RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 CAMTA1Q9Y6Y1 1673 aa21.24■□□□□ 0.99
TREX1-201ENST00000433541 CSB-PGBD3P0DP91 1061 aa21.23■□□□□ 0.99
TREX1-201ENST00000433541 VPS72Q15906 364 aa21.23■□□□□ 0.99
TREX1-201ENST00000433541 GJD4Q96KN9 370 aaPredicted RBP21.23■□□□□ 0.99
TREX1-201ENST00000433541 COL18A1P39060 1754 aa21.23■□□□□ 0.99
TREX1-201ENST00000433541 TNNT2P45379 298 aaPredicted RBP21.22■□□□□ 0.99
TREX1-201ENST00000433541 AMPHP49418 695 aa21.22■□□□□ 0.99
TREX1-201ENST00000433541 USP35Q9P2H5 1018 aa21.22■□□□□ 0.99
TREX1-201ENST00000433541 MAP2P11137 1827 aaKnown RBP21.22■□□□□ 0.99
TREX1-201ENST00000433541 NSD2O96028 1365 aa21.21■□□□□ 0.99
TREX1-201ENST00000433541 FBLN1P23142 703 aa21.2■□□□□ 0.98
TREX1-201ENST00000433541 RRS1Q15050 365 aaKnown RBP21.2■□□□□ 0.98
TREX1-201ENST00000433541 COL5A2P05997 1499 aaPredicted RBP21.2■□□□□ 0.98
TREX1-201ENST00000433541 ABCC6O95255 1503 aa21.19■□□□□ 0.98
TREX1-201ENST00000433541 GLI3P10071 1580 aa21.19■□□□□ 0.98
TREX1-201ENST00000433541 PPM1GO15355 546 aaPredicted RBP21.19■□□□□ 0.98
TREX1-201ENST00000433541 MORC1Q86VD1 984 aa21.19■□□□□ 0.98
TREX1-201ENST00000433541 TOM1L2Q6ZVM7 507 aa21.18■□□□□ 0.98
TREX1-201ENST00000433541 AXIN2Q9Y2T1 843 aa21.18■□□□□ 0.98
TREX1-201ENST00000433541 MAP3K19Q56UN5 1328 aa21.18■□□□□ 0.98
TREX1-201ENST00000433541 LARP1Q6PKG0 1096 aaKnown RBP21.17■□□□□ 0.98
TREX1-201ENST00000433541 SPATA31A5Q5VU36 1347 aa21.16■□□□□ 0.98
TREX1-201ENST00000433541 SPATA31A7Q8IWB4 1347 aa21.16■□□□□ 0.98
TREX1-201ENST00000433541 CC2D1BQ5T0F9 858 aaKnown RBP21.16■□□□□ 0.98
TREX1-201ENST00000433541 LTV1Q96GA3 475 aaPredicted RBP21.16■□□□□ 0.98
TREX1-201ENST00000433541 RGS12O14924 1447 aa21.15■□□□□ 0.98
TREX1-201ENST00000433541 FAM98CQ17RN3 349 aaKnown RBP21.15■□□□□ 0.98
TREX1-201ENST00000433541 CDK12Q9NYV4 1490 aaPredicted RBP21.14■□□□□ 0.98
TREX1-201ENST00000433541 BLMP54132 1417 aaPredicted RBP21.14■□□□□ 0.98
TREX1-201ENST00000433541 CRB1P82279 1406 aa21.14■□□□□ 0.98
TREX1-201ENST00000433541 RTL1A6NKG5 1358 aa21.13■□□□□ 0.97
TREX1-201ENST00000433541 SPATA31A1Q5TZJ5 1347 aa21.13■□□□□ 0.97
TREX1-201ENST00000433541 WDR17Q8IZU2 1322 aa21.13■□□□□ 0.97
TREX1-201ENST00000433541 HOXC9P31274 260 aa21.13■□□□□ 0.97
TREX1-201ENST00000433541 ANKRD24Q8TF21 1146 aa21.13■□□□□ 0.97
TREX1-201ENST00000433541 IP6K1Q92551 441 aa21.13■□□□□ 0.97
TREX1-201ENST00000433541 SMG6Q86US8 1419 aaKnown RBP21.12■□□□□ 0.97
TREX1-201ENST00000433541 FAM208AQ9UK61 1670 aaKnown RBP21.12■□□□□ 0.97
TREX1-201ENST00000433541 AMER1Q5JTC6 1135 aaPredicted RBP21.12■□□□□ 0.97
TREX1-201ENST00000433541 NLRP2Q9NX02 1062 aa21.12■□□□□ 0.97
TREX1-201ENST00000433541 EMILIN1Q9Y6C2 1016 aa21.12■□□□□ 0.97
TREX1-201ENST00000433541 BRWD3Q6RI45 1802 aa21.12■□□□□ 0.97
TREX1-201ENST00000433541 PEAK1Q9H792 1746 aa21.11■□□□□ 0.97
TREX1-201ENST00000433541 FLT4P35916 1363 aa21.1■□□□□ 0.97
TREX1-201ENST00000433541 ERBB3P21860 1342 aa21.1■□□□□ 0.97
TREX1-201ENST00000433541 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
TREX1-201ENST00000433541 DDX10Q13206 875 aaKnown RBP21.1■□□□□ 0.97
TREX1-201ENST00000433541 TCP11L2Q8N4U5 519 aa21.1■□□□□ 0.97
TREX1-201ENST00000433541 RGPD2P0DJD1 1756 aa21.1■□□□□ 0.97
TREX1-201ENST00000433541 WNK3Q9BYP7 1800 aa21.09■□□□□ 0.97
TREX1-201ENST00000433541 SEPT12Q8IYM1 358 aa21.09■□□□□ 0.97
TREX1-201ENST00000433541 THRAP3Q9Y2W1 955 aaKnown RBP21.07■□□□□ 0.96
TREX1-201ENST00000433541 HSP90AB2PQ58FF8 381 aa21.06■□□□□ 0.96
TREX1-201ENST00000433541 KIF24Q5T7B8 1368 aa21.06■□□□□ 0.96
TREX1-201ENST00000433541 ZNF316A6NFI3 1004 aaPredicted RBP21.05■□□□□ 0.96
TREX1-201ENST00000433541 CARD10Q9BWT7 1032 aa21.05■□□□□ 0.96
TREX1-201ENST00000433541 POLKQ9UBT6 870 aa21.05■□□□□ 0.96
TREX1-201ENST00000433541 THSD7AQ9UPZ6 1657 aa21.05■□□□□ 0.96
TREX1-201ENST00000433541 INSRP06213 1382 aa21.04■□□□□ 0.96
TREX1-201ENST00000433541 NPC1L1Q9UHC9 1359 aa21.04■□□□□ 0.96
TREX1-201ENST00000433541 BARGINQ6ZT62 677 aa21.03■□□□□ 0.96
TREX1-201ENST00000433541 PARP4Q9UKK3 1724 aaKnown RBP21.01■□□□□ 0.95
TREX1-201ENST00000433541 ONECUT3O60422 494 aaPredicted RBP21.01■□□□□ 0.95
TREX1-201ENST00000433541 KRT27Q7Z3Y8 459 aa21.01■□□□□ 0.95
TREX1-201ENST00000433541 PDE3BQ13370 1112 aa21■□□□□ 0.95
TREX1-201ENST00000433541 USHBP1Q8N6Y0 703 aa20.99■□□□□ 0.95
TREX1-201ENST00000433541 CDCA7Q9BWT1 371 aaPredicted RBP20.99■□□□□ 0.95
TREX1-201ENST00000433541 LRRC37A3O60309 1634 aa20.99■□□□□ 0.95
TREX1-201ENST00000433541 SOCS7O14512 581 aa20.98■□□□□ 0.95
TREX1-201ENST00000433541 DDB1Q16531 1140 aa20.98■□□□□ 0.95
TREX1-201ENST00000433541 IL2RBP14784 551 aa20.97■□□□□ 0.95
TREX1-201ENST00000433541 MTHFSP49914 203 aa20.97■□□□□ 0.95
TREX1-201ENST00000433541 NBPF6Q5VWK0 638 aa20.96■□□□□ 0.95
TREX1-201ENST00000433541 NBPF4Q96M43 638 aa20.96■□□□□ 0.95
TREX1-201ENST00000433541 FAM182BQ5T319 152 aa20.95■□□□□ 0.94
TREX1-201ENST00000433541 RAPGEF4Q8WZA2 1011 aa20.95■□□□□ 0.94
TREX1-201ENST00000433541 KAT6BQ8WYB5 2073 aa20.95■□□□□ 0.94
TREX1-201ENST00000433541 EXOC5O00471 708 aa20.94■□□□□ 0.94
TREX1-201ENST00000433541 EIF4A2Q14240 407 aaKnown RBP20.94■□□□□ 0.94
TREX1-201ENST00000433541 CFAP53Q96M91 514 aa20.92■□□□□ 0.94
TREX1-201ENST00000433541 DISP2A7MBM2 1401 aa20.92■□□□□ 0.94
TREX1-201ENST00000433541 TATP17735 454 aaPredicted RBP20.91■□□□□ 0.94
TREX1-201ENST00000433541 TNS2Q63HR2 1409 aa20.9■□□□□ 0.94
TREX1-201ENST00000433541 EYA1Q99502 592 aa20.9■□□□□ 0.94
TREX1-201ENST00000433541 PPP2R1AP30153 589 aa20.89■□□□□ 0.93
TREX1-201ENST00000433541 EP400Q96L91 3159 aa20.89■□□□□ 0.93
TREX1-201ENST00000433541 MEGF6O75095 1541 aa20.88■□□□□ 0.93
TREX1-201ENST00000433541 DIAPH1O60610 1272 aaKnown RBP20.88■□□□□ 0.93
TREX1-201ENST00000433541 SF3B2Q13435 895 aaKnown RBP20.88■□□□□ 0.93
TREX1-201ENST00000433541 OVOS2A0A0G2JMS6 1433 aa20.87■□□□□ 0.93
TREX1-201ENST00000433541 PARD3Q8TEW0 1356 aa20.87■□□□□ 0.93
TREX1-201ENST00000433541 FAM196AQ6ZSG2 479 aa20.87■□□□□ 0.93
TREX1-201ENST00000433541 DDX54Q8TDD1 881 aaKnown RBP20.87■□□□□ 0.93
TREX1-201ENST00000433541 U2SURPO15042 1029 aaKnown RBP20.86■□□□□ 0.93
TREX1-201ENST00000433541 RALBP1Q15311 655 aa20.86■□□□□ 0.93
TREX1-201ENST00000433541 UPF1Q92900 1129 aaKnown RBP eCLIP20.86■□□□□ 0.93
TREX1-201ENST00000433541 RGPD1P0DJD0 1748 aa20.86■□□□□ 0.93
TREX1-201ENST00000433541 ZCRB1Q8TBF4 217 aaKnown RBP20.85■□□□□ 0.93
TREX1-201ENST00000433541 IGSF1Q8N6C5 1336 aa20.84■□□□□ 0.93
TREX1-201ENST00000433541 IL13P35225 146 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms