RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 PCDHGC3Q9UN70 934 aa15.87■□□□□ 0.13
LINC01090-202ENST00000434418 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
LINC01090-202ENST00000434418 FDX1P10109 184 aa15.86■□□□□ 0.13
LINC01090-202ENST00000434418 PREX1Q8TCU6 1659 aa15.86■□□□□ 0.13
LINC01090-202ENST00000434418 TIAM1Q13009 1591 aa15.85■□□□□ 0.13
LINC01090-202ENST00000434418 TLL1O43897 1013 aa15.85■□□□□ 0.13
LINC01090-202ENST00000434418 HNRNPMP52272 730 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC01090-202ENST00000434418 RIC3Q7Z5B4 369 aa15.85■□□□□ 0.13
LINC01090-202ENST00000434418 SCUBE3Q8IX30 993 aa15.85■□□□□ 0.13
LINC01090-202ENST00000434418 RSPH6AQ9H0K4 717 aa15.85■□□□□ 0.13
LINC01090-202ENST00000434418 AGLP35573 1532 aa15.84■□□□□ 0.13
LINC01090-202ENST00000434418 EHBP1L1Q8N3D4 1523 aa15.84■□□□□ 0.13
LINC01090-202ENST00000434418 SPTLC1O15269 473 aa15.84■□□□□ 0.13
LINC01090-202ENST00000434418 CLK2P49760 499 aaKnown RBP15.84■□□□□ 0.13
LINC01090-202ENST00000434418 CFDP1Q9UEE9 299 aaPredicted RBP15.84■□□□□ 0.13
LINC01090-202ENST00000434418 C3P01024 1663 aa15.83■□□□□ 0.13
LINC01090-202ENST00000434418 NR1I2O75469 434 aa15.83■□□□□ 0.12
LINC01090-202ENST00000434418 CSPP1Q1MSJ5 1256 aa15.83■□□□□ 0.12
LINC01090-202ENST00000434418 RNF19BQ6ZMZ0 732 aa15.83■□□□□ 0.12
LINC01090-202ENST00000434418 IL21Q9HBE4 155 aa15.83■□□□□ 0.12
LINC01090-202ENST00000434418 PCDHB15Q9Y5E8 787 aa15.83■□□□□ 0.12
LINC01090-202ENST00000434418 ATP7AQ04656 1500 aa15.83■□□□□ 0.12
LINC01090-202ENST00000434418 PROCA1Q8NCQ7 364 aaPredicted RBP15.82■□□□□ 0.12
LINC01090-202ENST00000434418 SPAG9O60271 1321 aaKnown RBP15.82■□□□□ 0.12
LINC01090-202ENST00000434418 INO80Q9ULG1 1556 aaPredicted RBP15.82■□□□□ 0.12
LINC01090-202ENST00000434418 SUPT6HQ7KZ85 1726 aaKnown RBP15.82■□□□□ 0.12
LINC01090-202ENST00000434418 ZPR1O75312 459 aa15.81■□□□□ 0.12
LINC01090-202ENST00000434418 ITGBL1O95965 494 aaPredicted RBP15.81■□□□□ 0.12
LINC01090-202ENST00000434418 SKIV2LQ15477 1246 aaKnown RBP15.81■□□□□ 0.12
LINC01090-202ENST00000434418 PLEKHH2Q8IVE3 1493 aa15.81■□□□□ 0.12
LINC01090-202ENST00000434418 SYMPKQ92797 1274 aaKnown RBP15.81■□□□□ 0.12
LINC01090-202ENST00000434418 ZNF644Q9H582 1327 aaPredicted RBP15.8■□□□□ 0.12
LINC01090-202ENST00000434418 KIAA1107Q9UPP5 1409 aa15.79■□□□□ 0.12
LINC01090-202ENST00000434418 LOC105371045A0A1W2PR82 267 aa15.79■□□□□ 0.12
LINC01090-202ENST00000434418 NKX2-3Q8TAU0 364 aa15.79■□□□□ 0.12
LINC01090-202ENST00000434418 THAP11Q96EK4 314 aa15.78■□□□□ 0.12
LINC01090-202ENST00000434418 ESF1Q9H501 851 aaKnown RBP15.78■□□□□ 0.12
LINC01090-202ENST00000434418 UHRF1BP1Q6BDS2 1440 aa15.77■□□□□ 0.12
LINC01090-202ENST00000434418 KCNC4Q03721 635 aa15.77■□□□□ 0.12
LINC01090-202ENST00000434418 QPCTQ16769 361 aa15.77■□□□□ 0.12
LINC01090-202ENST00000434418 PLXNC1O60486 1568 aa15.76■□□□□ 0.11
LINC01090-202ENST00000434418 GJA5P36382 358 aa15.76■□□□□ 0.11
LINC01090-202ENST00000434418 FBXO31Q5XUX0 539 aaPredicted RBP15.76■□□□□ 0.11
LINC01090-202ENST00000434418 CABLES1Q8TDN4 633 aa15.76■□□□□ 0.11
LINC01090-202ENST00000434418 A2MP01023 1474 aa15.76■□□□□ 0.11
LINC01090-202ENST00000434418 BRICD5Q6PL45 260 aa15.75■□□□□ 0.11
LINC01090-202ENST00000434418 FBXO41Q8TF61 875 aa15.75■□□□□ 0.11
LINC01090-202ENST00000434418 GOPCQ9HD26 462 aa15.75■□□□□ 0.11
LINC01090-202ENST00000434418 NCOA2Q15596 1464 aa15.75■□□□□ 0.11
LINC01090-202ENST00000434418 MBD5Q9P267 1494 aa15.74■□□□□ 0.11
LINC01090-202ENST00000434418 C6orf229H3BNL8 230 aa15.74■□□□□ 0.11
LINC01090-202ENST00000434418 CNTLNQ9NXG0 1405 aa15.74■□□□□ 0.11
LINC01090-202ENST00000434418 STRCQ7RTU9 1775 aa15.74■□□□□ 0.11
LINC01090-202ENST00000434418 MROH2AA6NES4 1674 aa15.73■□□□□ 0.11
LINC01090-202ENST00000434418 CLTCQ00610 1675 aaKnown RBP15.73■□□□□ 0.11
LINC01090-202ENST00000434418 ADGBQ8N7X0 1667 aa15.73■□□□□ 0.11
LINC01090-202ENST00000434418 PCMTD1Q96MG8 357 aaPredicted RBP15.73■□□□□ 0.11
LINC01090-202ENST00000434418 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.73■□□□□ 0.11
LINC01090-202ENST00000434418 CAMSAP2Q08AD1 1489 aa15.72■□□□□ 0.11
LINC01090-202ENST00000434418 VPS8Q8N3P4 1428 aa15.72■□□□□ 0.11
LINC01090-202ENST00000434418 FMNL1O95466 1100 aaPredicted RBP15.72■□□□□ 0.11
LINC01090-202ENST00000434418 HRCP23327 699 aa15.72■□□□□ 0.11
LINC01090-202ENST00000434418 TMEM132AQ24JP5 1023 aa15.72■□□□□ 0.11
LINC01090-202ENST00000434418 Q3C1V9 767 aa15.72■□□□□ 0.11
LINC01090-202ENST00000434418 SPSB2Q99619 263 aa15.72■□□□□ 0.11
LINC01090-202ENST00000434418 SETD1BQ9UPS6 1966 aaKnown RBP15.71■□□□□ 0.11
LINC01090-202ENST00000434418 PLA2G2EQ9NZK7 142 aa15.71■□□□□ 0.11
LINC01090-202ENST00000434418 ADH1BP00325 375 aa15.7■□□□□ 0.1
LINC01090-202ENST00000434418 TUSC1Q2TAM9 212 aa15.7■□□□□ 0.1
LINC01090-202ENST00000434418 SALL2Q9Y467 1007 aaPredicted RBP15.7■□□□□ 0.1
LINC01090-202ENST00000434418 LILRB3O75022 631 aa15.69■□□□□ 0.1
LINC01090-202ENST00000434418 MTMR2Q13614 643 aa15.69■□□□□ 0.1
LINC01090-202ENST00000434418 GGT6Q6P531 493 aa15.69■□□□□ 0.1
LINC01090-202ENST00000434418 ZBTB3Q9H5J0 574 aa15.69■□□□□ 0.1
LINC01090-202ENST00000434418 PRDM9Q9NQV7 894 aa15.69■□□□□ 0.1
LINC01090-202ENST00000434418 CCDC141Q6ZP82 1450 aa15.68■□□□□ 0.1
LINC01090-202ENST00000434418 ZMYM3Q14202 1370 aa15.68■□□□□ 0.1
LINC01090-202ENST00000434418 RTL5Q5HYW3 569 aaPredicted RBP15.68■□□□□ 0.1
LINC01090-202ENST00000434418 FAM160A2Q8N612 972 aaPredicted RBP15.68■□□□□ 0.1
LINC01090-202ENST00000434418 LRRC9Q6ZRR7 1453 aa15.67■□□□□ 0.1
LINC01090-202ENST00000434418 USB1Q9BQ65 265 aaKnown RBP15.67■□□□□ 0.1
LINC01090-202ENST00000434418 NUTM2BA6NNL0 878 aaPredicted RBP15.66■□□□□ 0.1
LINC01090-202ENST00000434418 NUTM2EB1AL46 878 aaPredicted RBP15.66■□□□□ 0.1
LINC01090-202ENST00000434418 NUTM2DQ5VT03 806 aaPredicted RBP15.66■□□□□ 0.1
LINC01090-202ENST00000434418 PRPF38BQ5VTL8 546 aaKnown RBP15.66■□□□□ 0.1
LINC01090-202ENST00000434418 RETREG3Q86VR2 466 aa15.66■□□□□ 0.1
LINC01090-202ENST00000434418 NUTM2AQ8IVF1 878 aaPredicted RBP15.66■□□□□ 0.1
LINC01090-202ENST00000434418 RTEL1-TNFRSF6BF6WH68 1400 aa15.66■□□□□ 0.1
LINC01090-202ENST00000434418 NPATQ14207 1427 aa15.66■□□□□ 0.1
LINC01090-202ENST00000434418 MYO3AQ8NEV4 1616 aa15.65■□□□□ 0.1
LINC01090-202ENST00000434418 CFAP99D6REC4 459 aa15.64■□□□□ 0.09
LINC01090-202ENST00000434418 S1PR4O95977 384 aa15.63■□□□□ 0.09
LINC01090-202ENST00000434418 KANK4Q5T7N3 995 aaPredicted RBP15.63■□□□□ 0.09
LINC01090-202ENST00000434418 CAMSAP1Q5T5Y3 1602 aa15.63■□□□□ 0.09
LINC01090-202ENST00000434418 DHX29Q7Z478 1369 aaKnown RBP15.62■□□□□ 0.09
LINC01090-202ENST00000434418 ARHGEF5Q12774 1597 aa15.62■□□□□ 0.09
LINC01090-202ENST00000434418 PTPRKQ15262 1439 aa15.62■□□□□ 0.09
LINC01090-202ENST00000434418 NCOA1Q15788 1441 aa15.62■□□□□ 0.09
LINC01090-202ENST00000434418 PRR7Q8TB68 274 aa15.62■□□□□ 0.09
LINC01090-202ENST00000434418 ZNF142P52746 1687 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms