RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 NECTIN2Q92692 538 aa10.17□□□□□ -0.78
COL17A1-204ENST00000433822 RBM27Q9P2N5 1060 aaKnown RBP10.17□□□□□ -0.78
COL17A1-204ENST00000433822 ZMYM4Q5VZL5 1548 aa10.17□□□□□ -0.78
COL17A1-204ENST00000433822 A2MP01023 1474 aa10.17□□□□□ -0.78
COL17A1-204ENST00000433822 PTPRTO14522 1441 aa10.16□□□□□ -0.78
COL17A1-204ENST00000433822 RICTORQ6R327 1708 aa10.16□□□□□ -0.78
COL17A1-204ENST00000433822 INSRP06213 1382 aa10.16□□□□□ -0.78
COL17A1-204ENST00000433822 TET3O43151 1660 aa10.16□□□□□ -0.78
COL17A1-204ENST00000433822 RNF40O75150 1001 aa10.16□□□□□ -0.78
COL17A1-204ENST00000433822 NUDT18Q6ZVK8 323 aa10.16□□□□□ -0.78
COL17A1-204ENST00000433822 ZNF516Q92618 1163 aa10.16□□□□□ -0.78
COL17A1-204ENST00000433822 TRPM2O94759 1503 aa10.16□□□□□ -0.78
COL17A1-204ENST00000433822 WASHC2CQ9Y4E1 1318 aa10.15□□□□□ -0.78
COL17A1-204ENST00000433822 LTBP4Q8N2S1 1624 aa10.15□□□□□ -0.79
COL17A1-204ENST00000433822 CFAP74Q9C0B2 1584 aa10.14□□□□□ -0.79
COL17A1-204ENST00000433822 KIAA1210Q9ULL0 1709 aa10.14□□□□□ -0.79
COL17A1-204ENST00000433822 APLP1P51693 650 aa10.14□□□□□ -0.79
COL17A1-204ENST00000433822 SPRYD3Q8NCJ5 442 aa10.14□□□□□ -0.79
COL17A1-204ENST00000433822 CARD11Q9BXL7 1154 aa10.14□□□□□ -0.79
COL17A1-204ENST00000433822 TRAPPC8Q9Y2L5 1435 aa10.14□□□□□ -0.79
COL17A1-204ENST00000433822 CEP152O94986 1710 aa10.13□□□□□ -0.79
COL17A1-204ENST00000433822 ATP7AQ04656 1500 aa10.13□□□□□ -0.79
COL17A1-204ENST00000433822 OSBPP22059 807 aa10.13□□□□□ -0.79
COL17A1-204ENST00000433822 GGCXP38435 758 aa10.13□□□□□ -0.79
COL17A1-204ENST00000433822 WDR70Q9NW82 654 aa10.13□□□□□ -0.79
COL17A1-204ENST00000433822 MED1Q15648 1581 aaPredicted RBP10.13□□□□□ -0.79
COL17A1-204ENST00000433822 SPHKAPQ2M3C7 1700 aa10.13□□□□□ -0.79
COL17A1-204ENST00000433822 BRD4O60885 1362 aaPredicted RBP10.13□□□□□ -0.79
COL17A1-204ENST00000433822 LMTK2Q8IWU2 1503 aa10.12□□□□□ -0.79
COL17A1-204ENST00000433822 FANCAO15360 1455 aa10.12□□□□□ -0.79
COL17A1-204ENST00000433822 HNRNPUQ00839 825 aaKnown RBP eCLIP10.12□□□□□ -0.79
COL17A1-204ENST00000433822 RALBP1Q15311 655 aa10.12□□□□□ -0.79
COL17A1-204ENST00000433822 SCAPERQ9BY12 1400 aa10.12□□□□□ -0.79
COL17A1-204ENST00000433822 SPAG9O60271 1321 aaKnown RBP10.11□□□□□ -0.79
COL17A1-204ENST00000433822 MYT1Q01538 1121 aa10.11□□□□□ -0.79
COL17A1-204ENST00000433822 SLF2Q8IX21 1173 aa10.11□□□□□ -0.79
COL17A1-204ENST00000433822 DCAF11Q8TEB1 546 aa10.11□□□□□ -0.79
COL17A1-204ENST00000433822 CDHR5Q9HBB8 845 aa10.11□□□□□ -0.79
COL17A1-204ENST00000433822 MRS2Q9HD23 443 aa10.11□□□□□ -0.79
COL17A1-204ENST00000433822 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
COL17A1-204ENST00000433822 NKX2-3Q8TAU0 364 aa10.1□□□□□ -0.79
COL17A1-204ENST00000433822 PDZRN3Q9UPQ7 1066 aa10.1□□□□□ -0.79
COL17A1-204ENST00000433822 IQGAP1P46940 1657 aa10.09□□□□□ -0.79
COL17A1-204ENST00000433822 YEATS2Q9ULM3 1422 aa10.09□□□□□ -0.79
COL17A1-204ENST00000433822 SLC4A3P48751 1232 aa10.09□□□□□ -0.79
COL17A1-204ENST00000433822 TTC13Q8NBP0 860 aa10.09□□□□□ -0.79
COL17A1-204ENST00000433822 TMUB1Q9BVT8 246 aa10.09□□□□□ -0.79
COL17A1-204ENST00000433822 LRPPRCP42704 1394 aaKnown RBP10.09□□□□□ -0.79
COL17A1-204ENST00000433822 KANK1Q14678 1352 aa10.09□□□□□ -0.79
COL17A1-204ENST00000433822 SMG6Q86US8 1419 aaKnown RBP10.08□□□□□ -0.8
COL17A1-204ENST00000433822 SWT1Q5T5J6 900 aaKnown RBP10.08□□□□□ -0.8
COL17A1-204ENST00000433822 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.08□□□□□ -0.8
COL17A1-204ENST00000433822 MYOM2P54296 1465 aa10.08□□□□□ -0.8
COL17A1-204ENST00000433822 ZNF518AQ6AHZ1 1483 aa10.08□□□□□ -0.8
COL17A1-204ENST00000433822 MROH1Q8NDA8 1641 aa10.07□□□□□ -0.8
COL17A1-204ENST00000433822 PARD3Q8TEW0 1356 aa10.07□□□□□ -0.8
COL17A1-204ENST00000433822 ST20-MTHFSA0A0A6YYL1 179 aa10.07□□□□□ -0.8
COL17A1-204ENST00000433822 COPS2P61201 443 aa10.07□□□□□ -0.8
COL17A1-204ENST00000433822 MYBBP1AQ9BQG0 1328 aaKnown RBP10.07□□□□□ -0.8
COL17A1-204ENST00000433822 NEO1Q92859 1461 aa10.06□□□□□ -0.8
COL17A1-204ENST00000433822 MLH3Q9UHC1 1453 aa10.06□□□□□ -0.8
COL17A1-204ENST00000433822 CLTCL1P53675 1640 aa10.06□□□□□ -0.8
COL17A1-204ENST00000433822 EFCAB6Q5THR3 1501 aa10.06□□□□□ -0.8
COL17A1-204ENST00000433822 KIDINS220Q9ULH0 1771 aa10.06□□□□□ -0.8
COL17A1-204ENST00000433822 RNF123Q5XPI4 1314 aa10.06□□□□□ -0.8
COL17A1-204ENST00000433822 IQSEC2Q5JU85 1478 aa10.05□□□□□ -0.8
COL17A1-204ENST00000433822 MLECQ14165 292 aa10.05□□□□□ -0.8
COL17A1-204ENST00000433822 CCDC184Q52MB2 194 aa10.05□□□□□ -0.8
COL17A1-204ENST00000433822 ZNF326Q5BKZ1 582 aaKnown RBP10.05□□□□□ -0.8
COL17A1-204ENST00000433822 ZNF787Q6DD87 383 aa10.05□□□□□ -0.8
COL17A1-204ENST00000433822 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
COL17A1-204ENST00000433822 TESK2Q96S53 571 aa10.05□□□□□ -0.8
COL17A1-204ENST00000433822 PRR14Q9BWN1 585 aa10.05□□□□□ -0.8
COL17A1-204ENST00000433822 NPDC1Q9NQX5 325 aaPredicted RBP10.05□□□□□ -0.8
COL17A1-204ENST00000433822 SETD1BQ9UPS6 1966 aaKnown RBP10.05□□□□□ -0.8
COL17A1-204ENST00000433822 SCAF11Q99590 1463 aaKnown RBP10.04□□□□□ -0.8
COL17A1-204ENST00000433822 ZPR1O75312 459 aa10.04□□□□□ -0.8
COL17A1-204ENST00000433822 PNISRQ8TF01 805 aaKnown RBP10.04□□□□□ -0.8
COL17A1-204ENST00000433822 NPC1L1Q9UHC9 1359 aa10.03□□□□□ -0.8
COL17A1-204ENST00000433822 SYNMO15061 1565 aa10.03□□□□□ -0.8
COL17A1-204ENST00000433822 CEBPAP49715 358 aaPredicted RBP10.03□□□□□ -0.8
COL17A1-204ENST00000433822 CDCA8Q53HL2 280 aa10.03□□□□□ -0.8
COL17A1-204ENST00000433822 NLRP13Q86W25 1043 aa10.03□□□□□ -0.8
COL17A1-204ENST00000433822 TSHZ2Q9NRE2 1034 aa10.03□□□□□ -0.8
COL17A1-204ENST00000433822 IFT172Q9UG01 1749 aa10.03□□□□□ -0.8
COL17A1-204ENST00000433822 NRXN1Q9ULB1 1477 aa10.03□□□□□ -0.8
COL17A1-204ENST00000433822 SBNO2Q9Y2G9 1366 aa10.02□□□□□ -0.8
COL17A1-204ENST00000433822 PER1O15534 1290 aaPredicted RBP10.02□□□□□ -0.81
COL17A1-204ENST00000433822 TMF1P82094 1093 aa10.02□□□□□ -0.81
COL17A1-204ENST00000433822 KDM2AQ9Y2K7 1162 aa10.02□□□□□ -0.81
COL17A1-204ENST00000433822 KIF1BO60333 1816 aa10.02□□□□□ -0.81
COL17A1-204ENST00000433822 EIF3AQ14152 1382 aaKnown RBP10.01□□□□□ -0.81
COL17A1-204ENST00000433822 SETBP1Q9Y6X0 1596 aa10.01□□□□□ -0.81
COL17A1-204ENST00000433822 POGZQ7Z3K3 1410 aa10.01□□□□□ -0.81
COL17A1-204ENST00000433822 MYO3AQ8NEV4 1616 aa10.01□□□□□ -0.81
COL17A1-204ENST00000433822 FAM9BQ8IZU0 186 aa10.01□□□□□ -0.81
COL17A1-204ENST00000433822 EYA1Q99502 592 aa10.01□□□□□ -0.81
COL17A1-204ENST00000433822 PPP4R2Q9NY27 417 aa10.01□□□□□ -0.81
COL17A1-204ENST00000433822 C3P01024 1663 aa10.01□□□□□ -0.81
COL17A1-204ENST00000433822 PDE3BQ13370 1112 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms