RNA–Protein interactions for RNA: ENST00000435067.2

LINC01055-201, Transcript of long intergenic non-protein coding RNA 1055, humanhuman

TSL 3 BASIC

Gene LINC01055, Length 1,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01055-201ENST00000435067 IL13P35225 146 aa13.84□□□□□ -0.19
LINC01055-201ENST00000435067 U2AF1Q01081 240 aaKnown RBP eCLIP13.84□□□□□ -0.19
LINC01055-201ENST00000435067 EIF4A2Q14240 407 aaKnown RBP13.84□□□□□ -0.19
LINC01055-201ENST00000435067 KIF24Q5T7B8 1368 aa13.84□□□□□ -0.19
LINC01055-201ENST00000435067 IP6K1Q92551 441 aa13.84□□□□□ -0.19
LINC01055-201ENST00000435067 ABCA3Q99758 1704 aa13.83□□□□□ -0.2
LINC01055-201ENST00000435067 RTL1A6NKG5 1358 aa13.83□□□□□ -0.2
LINC01055-201ENST00000435067 KIAA0232Q92628 1395 aa13.83□□□□□ -0.2
LINC01055-201ENST00000435067 HNRNPUQ00839 825 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC01055-201ENST00000435067 CHRNA2Q15822 529 aa13.83□□□□□ -0.2
LINC01055-201ENST00000435067 LTV1Q96GA3 475 aaPredicted RBP13.83□□□□□ -0.2
LINC01055-201ENST00000435067 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
LINC01055-201ENST00000435067 AXIN2Q9Y2T1 843 aa13.82□□□□□ -0.2
LINC01055-201ENST00000435067 COL22A1Q8NFW1 1626 aaPredicted RBP13.81□□□□□ -0.2
LINC01055-201ENST00000435067 PRDM11Q9NQV5 511 aa13.81□□□□□ -0.2
LINC01055-201ENST00000435067 CPDO75976 1380 aa13.8□□□□□ -0.2
LINC01055-201ENST00000435067 HMOX1P09601 288 aa13.8□□□□□ -0.2
LINC01055-201ENST00000435067 HSPA1LP34931 641 aa13.8□□□□□ -0.2
LINC01055-201ENST00000435067 RGPD5Q99666 1765 aa13.79□□□□□ -0.2
LINC01055-201ENST00000435067 BLMP54132 1417 aaPredicted RBP13.79□□□□□ -0.2
LINC01055-201ENST00000435067 NUTM2BA6NNL0 878 aaPredicted RBP13.78□□□□□ -0.2
LINC01055-201ENST00000435067 NUTM2EB1AL46 878 aaPredicted RBP13.78□□□□□ -0.2
LINC01055-201ENST00000435067 NUTM2AQ8IVF1 878 aaPredicted RBP13.78□□□□□ -0.2
LINC01055-201ENST00000435067 COL18A1P39060 1754 aa13.78□□□□□ -0.2
LINC01055-201ENST00000435067 ANKRD24Q8TF21 1146 aa13.78□□□□□ -0.2
LINC01055-201ENST00000435067 EYA1Q99502 592 aa13.78□□□□□ -0.2
LINC01055-201ENST00000435067 FAM83GA6ND36 823 aa13.77□□□□□ -0.21
LINC01055-201ENST00000435067 FCHSD2O94868 740 aa13.77□□□□□ -0.21
LINC01055-201ENST00000435067 SULT6B1Q6IMI4 303 aa13.77□□□□□ -0.21
LINC01055-201ENST00000435067 AEBP1Q8IUX7 1158 aa13.77□□□□□ -0.21
LINC01055-201ENST00000435067 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
LINC01055-201ENST00000435067 JCADQ9P266 1359 aa13.77□□□□□ -0.21
LINC01055-201ENST00000435067 ADAMTS2O95450 1211 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 PRKAR2BP31323 418 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 RUNDC1Q96C34 613 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 RSPH6AQ9H0K4 717 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 ERBB3P21860 1342 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 IGSF1Q8N6C5 1336 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 APAF1O14727 1248 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 NBPF6Q5VWK0 638 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 USHBP1Q8N6Y0 703 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 NBPF4Q96M43 638 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 PLEKHF1Q96S99 279 aa13.76□□□□□ -0.21
LINC01055-201ENST00000435067 RGPD2P0DJD1 1756 aa13.75□□□□□ -0.21
LINC01055-201ENST00000435067 CAMTA1Q9Y6Y1 1673 aa13.74□□□□□ -0.21
LINC01055-201ENST00000435067 ABCC6O95255 1503 aa13.74□□□□□ -0.21
LINC01055-201ENST00000435067 CSB-PGBD3P0DP91 1061 aa13.74□□□□□ -0.21
LINC01055-201ENST00000435067 PNNQ9H307 717 aaKnown RBP13.74□□□□□ -0.21
LINC01055-201ENST00000435067 LMO7Q8WWI1 1683 aa13.74□□□□□ -0.21
LINC01055-201ENST00000435067 MAPK8IP3Q9UPT6 1336 aa13.73□□□□□ -0.21
LINC01055-201ENST00000435067 TCP11L2Q8N4U5 519 aa13.73□□□□□ -0.21
LINC01055-201ENST00000435067 NEUROD2Q15784 382 aa13.73□□□□□ -0.21
LINC01055-201ENST00000435067 PHACTR3Q96KR7 559 aa13.73□□□□□ -0.21
LINC01055-201ENST00000435067 STRN4Q9NRL3 753 aa13.73□□□□□ -0.21
LINC01055-201ENST00000435067 NLRP2Q9NX02 1062 aa13.73□□□□□ -0.21
LINC01055-201ENST00000435067 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
LINC01055-201ENST00000435067 RRP7AQ9Y3A4 280 aaKnown RBP13.73□□□□□ -0.21
LINC01055-201ENST00000435067 NEFMP07197 916 aa13.72□□□□□ -0.21
LINC01055-201ENST00000435067 KDRP35968 1356 aa13.71□□□□□ -0.21
LINC01055-201ENST00000435067 COL14A1Q05707 1796 aaKnown RBP13.71□□□□□ -0.21
LINC01055-201ENST00000435067 ZBED9Q6R2W3 1325 aa13.71□□□□□ -0.21
LINC01055-201ENST00000435067 COL5A2P05997 1499 aaPredicted RBP13.71□□□□□ -0.21
LINC01055-201ENST00000435067 EVA1CP58658 441 aa13.71□□□□□ -0.21
LINC01055-201ENST00000435067 SPATA31A6Q5VVP1 1343 aa13.71□□□□□ -0.22
LINC01055-201ENST00000435067 WDR17Q8IZU2 1322 aa13.7□□□□□ -0.22
LINC01055-201ENST00000435067 TOM1L2Q6ZVM7 507 aa13.7□□□□□ -0.22
LINC01055-201ENST00000435067 TMPOP42166 694 aaKnown RBP13.69□□□□□ -0.22
LINC01055-201ENST00000435067 LARP1Q6PKG0 1096 aaKnown RBP13.69□□□□□ -0.22
LINC01055-201ENST00000435067 C8orf37Q96NL8 207 aa13.68□□□□□ -0.22
LINC01055-201ENST00000435067 LRP6O75581 1613 aa13.68□□□□□ -0.22
LINC01055-201ENST00000435067 PLCH1Q4KWH8 1693 aa13.68□□□□□ -0.22
LINC01055-201ENST00000435067 FAM208AQ9UK61 1670 aaKnown RBP13.68□□□□□ -0.22
LINC01055-201ENST00000435067 RIPK4P57078 832 aa13.67□□□□□ -0.22
LINC01055-201ENST00000435067 NCAPD2Q15021 1401 aa13.67□□□□□ -0.22
LINC01055-201ENST00000435067 NFE2L2Q16236 605 aa13.67□□□□□ -0.22
LINC01055-201ENST00000435067 NGLY1Q96IV0 654 aa13.67□□□□□ -0.22
LINC01055-201ENST00000435067 CENPBP07199 599 aaPredicted RBP13.66□□□□□ -0.22
LINC01055-201ENST00000435067 USP35Q9P2H5 1018 aa13.66□□□□□ -0.22
LINC01055-201ENST00000435067 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
LINC01055-201ENST00000435067 MEX3CQ5U5Q3 659 aaKnown RBP13.65□□□□□ -0.22
LINC01055-201ENST00000435067 WWC1Q8IX03 1113 aa13.65□□□□□ -0.22
LINC01055-201ENST00000435067 NGEFQ8N5V2 710 aa13.65□□□□□ -0.22
LINC01055-201ENST00000435067 FBXO41Q8TF61 875 aa13.65□□□□□ -0.22
LINC01055-201ENST00000435067 RAPGEF4Q8WZA2 1011 aa13.64□□□□□ -0.23
LINC01055-201ENST00000435067 CARD10Q9BWT7 1032 aa13.64□□□□□ -0.23
LINC01055-201ENST00000435067 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
LINC01055-201ENST00000435067 CRB1P82279 1406 aa13.64□□□□□ -0.23
LINC01055-201ENST00000435067 SLIT2O94813 1529 aa13.64□□□□□ -0.23
LINC01055-201ENST00000435067 ZNF521Q96K83 1311 aa13.63□□□□□ -0.23
LINC01055-201ENST00000435067 CCDC27Q2M243 656 aa13.63□□□□□ -0.23
LINC01055-201ENST00000435067 CDCA7LQ96GN5 454 aa13.63□□□□□ -0.23
LINC01055-201ENST00000435067 DLG5Q8TDM6 1919 aa13.63□□□□□ -0.23
LINC01055-201ENST00000435067 NRAPQ86VF7 1730 aa13.63□□□□□ -0.23
LINC01055-201ENST00000435067 TATP17735 454 aaPredicted RBP13.62□□□□□ -0.23
LINC01055-201ENST00000435067 GAS2L2Q8NHY3 880 aa13.62□□□□□ -0.23
LINC01055-201ENST00000435067 MEGF6O75095 1541 aa13.62□□□□□ -0.23
LINC01055-201ENST00000435067 NWD2Q9ULI1 1742 aa13.62□□□□□ -0.23
LINC01055-201ENST00000435067 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
LINC01055-201ENST00000435067 PLEKHO1Q53GL0 409 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms