RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 URI1O94763 535 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-203ENST00000432907 MNAT1P51948 309 aa12.35□□□□□ -0.43
PKNOX1-203ENST00000432907 EHBP1L1Q8N3D4 1523 aa12.35□□□□□ -0.43
PKNOX1-203ENST00000432907 TXLNBQ8N3L3 684 aa12.35□□□□□ -0.43
PKNOX1-203ENST00000432907 KIF3BO15066 747 aa12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 FILIP1LQ4L180 1135 aa12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 DYDC1Q8WWB3 177 aa12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 GBP3Q9H0R5 595 aa12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 NOB1Q9ULX3 412 aaKnown RBP12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 FKBP5Q13451 457 aaPredicted RBP12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 TRIM34Q9BYJ4 488 aa12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 SFPQP23246 707 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■□ 21.8
PKNOX1-203ENST00000432907 HS1BP3Q53T59 392 aa12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 LARP1BQ659C4 914 aaKnown RBP12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 SPATA32Q96LK8 384 aa12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 PRM3Q9NNZ6 103 aa12.34□□□□□ -0.43
PKNOX1-203ENST00000432907 BRPF1P55201 1214 aaPredicted RBP12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 CNTROBQ8N137 903 aa12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 ZNF830Q96NB3 372 aaPredicted RBP12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 UPF3BQ9BZI7 483 aaKnown RBP12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 TRMT1Q9NXH9 659 aaKnown RBP12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 RBM27Q9P2N5 1060 aaKnown RBP12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 PAXBP1Q9Y5B6 917 aa12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 ZNF608Q9ULD9 1512 aaPredicted RBP12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 DDX11Q96FC9 970 aa12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 ZNF396Q96N95 335 aaPredicted RBP12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 CLIP2Q9UDT6 1046 aa12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 CAMK4Q16566 473 aa12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 CRACR2AQ9BSW2 395 aa12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 MARCH6O60337 910 aa12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 NBPF8Q3BBV2 869 aa12.33□□□□□ -0.44
PKNOX1-203ENST00000432907 CBFA2T2O43439 604 aa12.32□□□□□ -0.44
PKNOX1-203ENST00000432907 STK38Q15208 465 aa12.32□□□□□ -0.44
PKNOX1-203ENST00000432907 HSP90AB4PQ58FF6 505 aa12.32□□□□□ -0.44
PKNOX1-203ENST00000432907 ATF7IPQ6VMQ6 1270 aa12.32□□□□□ -0.44
PKNOX1-203ENST00000432907 PPFIBP1Q86W92 1011 aa12.32□□□□□ -0.44
PKNOX1-203ENST00000432907 C9orf78Q9NZ63 289 aaPredicted RBP12.32□□□□□ -0.44
PKNOX1-203ENST00000432907 ME1P48163 572 aa12.32□□□□□ -0.44
PKNOX1-203ENST00000432907 SLFN5Q08AF3 891 aa12.32□□□□□ -0.44
PKNOX1-203ENST00000432907 SAFBQ15424 915 aaKnown RBP eCLIP12.32□□□□□ -0.44
PKNOX1-203ENST00000432907 LRSAM1Q6UWE0 723 aa12.32□□□□□ -0.44
PKNOX1-203ENST00000432907 ZNF330Q9Y3S2 320 aaPredicted RBP12.32□□□□□ -0.44
PKNOX1-203ENST00000432907 MLECQ14165 292 aa12.31□□□□□ -0.44
PKNOX1-203ENST00000432907 UVSSAQ2YD98 709 aa12.31□□□□□ -0.44
PKNOX1-203ENST00000432907 TRDNQ13061 729 aa12.31□□□□□ -0.44
PKNOX1-203ENST00000432907 JAKMIP3Q5VZ66 844 aa12.31□□□□□ -0.44
PKNOX1-203ENST00000432907 TSR2Q969E8 191 aaKnown RBP12.31□□□□□ -0.44
PKNOX1-203ENST00000432907 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
PKNOX1-203ENST00000432907 LRRFIP1Q32MZ4 808 aaKnown RBP12.31□□□□□ -0.44
PKNOX1-203ENST00000432907 FEZ1Q99689 392 aa12.31□□□□□ -0.44
PKNOX1-203ENST00000432907 CYP46A1Q9Y6A2 500 aa12.31□□□□□ -0.44
PKNOX1-203ENST00000432907 CEP135Q66GS9 1140 aa12.3□□□□□ -0.44
PKNOX1-203ENST00000432907 TICAM2Q86XR7 235 aa12.3□□□□□ -0.44
PKNOX1-203ENST00000432907 TIAM1Q13009 1591 aa12.3□□□□□ -0.44
PKNOX1-203ENST00000432907 INCENPQ9NQS7 918 aa12.3□□□□□ -0.44
PKNOX1-203ENST00000432907 CT47A1Q5JQC4 288 aaPredicted RBP12.3□□□□□ -0.44
PKNOX1-203ENST00000432907 CTR9Q6PD62 1173 aa12.3□□□□□ -0.44
PKNOX1-203ENST00000432907 NECTIN2Q92692 538 aa12.3□□□□□ -0.44
PKNOX1-203ENST00000432907 NEMFO60524 1076 aa12.3□□□□□ -0.44
PKNOX1-203ENST00000432907 OGFRQ9NZT2 677 aa12.3□□□□□ -0.44
PKNOX1-203ENST00000432907 MYO6Q9UM54 1294 aa12.3□□□□□ -0.44
PKNOX1-203ENST00000432907 G3BP1Q13283 466 aaKnown RBP eCLIP12.29□□□□□ -0.44
PKNOX1-203ENST00000432907 PAXIP1Q6ZW49 1069 aaPredicted RBP12.29□□□□□ -0.44
PKNOX1-203ENST00000432907 ZSCAN12O43309 604 aa12.29□□□□□ -0.44
PKNOX1-203ENST00000432907 C8orf34Q49A92 452 aa12.29□□□□□ -0.44
PKNOX1-203ENST00000432907 ODF2Q5BJF6 829 aa12.29□□□□□ -0.44
PKNOX1-203ENST00000432907 FBXO3Q9UK99 471 aa12.29□□□□□ -0.44
PKNOX1-203ENST00000432907 CCDC181Q5TID7 509 aa12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 WWC1Q8IX03 1113 aa12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 MTHFSP49914 203 aa12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 ARHGAP29Q52LW3 1261 aa12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 NFXL1Q6ZNB6 911 aa12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 TTC12Q9H892 705 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 RASSF4Q9H2L5 321 aa12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 GDPD2Q9HCC8 539 aa12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 LRRFIP2Q9Y608 721 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 EVC2Q86UK5 1308 aa12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 SMARCC1Q92922 1105 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
PKNOX1-203ENST00000432907 HCLS1P14317 486 aaPredicted RBP12.27□□□□□ -0.44
PKNOX1-203ENST00000432907 CFAP100Q494V2 611 aa12.27□□□□□ -0.44
PKNOX1-203ENST00000432907 IVLP07476 585 aa12.27□□□□□ -0.44
PKNOX1-203ENST00000432907 TERF1P54274 439 aa12.27□□□□□ -0.44
PKNOX1-203ENST00000432907 C10orf67Q8IYJ2 551 aa12.27□□□□□ -0.44
PKNOX1-203ENST00000432907 CFAP45Q9UL16 551 aa12.27□□□□□ -0.44
PKNOX1-203ENST00000432907 EIF2S2P20042 333 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-203ENST00000432907 STK3Q13188 491 aa12.27□□□□□ -0.45
PKNOX1-203ENST00000432907 IQCEQ6IPM2 695 aa12.27□□□□□ -0.45
PKNOX1-203ENST00000432907 WDR63Q8IWG1 891 aa12.27□□□□□ -0.45
PKNOX1-203ENST00000432907 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.45
PKNOX1-203ENST00000432907 CASQ1P31415 396 aa12.27□□□□□ -0.45
PKNOX1-203ENST00000432907 AMPHP49418 695 aa12.27□□□□□ -0.45
PKNOX1-203ENST00000432907 ZRSR2Q15696 482 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-203ENST00000432907 FAM177BA6PVY3 158 aa12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 SMTNL1A8MU46 457 aa12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 SURF6O75683 361 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 UBTFL1P0CB47 393 aaPredicted RBP12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 MAP9Q49MG5 647 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms