RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 CCDC9Q9Y3X0 531 aaKnown RBP25.52■■□□□ 1.68
DDR1-236ENST00000431373 KNSTRNQ9Y448 316 aa25.52■■□□□ 1.68
DDR1-236ENST00000431373 COL5A2P05997 1499 aaPredicted RBP25.52■■□□□ 1.68
DDR1-236ENST00000431373 CDK12Q9NYV4 1490 aaPredicted RBP25.52■■□□□ 1.68
DDR1-236ENST00000431373 STRN4Q9NRL3 753 aa25.51■■□□□ 1.67
DDR1-236ENST00000431373 NSD2O96028 1365 aa25.51■■□□□ 1.67
DDR1-236ENST00000431373 EVA1CP58658 441 aa25.5■■□□□ 1.67
DDR1-236ENST00000431373 AXIN2Q9Y2T1 843 aa25.48■■□□□ 1.67
DDR1-236ENST00000431373 MAP2P11137 1827 aaKnown RBP25.47■■□□□ 1.67
DDR1-236ENST00000431373 MAP3K19Q56UN5 1328 aa25.46■■□□□ 1.67
DDR1-236ENST00000431373 SPATA31A5Q5VU36 1347 aa25.46■■□□□ 1.67
DDR1-236ENST00000431373 SPATA31A7Q8IWB4 1347 aa25.46■■□□□ 1.67
DDR1-236ENST00000431373 PER1O15534 1290 aaPredicted RBP25.46■■□□□ 1.67
DDR1-236ENST00000431373 FBLN1P23142 703 aa25.46■■□□□ 1.67
DDR1-236ENST00000431373 RGS12O14924 1447 aa25.46■■□□□ 1.67
DDR1-236ENST00000431373 AMER1Q5JTC6 1135 aaPredicted RBP25.44■■□□□ 1.66
DDR1-236ENST00000431373 LARP1Q6PKG0 1096 aaKnown RBP25.44■■□□□ 1.66
DDR1-236ENST00000431373 BLMP54132 1417 aaPredicted RBP25.44■■□□□ 1.66
DDR1-236ENST00000431373 RRS1Q15050 365 aaKnown RBP25.43■■□□□ 1.66
DDR1-236ENST00000431373 IP6K1Q92551 441 aa25.43■■□□□ 1.66
DDR1-236ENST00000431373 RTL1A6NKG5 1358 aa25.43■■□□□ 1.66
DDR1-236ENST00000431373 SPATA31A1Q5TZJ5 1347 aa25.42■■□□□ 1.66
DDR1-236ENST00000431373 AMPHP49418 695 aa25.42■■□□□ 1.66
DDR1-236ENST00000431373 CRB1P82279 1406 aa25.42■■□□□ 1.66
DDR1-236ENST00000431373 PEAK1Q9H792 1746 aa25.42■■□□□ 1.66
DDR1-236ENST00000431373 WDR17Q8IZU2 1322 aa25.41■■□□□ 1.66
DDR1-236ENST00000431373 FAM208AQ9UK61 1670 aaKnown RBP25.4■■□□□ 1.66
DDR1-236ENST00000431373 HOXC9P31274 260 aa25.4■■□□□ 1.66
DDR1-236ENST00000431373 MORC1Q86VD1 984 aa25.4■■□□□ 1.66
DDR1-236ENST00000431373 CSB-PGBD3P0DP91 1061 aa25.39■■□□□ 1.66
DDR1-236ENST00000431373 KIF24Q5T7B8 1368 aa25.39■■□□□ 1.65
DDR1-236ENST00000431373 BRWD3Q6RI45 1802 aa25.39■■□□□ 1.65
DDR1-236ENST00000431373 ERBB3P21860 1342 aa25.38■■□□□ 1.65
DDR1-236ENST00000431373 TOM1L2Q6ZVM7 507 aa25.38■■□□□ 1.65
DDR1-236ENST00000431373 USP35Q9P2H5 1018 aa25.38■■□□□ 1.65
DDR1-236ENST00000431373 NPC1L1Q9UHC9 1359 aa25.38■■□□□ 1.65
DDR1-236ENST00000431373 THSD7AQ9UPZ6 1657 aa25.37■■□□□ 1.65
DDR1-236ENST00000431373 ONECUT3O60422 494 aaPredicted RBP25.37■■□□□ 1.65
DDR1-236ENST00000431373 TNNT2P45379 298 aaPredicted RBP25.37■■□□□ 1.65
DDR1-236ENST00000431373 FAM98CQ17RN3 349 aaKnown RBP25.37■■□□□ 1.65
DDR1-236ENST00000431373 ANKRD24Q8TF21 1146 aa25.37■■□□□ 1.65
DDR1-236ENST00000431373 WNK3Q9BYP7 1800 aa25.37■■□□□ 1.65
DDR1-236ENST00000431373 FLT4P35916 1363 aa25.36■■□□□ 1.65
DDR1-236ENST00000431373 EMILIN1Q9Y6C2 1016 aa25.36■■□□□ 1.65
DDR1-236ENST00000431373 TCP11L2Q8N4U5 519 aa25.35■■□□□ 1.65
DDR1-236ENST00000431373 THRAP3Q9Y2W1 955 aaKnown RBP25.35■■□□□ 1.65
DDR1-236ENST00000431373 CC2D1BQ5T0F9 858 aaKnown RBP25.34■■□□□ 1.65
DDR1-236ENST00000431373 SEPT12Q8IYM1 358 aa25.34■■□□□ 1.65
DDR1-236ENST00000431373 RGPD2P0DJD1 1756 aa25.33■■□□□ 1.65
DDR1-236ENST00000431373 A0A0G2JS52 829 aa25.33■■□□□ 1.65
DDR1-236ENST00000431373 MYT1Q01538 1121 aa25.33■■□□□ 1.65
DDR1-236ENST00000431373 BARGINQ6ZT62 677 aa25.33■■□□□ 1.65
DDR1-236ENST00000431373 CARD10Q9BWT7 1032 aa25.33■■□□□ 1.65
DDR1-236ENST00000431373 POLKQ9UBT6 870 aa25.33■■□□□ 1.65
DDR1-236ENST00000431373 INSRP06213 1382 aa25.32■■□□□ 1.64
DDR1-236ENST00000431373 PPM1GO15355 546 aaPredicted RBP25.32■■□□□ 1.64
DDR1-236ENST00000431373 LTV1Q96GA3 475 aaPredicted RBP25.32■■□□□ 1.64
DDR1-236ENST00000431373 NLRP2Q9NX02 1062 aa25.31■■□□□ 1.64
DDR1-236ENST00000431373 PARP4Q9UKK3 1724 aaKnown RBP25.31■■□□□ 1.64
DDR1-236ENST00000431373 SMG6Q86US8 1419 aaKnown RBP25.3■■□□□ 1.64
DDR1-236ENST00000431373 HSP90AB2PQ58FF8 381 aa25.3■■□□□ 1.64
DDR1-236ENST00000431373 CNGB1Q14028 1251 aaPredicted RBP25.29■■□□□ 1.64
DDR1-236ENST00000431373 DDX10Q13206 875 aaKnown RBP25.28■■□□□ 1.64
DDR1-236ENST00000431373 LRRC37A3O60309 1634 aa25.25■■□□□ 1.63
DDR1-236ENST00000431373 ZNF316A6NFI3 1004 aaPredicted RBP25.24■■□□□ 1.63
DDR1-236ENST00000431373 DISP2A7MBM2 1401 aa25.23■■□□□ 1.63
DDR1-236ENST00000431373 KRT27Q7Z3Y8 459 aa25.23■■□□□ 1.63
DDR1-236ENST00000431373 CDCA7Q9BWT1 371 aaPredicted RBP25.23■■□□□ 1.63
DDR1-236ENST00000431373 NBPF6Q5VWK0 638 aa25.2■■□□□ 1.62
DDR1-236ENST00000431373 NBPF4Q96M43 638 aa25.2■■□□□ 1.62
DDR1-236ENST00000431373 IL2RBP14784 551 aa25.18■■□□□ 1.62
DDR1-236ENST00000431373 MTHFSP49914 203 aa25.18■■□□□ 1.62
DDR1-236ENST00000431373 PDE3BQ13370 1112 aa25.17■■□□□ 1.62
DDR1-236ENST00000431373 EIF4A2Q14240 407 aaKnown RBP25.17■■□□□ 1.62
DDR1-236ENST00000431373 DDB1Q16531 1140 aa25.17■■□□□ 1.62
DDR1-236ENST00000431373 USHBP1Q8N6Y0 703 aa25.15■■□□□ 1.62
DDR1-236ENST00000431373 NCAPD2Q15021 1401 aa25.14■■□□□ 1.62
DDR1-236ENST00000431373 TNS2Q63HR2 1409 aa25.14■■□□□ 1.62
DDR1-236ENST00000431373 EXOC5O00471 708 aa25.13■■□□□ 1.61
DDR1-236ENST00000431373 EYA1Q99502 592 aa25.13■■□□□ 1.61
DDR1-236ENST00000431373 PARD3Q8TEW0 1356 aa25.13■■□□□ 1.61
DDR1-236ENST00000431373 FAM182BQ5T319 152 aa25.12■■□□□ 1.61
DDR1-236ENST00000431373 RGPD1P0DJD0 1748 aa25.12■■□□□ 1.61
DDR1-236ENST00000431373 MEGF6O75095 1541 aa25.12■■□□□ 1.61
DDR1-236ENST00000431373 UPF1Q92900 1129 aaKnown RBP eCLIP25.11■■□□□ 1.61
DDR1-236ENST00000431373 EP400Q96L91 3159 aa25.11■■□□□ 1.61
DDR1-236ENST00000431373 PPP2R1AP30153 589 aa25.1■■□□□ 1.61
DDR1-236ENST00000431373 RAPGEF4Q8WZA2 1011 aa25.1■■□□□ 1.61
DDR1-236ENST00000431373 OVOS2A0A0G2JMS6 1433 aa25.1■■□□□ 1.61
DDR1-236ENST00000431373 SHANK3Q9BYB0 1731 aa25.09■■□□□ 1.61
DDR1-236ENST00000431373 IGSF1Q8N6C5 1336 aa25.09■■□□□ 1.61
DDR1-236ENST00000431373 COL3A1P02461 1466 aaPredicted RBP25.08■■□□□ 1.6
DDR1-236ENST00000431373 TATP17735 454 aaPredicted RBP25.07■■□□□ 1.6
DDR1-236ENST00000431373 IL13P35225 146 aa25.07■■□□□ 1.6
DDR1-236ENST00000431373 FAM196AQ6ZSG2 479 aa25.07■■□□□ 1.6
DDR1-236ENST00000431373 SBF2Q86WG5 1849 aa25.07■■□□□ 1.6
DDR1-236ENST00000431373 MARCH10Q8NA82 808 aaPredicted RBP25.06■■□□□ 1.6
DDR1-236ENST00000431373 PKD1L3Q7Z443 1732 aa25.06■■□□□ 1.6
DDR1-236ENST00000431373 DIAPH1O60610 1272 aaKnown RBP25.05■■□□□ 1.6
DDR1-236ENST00000431373 RALBP1Q15311 655 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms