RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 TESK2Q96S53 571 aa28.5■■■□□ 2.15
HLA-B-250ENST00000434333 SLC12A5Q9H2X9 1139 aa28.5■■■□□ 2.15
HLA-B-250ENST00000434333 SOX12O15370 315 aa28.49■■■□□ 2.15
HLA-B-250ENST00000434333 PUS7Q96PZ0 661 aaKnown RBP28.49■■■□□ 2.15
HLA-B-250ENST00000434333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.48■■■□□ 2.15
HLA-B-250ENST00000434333 PEAK1Q9H792 1746 aa28.48■■■□□ 2.15
HLA-B-250ENST00000434333 EZH2Q15910 746 aaKnown RBP28.47■■■□□ 2.15
HLA-B-250ENST00000434333 TOM1L2Q6ZVM7 507 aa28.47■■■□□ 2.15
HLA-B-250ENST00000434333 TMC1Q8TDI8 760 aa28.47■■■□□ 2.15
HLA-B-250ENST00000434333 ABCC6O95255 1503 aa28.47■■■□□ 2.15
HLA-B-250ENST00000434333 A0A1W2PP64 1363 aa28.47■■■□□ 2.15
HLA-B-250ENST00000434333 NME9Q86XW9 330 aa28.46■■■□□ 2.15
HLA-B-250ENST00000434333 CAMKK2Q96RR4 588 aa28.46■■■□□ 2.15
HLA-B-250ENST00000434333 EDC4Q6P2E9 1401 aaKnown RBP28.45■■■□□ 2.15
HLA-B-250ENST00000434333 ST20-MTHFSA0A0A6YYL1 179 aa28.45■■■□□ 2.14
HLA-B-250ENST00000434333 PSDA5PKW4 1024 aaPredicted RBP28.44■■■□□ 2.14
HLA-B-250ENST00000434333 HDGFL2Q7Z4V5 671 aaPredicted RBP28.44■■■□□ 2.14
HLA-B-250ENST00000434333 RREB1Q92766 1687 aa28.43■■■□□ 2.14
HLA-B-250ENST00000434333 LRP5O75197 1615 aa28.43■■■□□ 2.14
HLA-B-250ENST00000434333 APBA3O96018 575 aa28.42■■■□□ 2.14
HLA-B-250ENST00000434333 OVOS2A0A0G2JMS6 1433 aa28.41■■■□□ 2.14
HLA-B-250ENST00000434333 OVOS2A0A0J9YW53 1432 aa28.41■■■□□ 2.14
HLA-B-250ENST00000434333 OVOS2Q6IE36 1432 aa28.41■■■□□ 2.14
HLA-B-250ENST00000434333 PARD3Q8TEW0 1356 aa28.4■■■□□ 2.14
HLA-B-250ENST00000434333 CARD10Q9BWT7 1032 aa28.4■■■□□ 2.14
HLA-B-250ENST00000434333 TERF2IPQ9NYB0 399 aa28.4■■■□□ 2.14
HLA-B-250ENST00000434333 LTN1O94822 1766 aa28.39■■■□□ 2.14
HLA-B-250ENST00000434333 DDB1Q16531 1140 aa28.39■■■□□ 2.14
HLA-B-250ENST00000434333 SBF2Q86WG5 1849 aa28.39■■■□□ 2.13
HLA-B-250ENST00000434333 NUP188Q5SRE5 1749 aa28.38■■■□□ 2.13
HLA-B-250ENST00000434333 NINLQ9Y2I6 1382 aa28.37■■■□□ 2.13
HLA-B-250ENST00000434333 CSB-PGBD3P0DP91 1061 aa28.36■■■□□ 2.13
HLA-B-250ENST00000434333 CDCA7Q9BWT1 371 aaPredicted RBP28.36■■■□□ 2.13
HLA-B-250ENST00000434333 C11orf95C9JLR9 678 aaPredicted RBP28.35■■■□□ 2.13
HLA-B-250ENST00000434333 R3HDM1Q15032 1099 aaKnown RBP28.35■■■□□ 2.13
HLA-B-250ENST00000434333 ERBB3P21860 1342 aa28.34■■■□□ 2.13
HLA-B-250ENST00000434333 USP47Q96K76 1375 aa28.34■■■□□ 2.13
HLA-B-250ENST00000434333 CCDC7Q96M83 1385 aa28.34■■■□□ 2.13
HLA-B-250ENST00000434333 SLC24A1O60721 1099 aa28.32■■■□□ 2.12
HLA-B-250ENST00000434333 MARCH10Q8NA82 808 aaPredicted RBP28.32■■■□□ 2.12
HLA-B-250ENST00000434333 BCL9O00512 1426 aa28.32■■■□□ 2.12
HLA-B-250ENST00000434333 RGPD3A6NKT7 1758 aaPredicted RBP28.29■■■□□ 2.12
HLA-B-250ENST00000434333 RGPD4Q7Z3J3 1758 aa28.29■■■□□ 2.12
HLA-B-250ENST00000434333 TNS2Q63HR2 1409 aa28.28■■■□□ 2.12
HLA-B-250ENST00000434333 ANKRD36BQ8N2N9 1353 aa28.28■■■□□ 2.12
HLA-B-250ENST00000434333 PTF1AQ7RTS3 328 aa28.28■■■□□ 2.12
HLA-B-250ENST00000434333 TMF1P82094 1093 aa28.25■■■□□ 2.11
HLA-B-250ENST00000434333 ANKRD24Q8TF21 1146 aa28.25■■■□□ 2.11
HLA-B-250ENST00000434333 BCL11BQ9C0K0 894 aaPredicted RBP28.24■■■□□ 2.11
HLA-B-250ENST00000434333 EXOC5O00471 708 aa28.23■■■□□ 2.11
HLA-B-250ENST00000434333 PLSCR1O15162 318 aa28.23■■■□□ 2.11
HLA-B-250ENST00000434333 NLRP2Q9NX02 1062 aa28.23■■■□□ 2.11
HLA-B-250ENST00000434333 CLSPNQ9HAW4 1339 aa28.22■■■□□ 2.11
HLA-B-250ENST00000434333 TIMELESSQ9UNS1 1208 aa28.22■■■□□ 2.11
HLA-B-250ENST00000434333 IP6K1Q92551 441 aa28.21■■■□□ 2.11
HLA-B-250ENST00000434333 COG3Q96JB2 828 aa28.2■■■□□ 2.1
HLA-B-250ENST00000434333 FAM208AQ9UK61 1670 aaKnown RBP28.19■■■□□ 2.1
HLA-B-250ENST00000434333 MAP3K19Q56UN5 1328 aa28.18■■■□□ 2.1
HLA-B-250ENST00000434333 IL2RBP14784 551 aa28.18■■■□□ 2.1
HLA-B-250ENST00000434333 FBLN1P23142 703 aa28.18■■■□□ 2.1
HLA-B-250ENST00000434333 NBPF14Q5TI25 921 aa28.18■■■□□ 2.1
HLA-B-250ENST00000434333 MYOM1P52179 1685 aa28.17■■■□□ 2.1
HLA-B-250ENST00000434333 PCGF6Q9BYE7 350 aa28.17■■■□□ 2.1
HLA-B-250ENST00000434333 NHSQ6T4R5 1651 aa28.16■■■□□ 2.1
HLA-B-250ENST00000434333 FYB1O15117 783 aa28.15■■■□□ 2.1
HLA-B-250ENST00000434333 PROM2Q8N271 834 aa28.15■■■□□ 2.1
HLA-B-250ENST00000434333 HOXC9P31274 260 aa28.14■■■□□ 2.1
HLA-B-250ENST00000434333 ANO8Q9HCE9 1232 aaPredicted RBP28.13■■■□□ 2.09
HLA-B-250ENST00000434333 KCNQ2O43526 872 aa28.12■■■□□ 2.09
HLA-B-250ENST00000434333 CDCA8Q53HL2 280 aa28.12■■■□□ 2.09
HLA-B-250ENST00000434333 GGNBP2Q9H3C7 697 aa28.12■■■□□ 2.09
HLA-B-250ENST00000434333 KIF20BQ96Q89 1820 aa28.11■■■□□ 2.09
HLA-B-250ENST00000434333 LTV1Q96GA3 475 aaPredicted RBP28.11■■■□□ 2.09
HLA-B-250ENST00000434333 RGPD2P0DJD1 1756 aa28.11■■■□□ 2.09
HLA-B-250ENST00000434333 RTL1A6NKG5 1358 aa28.1■■■□□ 2.09
HLA-B-250ENST00000434333 AMPHP49418 695 aa28.08■■■□□ 2.09
HLA-B-250ENST00000434333 RRS1Q15050 365 aaKnown RBP28.08■■■□□ 2.09
HLA-B-250ENST00000434333 TXNRD1Q16881 649 aa28.07■■■□□ 2.08
HLA-B-250ENST00000434333 ACSBG1Q96GR2 724 aa28.07■■■□□ 2.08
HLA-B-250ENST00000434333 CARD14Q9BXL6 1004 aa28.07■■■□□ 2.08
HLA-B-250ENST00000434333 CASZ1Q86V15 1759 aa28.06■■■□□ 2.08
HLA-B-250ENST00000434333 BTAF1O14981 1849 aa28.04■■■□□ 2.08
HLA-B-250ENST00000434333 SHANK3Q9BYB0 1731 aa28.04■■■□□ 2.08
HLA-B-250ENST00000434333 MEGF6O75095 1541 aa28.02■■■□□ 2.08
HLA-B-250ENST00000434333 NSD3Q9BZ95 1437 aa28.02■■■□□ 2.08
HLA-B-250ENST00000434333 PAPPAQ13219 1627 aa28■■■□□ 2.07
HLA-B-250ENST00000434333 NBPF6Q5VWK0 638 aa27.99■■■□□ 2.07
HLA-B-250ENST00000434333 NBPF4Q96M43 638 aa27.99■■■□□ 2.07
HLA-B-250ENST00000434333 PDGFDQ9GZP0 370 aaPredicted RBP27.99■■■□□ 2.07
HLA-B-250ENST00000434333 DDX54Q8TDD1 881 aaKnown RBP27.98■■■□□ 2.07
HLA-B-250ENST00000434333 SPON1Q9HCB6 807 aa27.98■■■□□ 2.07
HLA-B-250ENST00000434333 INSRP06213 1382 aa27.97■■■□□ 2.07
HLA-B-250ENST00000434333 KIF24Q5T7B8 1368 aa27.97■■■□□ 2.07
HLA-B-250ENST00000434333 HSP90AB2PQ58FF8 381 aa27.96■■■□□ 2.07
HLA-B-250ENST00000434333 FLT4P35916 1363 aa27.96■■■□□ 2.07
HLA-B-250ENST00000434333 DOT1LQ8TEK3 1739 aa27.95■■■□□ 2.07
HLA-B-250ENST00000434333 SLC15A2Q16348 729 aa27.95■■■□□ 2.06
HLA-B-250ENST00000434333 KAT6BQ8WYB5 2073 aa27.95■■■□□ 2.06
HLA-B-250ENST00000434333 SMG6Q86US8 1419 aaKnown RBP27.94■■■□□ 2.06
HLA-B-250ENST00000434333 USHBP1Q8N6Y0 703 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms