□□□□ 0.23
CHRNA1-207ENST00000435083 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
CHRNA1-207ENST00000435083 ZNF784Q8NCA9 323 aaPredicted RBP16.5■□□□□ 0.23
CHRNA1-207ENST00000435083 ARXQ96QS3 562 aa16.5■□□□□ 0.23
CHRNA1-207ENST00000435083 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
CHRNA1-207ENST00000435083 BTAF1O14981 1849 aa16.49■□□□□ 0.23
CHRNA1-207ENST00000435083 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
CHRNA1-207ENST00000435083 SLC12A5Q9H2X9 1139 aa16.49■□□□□ 0.23
CHRNA1-207ENST00000435083 USP54Q70EL1 1684 aa16.49■□□□□ 0.23
CHRNA1-207ENST00000435083 CD163L1Q9NR16 1453 aa16.49■□□□□ 0.23
CHRNA1-207ENST00000435083 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
CHRNA1-207ENST00000435083 PAPPAQ13219 1627 aa16.47■□□□□ 0.23
CHRNA1-207ENST00000435083 DDX54Q8TDD1 881 aaKnown RBP16.47■□□□□ 0.23
CHRNA1-207ENST00000435083 LRRC4BQ9NT99 713 aa16.47■□□□□ 0.23
CHRNA1-207ENST00000435083 LTV1Q96GA3 475 aaPredicted RBP16.46■□□□□ 0.23
CHRNA1-207ENST00000435083 TERF2IPQ9NYB0 399 aa16.46■□□□□ 0.23
CHRNA1-207ENST00000435083 EDC4Q6P2E9 1401 aaKnown RBP16.46■□□□□ 0.22
CHRNA1-207ENST00000435083 CHD4Q14839 1912 aa16.44■□□□□ 0.22
CHRNA1-207ENST00000435083 KLHL34Q8N239 644 aa16.44■□□□□ 0.22
CHRNA1-207ENST00000435083 IP6K1Q92551 441 aa16.43■□□□□ 0.22
CHRNA1-207ENST00000435083 A0A1W2PP64 1363 aa16.43■□□□□ 0.22
CHRNA1-207ENST00000435083 GPR162Q16538 588 aa16.43■□□□□ 0.22
CHRNA1-207ENST00000435083 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
CHRNA1-207ENST00000435083 SYTL4Q96C24 671 aaPredicted RBP16.43■□□□□ 0.22
CHRNA1-207ENST00000435083 SLC27A3Q5K4L6 730 aa16.42■□□□□ 0.22
CHRNA1-207ENST00000435083 MAP3K5Q99683 1374 aa16.42■□□□□ 0.22
CHRNA1-207ENST00000435083 SLC16A10Q8TF71 515 aa16.41■□□□□ 0.22
CHRNA1-207ENST00000435083 POLD1P28340 1107 aa16.4■□□□□ 0.22
CHRNA1-207ENST00000435083 PRIM1P49642 420 aaKnown RBP16.4■□□□□ 0.22
CHRNA1-207ENST00000435083 KCNQ4P56696 695 aa16.4■□□□□ 0.22
CHRNA1-207ENST00000435083 TFCP2L1Q9NZI6 479 aa16.4■□□□□ 0.22
CHRNA1-207ENST00000435083 PELP1Q8IZL8 1130 aaKnown RBP16.39■□□□□ 0.21
CHRNA1-207ENST00000435083 FAM208AQ9UK61 1670 aaKnown RBP16.39■□□□□ 0.21
CHRNA1-207ENST00000435083 PNPLA7Q6ZV29 1317 aa16.39■□□□□ 0.21
CHRNA1-207ENST00000435083 AMPHP49418 695 aa16.38■□□□□ 0.21
CHRNA1-207ENST00000435083 COG3Q96JB2 828 aa16.38■□□□□ 0.21
CHRNA1-207ENST00000435083 PUS7Q96PZ0 661 aaKnown RBP16.38■□□□□ 0.21
CHRNA1-207ENST00000435083 SENP3-EIF4A1A0A087X0R7 540 aa16.38■□□□□ 0.21
CHRNA1-207ENST00000435083 QSER1Q2KHR3 1735 aa16.38■□□□□ 0.21
CHRNA1-207ENST00000435083 MAP3K19Q56UN5 1328 aa16.37■□□□□ 0.21
CHRNA1-207ENST00000435083 FBLN1P23142 703 aa16.37■□□□□ 0.21
CHRNA1-207ENST00000435083 HOXC9P31274 260 aa16.37■□□□□ 0.21
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