RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 SOX12O15370 315 aa28.28■■■□□ 2.12
APOE-203ENST00000434152 EN1Q05925 392 aaPredicted RBP28.28■■■□□ 2.12
APOE-203ENST00000434152 ARHGEF25Q86VW2 580 aa28.28■■■□□ 2.12
APOE-203ENST00000434152 PIK3C2AO00443 1686 aa28.28■■■□□ 2.12
APOE-203ENST00000434152 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.26■■■□□ 2.11
APOE-203ENST00000434152 A0A1W2PP64 1363 aa28.25■■■□□ 2.11
APOE-203ENST00000434152 TRIM37O94972 964 aa28.25■■■□□ 2.11
APOE-203ENST00000434152 CRB1P82279 1406 aa28.25■■■□□ 2.11
APOE-203ENST00000434152 EDC4Q6P2E9 1401 aaKnown RBP28.25■■■□□ 2.11
APOE-203ENST00000434152 ANKRD36BQ8N2N9 1353 aa28.24■■■□□ 2.11
APOE-203ENST00000434152 MYOM1P52179 1685 aa28.23■■■□□ 2.11
APOE-203ENST00000434152 USP54Q70EL1 1684 aa28.23■■■□□ 2.11
APOE-203ENST00000434152 TOM1L2Q6ZVM7 507 aa28.23■■■□□ 2.11
APOE-203ENST00000434152 NME9Q86XW9 330 aa28.21■■■□□ 2.11
APOE-203ENST00000434152 SRCAPQ6ZRS2 3230 aa28.2■■■□□ 2.1
APOE-203ENST00000434152 WDR17Q8IZU2 1322 aa28.19■■■□□ 2.1
APOE-203ENST00000434152 USP31Q70CQ4 1352 aa28.19■■■□□ 2.1
APOE-203ENST00000434152 APBA3O96018 575 aa28.18■■■□□ 2.1
APOE-203ENST00000434152 EZH2Q15910 746 aaKnown RBP28.18■■■□□ 2.1
APOE-203ENST00000434152 COL18A1P39060 1754 aa28.18■■■□□ 2.1
APOE-203ENST00000434152 DISP2A7MBM2 1401 aa28.18■■■□□ 2.1
APOE-203ENST00000434152 CAMKK2Q96RR4 588 aa28.17■■■□□ 2.1
APOE-203ENST00000434152 RGPD1P0DJD0 1748 aa28.15■■■□□ 2.1
APOE-203ENST00000434152 PSDA5PKW4 1024 aaPredicted RBP28.15■■■□□ 2.1
APOE-203ENST00000434152 CSB-PGBD3P0DP91 1061 aa28.15■■■□□ 2.1
APOE-203ENST00000434152 NFAT5O94916 1531 aa28.13■■■□□ 2.09
APOE-203ENST00000434152 DDB1Q16531 1140 aa28.13■■■□□ 2.09
APOE-203ENST00000434152 CARD10Q9BWT7 1032 aa28.13■■■□□ 2.09
APOE-203ENST00000434152 TNS1Q9HBL0 1735 aaKnown RBP28.09■■■□□ 2.09
APOE-203ENST00000434152 C11orf95C9JLR9 678 aaPredicted RBP28.09■■■□□ 2.09
APOE-203ENST00000434152 CDCA7Q9BWT1 371 aaPredicted RBP28.09■■■□□ 2.09
APOE-203ENST00000434152 PARP4Q9UKK3 1724 aaKnown RBP28.07■■■□□ 2.08
APOE-203ENST00000434152 R3HDM1Q15032 1099 aaKnown RBP28.07■■■□□ 2.08
APOE-203ENST00000434152 OVOS2A0A0J9YW53 1432 aa28.07■■■□□ 2.08
APOE-203ENST00000434152 OVOS2Q6IE36 1432 aa28.07■■■□□ 2.08
APOE-203ENST00000434152 MARCH10Q8NA82 808 aaPredicted RBP28.05■■■□□ 2.08
APOE-203ENST00000434152 PARD3Q8TEW0 1356 aa28.04■■■□□ 2.08
APOE-203ENST00000434152 KIF20BQ96Q89 1820 aa28.04■■■□□ 2.08
APOE-203ENST00000434152 RGPD5Q99666 1765 aa28.04■■■□□ 2.08
APOE-203ENST00000434152 ABCC6O95255 1503 aa28.03■■■□□ 2.08
APOE-203ENST00000434152 OVOS2A0A0G2JMS6 1433 aa28.03■■■□□ 2.08
APOE-203ENST00000434152 EXOC5O00471 708 aa28.02■■■□□ 2.08
APOE-203ENST00000434152 CARD14Q9BXL6 1004 aa28.02■■■□□ 2.08
APOE-203ENST00000434152 CCDC7Q96M83 1385 aa28.01■■■□□ 2.07
APOE-203ENST00000434152 ERBB3P21860 1342 aa28.01■■■□□ 2.07
APOE-203ENST00000434152 KIF7Q2M1P5 1343 aa28.01■■■□□ 2.07
APOE-203ENST00000434152 NLRP2Q9NX02 1062 aa28.01■■■□□ 2.07
APOE-203ENST00000434152 ZEB1P37275 1124 aaPredicted RBP28■■■□□ 2.07
APOE-203ENST00000434152 PTF1AQ7RTS3 328 aa28■■■□□ 2.07
APOE-203ENST00000434152 ANKRD24Q8TF21 1146 aa28■■■□□ 2.07
APOE-203ENST00000434152 POLR3GLQ9BT43 218 aa28■■■□□ 2.07
APOE-203ENST00000434152 FYB1O15117 783 aa27.99■■■□□ 2.07
APOE-203ENST00000434152 COG3Q96JB2 828 aa27.99■■■□□ 2.07
APOE-203ENST00000434152 NSD3Q9BZ95 1437 aa27.99■■■□□ 2.07
APOE-203ENST00000434152 LRRC37A3O60309 1634 aa27.99■■■□□ 2.07
APOE-203ENST00000434152 IP6K1Q92551 441 aa27.97■■■□□ 2.07
APOE-203ENST00000434152 BCL11BQ9C0K0 894 aaPredicted RBP27.97■■■□□ 2.07
APOE-203ENST00000434152 PEAK1Q9H792 1746 aa27.97■■■□□ 2.07
APOE-203ENST00000434152 FBLN1P23142 703 aa27.96■■■□□ 2.07
APOE-203ENST00000434152 LTN1O94822 1766 aa27.96■■■□□ 2.07
APOE-203ENST00000434152 CGNL1Q0VF96 1302 aa27.95■■■□□ 2.07
APOE-203ENST00000434152 PLSCR1O15162 318 aa27.95■■■□□ 2.06
APOE-203ENST00000434152 NBPF14Q5TI25 921 aa27.95■■■□□ 2.06
APOE-203ENST00000434152 PANK3Q9H999 370 aa27.94■■■□□ 2.06
APOE-203ENST00000434152 BCL9O00512 1426 aa27.93■■■□□ 2.06
APOE-203ENST00000434152 IL2RBP14784 551 aa27.92■■■□□ 2.06
APOE-203ENST00000434152 MAP3K19Q56UN5 1328 aa27.92■■■□□ 2.06
APOE-203ENST00000434152 LTV1Q96GA3 475 aaPredicted RBP27.91■■■□□ 2.06
APOE-203ENST00000434152 ANKRD26Q9UPS8 1709 aa27.91■■■□□ 2.06
APOE-203ENST00000434152 GGNBP2Q9H3C7 697 aa27.9■■■□□ 2.06
APOE-203ENST00000434152 WNK3Q9BYP7 1800 aa27.9■■■□□ 2.06
APOE-203ENST00000434152 WASHC2AQ641Q2 1341 aa27.9■■■□□ 2.06
APOE-203ENST00000434152 NSD2O96028 1365 aa27.88■■■□□ 2.05
APOE-203ENST00000434152 AMPHP49418 695 aa27.88■■■□□ 2.05
APOE-203ENST00000434152 PROM2Q8N271 834 aa27.88■■■□□ 2.05
APOE-203ENST00000434152 LRP5O75197 1615 aa27.88■■■□□ 2.05
APOE-203ENST00000434152 HOXC9P31274 260 aa27.87■■■□□ 2.05
APOE-203ENST00000434152 TNS2Q63HR2 1409 aa27.86■■■□□ 2.05
APOE-203ENST00000434152 KCNQ2O43526 872 aa27.86■■■□□ 2.05
APOE-203ENST00000434152 RREB1Q92766 1687 aa27.86■■■□□ 2.05
APOE-203ENST00000434152 SBF2Q86WG5 1849 aa27.85■■■□□ 2.05
APOE-203ENST00000434152 RRS1Q15050 365 aaKnown RBP27.84■■■□□ 2.05
APOE-203ENST00000434152 KIF24Q5T7B8 1368 aa27.84■■■□□ 2.05
APOE-203ENST00000434152 ACSBG1Q96GR2 724 aa27.83■■■□□ 2.05
APOE-203ENST00000434152 NUP188Q5SRE5 1749 aa27.83■■■□□ 2.05
APOE-203ENST00000434152 KNSTRNQ9Y448 316 aa27.82■■■□□ 2.04
APOE-203ENST00000434152 RTL1A6NKG5 1358 aa27.82■■■□□ 2.04
APOE-203ENST00000434152 FAM208AQ9UK61 1670 aaKnown RBP27.79■■■□□ 2.04
APOE-203ENST00000434152 PER1O15534 1290 aaPredicted RBP27.79■■■□□ 2.04
APOE-203ENST00000434152 TXNRD1Q16881 649 aa27.79■■■□□ 2.04
APOE-203ENST00000434152 ANO8Q9HCE9 1232 aaPredicted RBP27.79■■■□□ 2.04
APOE-203ENST00000434152 DDX54Q8TDD1 881 aaKnown RBP27.78■■■□□ 2.04
APOE-203ENST00000434152 MAP2P11137 1827 aaKnown RBP27.76■■■□□ 2.04
APOE-203ENST00000434152 AMER1Q5JTC6 1135 aaPredicted RBP27.75■■■□□ 2.03
APOE-203ENST00000434152 NPC1L1Q9UHC9 1359 aa27.74■■■□□ 2.03
APOE-203ENST00000434152 NBPF6Q5VWK0 638 aa27.74■■■□□ 2.03
APOE-203ENST00000434152 NBPF4Q96M43 638 aa27.74■■■□□ 2.03
APOE-203ENST00000434152 RGPD3A6NKT7 1758 aaPredicted RBP27.73■■■□□ 2.03
APOE-203ENST00000434152 RGPD4Q7Z3J3 1758 aa27.73■■■□□ 2.03
APOE-203ENST00000434152 HSP90AB2PQ58FF8 381 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms